Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28942 Davidia involucrata HOM05D007324 ORTHO05D007884 1.6e-42 176.0 110 100.0
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 1.0e-17 93.6 124 49.2
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 1.7e-17 92.8 116 50.9
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 1.4e-14 83.2 112 45.5
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 2.6e-13 79.0 118 47.5
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 2.6e-13 79.0 120 43.3
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 3.4e-13 78.6 120 42.5
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 5.8e-13 77.8 126 43.7
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 2.2e-12 75.9 136 40.4
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 3.8e-12 75.1 129 43.4
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 4.9e-12 74.7 118 45.8
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.1e-11 73.6 126 42.1
Actinidia09218 Actinidia chinensis HOM05D007324 ORTHO05D007884 2.4e-11 72.4 116 58.6
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 3.2e-11 72.0 134 39.6
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 1.2e-10 70.1 114 41.2
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 1.6e-10 69.7 114 41.2
Peaxi162Scf00615g00021 Petunia axillaris HOM05D007324 ORTHO05D007884 2.1e-10 69.3 116 58.6
Dinv25203 Davidia involucrata HOM05D007324 ORTHO05D007884 2.7e-10 68.9 125 56.8
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 4.6e-10 68.2 148 37.2
Peaxi162Scf00460g00044 Petunia axillaris HOM05D007324 ORTHO05D007884 2.3e-09 65.9 116 53.4
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 3.0e-09 65.5 121 38.8
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 5.1e-09 64.7 120 45.8
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 6.6e-09 64.3 126 40.5
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.1e-08 63.5 142 36.6
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 1.5e-08 63.2 123 39.0
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 1.5e-08 63.2 123 39.0
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.5e-08 63.2 111 50.5
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 1.5e-08 63.2 128 39.1
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.5e-08 63.2 120 38.3
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 1.9e-08 62.8 95 42.1
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 5.6e-08 61.2 91 50.5
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 5.6e-08 61.2 136 39.0
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 1.3e-07 60.1 129 44.2
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 1.6e-07 59.7 118 37.3
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 2.8e-07 58.9 88 45.5
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 3.6e-07 58.5 118 36.4
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 3.6e-07 58.5 118 36.4
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 6.2e-07 57.8 113 41.6
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 8.1e-07 57.4 133 45.1
CANSAT21G2393 Cannabis sativa HOM05D007324 ORTHO05D007884 1.4e-06 56.6 132 51.5
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 2.4e-06 55.8 118 41.5
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 5.3e-06 54.7 101 36.6
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 6.9e-06 54.3 109 39.4
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 9.0e-06 53.9 131 33.6


User provided reference genes

Program Settings