Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 2.8e-196 688.3 327 100.0
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 7.7e-154 547.4 324 79.0
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 1.0e-150 537.0 321 80.7
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.0e-150 537.0 306 81.4
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.4e-150 536.6 306 81.0
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 1.4e-139 500.0 289 81.7
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 1.8e-139 499.6 323 73.1
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 2.2e-137 492.7 319 72.4
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 1.5e-136 490.0 290 78.6
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 2.5e-136 489.2 317 72.2
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 4.7e-135 485.0 311 73.0
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 8.0e-135 484.2 337 68.8
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 1.0e-134 483.8 320 71.2
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 6.8e-134 481.1 301 73.4
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 8.8e-134 480.7 300 72.7
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 1.7e-132 476.5 319 69.6
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 2.8e-132 475.7 300 74.0
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 1.4e-131 473.4 294 72.8
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 4.1e-131 471.9 301 71.8
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 5.4e-131 471.5 300 71.3
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 5.4e-131 471.5 298 73.2
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 3.5e-130 468.8 300 71.7
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 3.5e-130 468.8 300 71.7
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 3.5e-130 468.8 433 56.6
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 1.3e-129 466.8 307 71.7
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 1.7e-129 466.5 293 72.7
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 8.6e-129 464.2 296 72.3
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 4.2e-128 461.8 289 73.7
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 2.8e-127 459.1 321 67.0
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 3.6e-127 458.8 316 67.7
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 1.2e-125 453.8 314 68.2
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 1.5e-125 453.4 318 65.4
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 1.5e-125 453.4 317 65.3
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 2.0e-125 453.0 305 70.2
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 2.0e-125 453.0 350 62.6
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 4.4e-125 451.8 320 67.8
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 7.5e-125 451.1 323 65.0
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 3.7e-124 448.7 324 67.6
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 6.3e-124 448.0 318 65.7
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 6.3e-124 448.0 316 67.1
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 1.1e-123 447.2 288 72.2
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 1.8e-123 446.4 295 69.8
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 7.0e-123 444.5 307 68.7
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 9.2e-123 444.1 313 67.1
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 1.2e-122 443.7 312 66.3
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 3.5e-122 442.2 300 69.3
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 3.5e-122 442.2 295 68.8
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 4.5e-122 441.8 310 66.5
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 4.5e-122 441.8 316 66.1
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 7.8e-122 441.0 316 66.8
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 2.9e-121 439.1 293 70.3
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 8.6e-121 437.6 444 53.2
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 1.5e-120 436.8 309 67.6
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 2.5e-120 436.0 306 68.3
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 3.3e-120 435.6 320 63.1
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 9.5e-120 434.1 310 65.8
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 6.1e-119 431.4 316 66.1
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 8.0e-119 431.0 306 67.3
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 1.8e-118 429.9 316 65.8
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 6.8e-118 427.9 304 68.8
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 8.9e-118 427.6 305 66.9
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 2.6e-117 426.0 316 63.3
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 3.4e-117 425.6 309 65.0
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 1.3e-116 423.7 291 66.7
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 2.9e-116 422.5 306 63.7
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 2.9e-116 422.5 311 64.3
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 5.4e-115 418.3 311 62.7
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 7.0e-115 417.9 331 62.2
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 9.2e-115 417.5 310 67.4
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 9.2e-115 417.5 294 65.6
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 1.2e-114 417.2 298 66.1
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 1.3e-113 413.7 289 64.7
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.3e-113 413.7 294 65.3
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 5.0e-113 411.8 294 65.6
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 8.6e-113 411.0 293 64.2
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 1.1e-112 410.6 289 64.4
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.1e-112 410.6 300 63.7
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.5e-112 410.2 263 72.6
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 3.3e-112 409.1 289 64.7
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 5.6e-112 408.3 338 58.9
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 1.6e-111 406.8 290 65.5
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 2.1e-111 406.4 281 67.3
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 2.1e-111 406.4 289 63.0
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 6.2e-111 404.8 289 63.3
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 1.4e-110 403.7 289 62.6
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 1.4e-110 403.7 289 62.6
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 2.3e-110 402.9 289 63.0
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 5.2e-110 401.7 291 63.6
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 3.4e-109 399.1 289 62.6
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 2.2e-108 396.4 289 61.9
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 7.3e-104 381.3 292 61.6
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 1.4e-102 377.1 279 62.7
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 8.9e-102 374.4 299 59.5
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 2.6e-101 372.9 301 59.8
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 9.6e-96 354.4 306 58.5
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 9.6e-96 354.4 316 53.8
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 2.8e-95 352.8 310 55.2
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 8.4e-92 341.3 290 55.2
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 2.9e-84 316.2 234 64.5
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 5.4e-83 312.0 322 46.3
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 1.9e-72 276.9 326 41.7
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 1.2e-69 267.7 179 67.0
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.5e-67 260.0 295 43.7
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 9.0e-62 241.5 150 72.7
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.3e-60 237.7 286 42.7
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 8.5e-52 208.4 258 41.9
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 5.9e-45 185.7 134 67.2
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 1.4e-38 164.5 119 66.4
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 3.8e-36 156.4 91 69.2
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.5e-11 74.7 70 55.7
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 7.0e-06 55.8 81 37.0


User provided reference genes

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