Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 7.8e-86 320.5 167 100.0
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 4.6e-54 214.9 184 67.4
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 6.7e-53 211.1 174 69.5
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.5e-52 209.1 174 71.3
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 8.2e-51 204.1 174 69.0
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 1.0e-45 187.2 173 63.0
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 4.3e-44 181.8 170 60.0
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 5.7e-44 181.4 170 60.0
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 2.2e-43 179.5 170 59.4
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.1e-42 177.2 174 60.9
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 3.1e-42 175.6 172 60.5
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.5e-41 173.3 177 58.8
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 3.4e-41 172.2 171 61.4
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.0e-40 170.6 188 56.9
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 1.0e-40 170.6 250 48.8
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 5.0e-40 168.3 174 56.9
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 1.4e-39 166.8 181 58.0
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 5.5e-39 164.9 174 58.0
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 5.5e-39 164.9 170 59.4
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 7.9e-38 161.0 172 57.0
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 1.0e-37 160.6 137 64.2
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.4e-37 160.2 175 56.0
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 3.9e-37 158.7 172 58.7
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 4.3e-36 155.2 166 52.4
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 4.3e-36 155.2 170 59.4
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 4.3e-36 155.2 173 59.5
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 2.2e-35 152.9 181 53.0
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 8.2e-35 151.0 171 56.1
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 8.2e-35 151.0 176 55.7
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 8.2e-35 151.0 168 52.4
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 1.1e-34 150.6 170 57.1
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 1.1e-34 150.6 175 51.4
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 2.4e-34 149.4 169 57.4
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 3.1e-34 149.1 171 53.8
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 4.1e-34 148.7 171 53.8
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 6.9e-34 147.9 174 51.7
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 2.0e-33 146.4 169 53.3
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 2.0e-33 146.4 166 54.8
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 2.6e-33 146.0 170 51.2
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.6e-33 146.0 173 53.8
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.6e-33 146.0 173 53.8
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 3.4e-33 145.6 169 55.0
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 3.4e-33 145.6 173 50.9
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 7.7e-33 144.4 175 52.0
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 1.0e-32 144.1 172 52.9
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.7e-32 143.3 169 57.4
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 2.2e-32 142.9 171 56.7
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 2.2e-32 142.9 171 50.9
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 2.9e-32 142.5 169 52.7
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 2.9e-32 142.5 171 55.6
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 3.8e-32 142.1 150 61.3
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 1.4e-31 140.2 170 52.9
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 1.4e-31 140.2 170 52.9
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.4e-31 140.2 166 56.0
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.9e-31 139.8 173 54.9
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 3.2e-31 139.0 170 51.2
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 3.2e-31 139.0 170 51.2
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 5.5e-31 138.3 217 44.2
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 7.2e-31 137.9 175 49.7
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 7.2e-31 137.9 175 49.7
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 9.4e-31 137.5 170 48.8
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 1.2e-30 137.1 171 52.0
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 1.2e-30 137.1 171 52.6
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.6e-30 136.7 170 51.2
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 2.7e-30 136.0 174 51.1
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 3.6e-30 135.6 168 54.8
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 7.9e-30 134.4 165 50.9
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 1.0e-29 134.0 170 51.8
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.0e-29 134.0 178 49.4
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 1.4e-29 133.7 172 52.9
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.4e-29 133.7 172 50.6
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 1.4e-29 133.7 95 74.7
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 3.0e-29 132.5 165 50.3
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 2.0e-28 129.8 178 50.0
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 4.4e-28 128.6 182 51.1
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 9.7e-28 127.5 170 47.6
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 1.7e-27 126.7 173 48.6
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 4.8e-27 125.2 164 48.8
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 4.8e-27 125.2 164 48.8
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 4.1e-26 122.1 176 46.6
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.1e-26 122.1 170 50.0
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 5.3e-26 121.7 141 59.6
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 9.1e-26 120.9 171 51.5
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 9.1e-26 120.9 170 49.4
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.4e-25 119.0 170 49.4
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 4.5e-25 118.6 168 49.4
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.5e-25 118.6 168 49.4
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.9e-25 118.2 168 49.4
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 5.9e-25 118.2 139 54.0
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 5.9e-25 118.2 170 51.2
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 1.3e-24 117.1 181 45.9
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 1.3e-24 117.1 122 55.7
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 7.2e-23 111.3 168 49.4
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 2.7e-22 109.4 86 65.1
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 6.1e-22 108.2 95 61.1
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.1e-20 104.0 144 47.2
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 1.1e-20 104.0 165 46.7
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 1.1e-20 104.0 177 45.2
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 8.2e-19 97.8 141 46.8
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 9.1e-18 94.4 55 83.6
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 2.6e-17 92.8 144 45.8
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 4.5e-17 92.0 62 74.2
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 5.9e-17 91.7 185 38.9
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 5.9e-17 91.7 93 53.8
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 1.7e-16 90.1 141 45.4
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 1.7e-16 90.1 177 41.8
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 6.5e-16 88.2 111 53.2
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 7.2e-15 84.7 66 66.7
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 6.1e-14 81.6 187 39.0
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 4.0e-13 79.0 144 44.4
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 1.2e-12 77.4 70 58.6
SGA_v2.0_scaffold111G31380 Striga asiatica HOM05D006875 ORTHO05D008416 2.2e-11 73.2 142 39.4
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 2.8e-11 72.8 45 77.8
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 6.3e-11 71.6 77 50.6
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 4.1e-10 68.9 136 42.6
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 5.3e-10 68.6 75 52.0
DCAR_004255 Daucus carota HOM05D049898 ORTHO05D008416 8.5e-08 61.2 114 45.6


User provided reference genes

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