Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28934 Davidia involucrata HOM05D007142 ORTHO05D008983 1.2e-137 493.0 232 100.0
GSVIVG01013184001 Vitis vinifera HOM05D007142 ORTHO05D008983 2.8e-118 428.7 232 87.1
COL.COLO4_17070 Corchorus olitorius HOM05D007142 ORTHO05D008983 1.2e-116 423.3 235 87.2
Potri.003G089900 Populus trichocarpa HOM05D007142 ORTHO05D008983 4.2e-114 414.8 233 85.8
TAR629G1364 Trochodendron aralioides HOM05D007142 ORTHO05D008983 4.2e-114 414.8 233 85.4
Ah.12g054590 Amaranthus hybridus HOM05D007142 ORTHO05D008983 4.7e-113 411.4 232 82.8
EL10Ac5g12171 Beta vulgaris HOM05D007142 ORTHO05D008983 4.7e-113 411.4 232 82.3
Thecc.03G230800 Theobroma cacao HOM05D007142 ORTHO05D008983 4.7e-113 411.4 234 82.9
Duzib205G0350 Durio zibethinus HOM05D007142 ORTHO05D008983 6.1e-113 411.0 235 84.7
Actinidia25952 Actinidia chinensis HOM05D007142 ORTHO05D008983 1.5e-111 406.4 229 84.3
Manes.17G016003 Manihot esculenta HOM05D007142 ORTHO05D008983 5.7e-111 404.4 236 81.4
QL12p006204 Quercus lobata HOM05D007142 ORTHO05D008983 5.7e-111 404.4 230 82.6
Gorai.004G186600 Gossypium raimondii HOM05D007142 ORTHO05D008983 2.2e-110 402.5 236 83.1
Gohir.D08G178400 Gossypium hirsutum HOM05D007142 ORTHO05D008983 6.3e-110 401.0 236 82.6
TWI15G0113 Tripterygium wilfordii HOM05D007142 ORTHO05D008983 6.3e-110 401.0 232 82.8
vmacro00342 Vaccinium macrocarpon HOM05D007142 ORTHO05D008983 6.3e-110 401.0 230 82.6
VMungo0251G3176 Vigna mungo HOM05D007142 ORTHO05D008983 6.3e-110 401.0 230 82.2
Cc08_g02450 Coffea canephora HOM05D007142 ORTHO05D000161 8.2e-110 400.6 234 81.2
Haze_08264 Corylus avellana HOM05D007142 ORTHO05D008983 1.1e-109 400.2 233 83.3
TPR.G28665 Trifolium pratense HOM05D007142 ORTHO05D008983 1.1e-109 400.2 233 81.1
MD06G1031800 Malus domestica HOM05D007142 ORTHO05D008983 1.8e-109 399.4 235 80.9
CiPaw.11G091400 Carya illinoinensis HOM05D007142 ORTHO05D008983 3.1e-109 398.7 232 81.9
AUR62018753 Chenopodium quinoa HOM05D007142 ORTHO05D008983 3.5e-108 395.2 233 79.8
CANSAT21G2079 Cannabis sativa HOM05D007142 ORTHO05D008983 7.7e-108 394.0 226 82.3
Eucgr.D02183 Eucalyptus grandis HOM05D007142 ORTHO05D008983 7.7e-108 394.0 234 80.8
Phvul.003G229700 Phaseolus vulgaris HOM05D007142 ORTHO05D008983 1.3e-107 393.3 230 80.0
Glyma.17G154151 Glycine max HOM05D007142 ORTHO05D008983 2.2e-107 392.5 230 80.9
Medtr4g098620 Medicago truncatula HOM05D007142 ORTHO05D008983 2.9e-107 392.1 233 79.4
Nitab4.5_0003100g0010 Nicotiana tabacum HOM05D007142 ORTHO05D008983 2.9e-107 392.1 219 84.9
Prupe.5G040300 Prunus persica HOM05D007142 ORTHO05D008983 2.9e-107 392.1 234 80.8
Sabra03G0059800 Salix brachista HOM05D007142 ORTHO05D008983 2.9e-107 392.1 255 76.9
Atru.chr6.1752 Acer truncatum HOM05D007142 ORTHO05D008983 3.8e-107 391.7 234 79.5
Aqoxy3G02453 Aquilegia oxysepala HOM05D007142 ORTHO05D008983 3.8e-107 391.7 232 79.3
FAN08G2513 Fragaria x ananassa HOM05D007142 ORTHO05D008983 1.5e-106 389.8 237 80.2
RcHm_v2.0_Chr7g0209181 Rosa chinensis HOM05D007142 ORTHO05D008983 5.5e-106 387.9 237 79.3
Ciclev10032530m.g Citrus clementina HOM05D007142 ORTHO05D008983 9.4e-106 387.1 236 79.2
CAN.G201.17 Capsicum annuum HOM05D007142 ORTHO05D008983 2.1e-105 386.0 238 78.6
Nitab4.5_0014378g0020 Nicotiana tabacum HOM05D007142 ORTHO05D008983 2.1e-105 386.0 236 79.7
FvH4_5g21680 Fragaria vesca HOM05D007142 ORTHO05D008983 6.1e-105 384.4 223 82.5
Psat4g079200 Pisum sativum HOM05D007142 ORTHO05D008983 1.0e-104 383.6 235 78.7
DCAR_032211 Daucus carota HOM05D007142 ORTHO05D008983 1.8e-104 382.9 234 76.9
Lj4g0022330 Lotus japonicus HOM05D007142 ORTHO05D008983 1.8e-104 382.9 234 78.6
FAN18G0559 Fragaria x ananassa HOM05D007142 ORTHO05D008983 2.3e-104 382.5 223 82.1
Lalb_Chr09g0329501 Lupinus albus HOM05D007142 ORTHO05D008983 1.2e-103 380.2 216 83.3
PGR031G3753 Punica granatum HOM05D007142 ORTHO05D008983 2.0e-103 379.4 214 81.8
Cpa.g.sc665.3 Carica papaya HOM05D007142 ORTHO05D008983 5.7e-103 377.9 220 79.5
Sopen06g021290 Solanum pennellii HOM05D007142 ORTHO05D008983 2.2e-102 375.9 237 76.8
Solyc06g061090.3 Solanum lycopersicum HOM05D007142 ORTHO05D008983 2.8e-102 375.6 237 76.8
SGA_v2.0_scaffold4519G54498 Striga asiatica HOM05D007142 ORTHO05D008983 8.3e-102 374.0 224 80.4
ClCG10G001790 Citrullus lanatus HOM05D007142 ORTHO05D008983 1.8e-101 372.9 233 77.7
ECA246G1460 Erigeron canadensis HOM05D007142 ORTHO05D008983 4.1e-101 371.7 213 80.8
HanXRQChr17g0535721 Helianthus annuus HOM05D007142 ORTHO05D008983 4.1e-101 371.7 213 81.7
SalBow4G2536 Salvia bowleyana HOM05D007142 ORTHO05D008983 4.1e-101 371.7 231 76.6
CsaV3_3G001880 Cucumis sativus L. HOM05D007142 ORTHO05D008983 5.4e-101 371.3 236 77.5
Lsat_1_v5_gn_3_16621 Lactuca sativa HOM05D007142 ORTHO05D008983 9.1e-101 370.5 213 80.3
PSO384G0274 Papaver somniferum HOM05D007142 ORTHO05D008983 3.5e-100 368.6 243 75.3
arahy.Tifrunner.gnm1.ann1.J3YA34 Arachis hypogaea HOM05D007142 ORTHO05D008983 1.0e-99 367.1 234 75.2
PSO339G0102 Papaver somniferum HOM05D007142 ORTHO05D008983 2.9e-99 365.5 221 79.2
Migut.F01892 Erythranthe guttata HOM05D007142 ORTHO05D008983 3.8e-99 365.2 229 77.7
Peaxi162Scf00603g00413 Petunia axillaris HOM05D007142 ORTHO05D008983 5.0e-99 364.8 234 76.1
THA.LOC104807961 Tarenaya hassleriana HOM05D007142 ORTHO05D008983 5.0e-99 364.8 232 77.2
Aa31LG2G13430 Aethionema arabicum HOM05D007142 ORTHO05D008983 1.5e-98 363.2 237 76.8
Sc10g0005600 Simmondsia chinensis HOM05D007142 ORTHO05D008983 3.2e-98 362.1 219 79.5
MSTRG.9125 Avicennia marina HOM05D007142 ORTHO05D008983 5.5e-98 361.3 231 74.9
ATR0049G055 Amborella trichopoda HOM05D007142 ORTHO05D008983 1.2e-97 360.1 217 79.7
MELO3C013862.2 Cucumis melo HOM05D007142 ORTHO05D008983 2.1e-97 359.4 223 78.5
CARHR031970 Cardamine hirsuta HOM05D007142 ORTHO05D008983 6.1e-97 357.8 241 75.1
AT1G32520 Arabidopsis thaliana HOM05D007142 ORTHO05D008983 8.0e-97 357.5 241 75.9
CDE11G1210 Ceratophyllum demersum HOM05D007142 ORTHO05D008983 8.0e-97 357.5 234 73.1
A09p33690 Brassica napus HOM05D007142 ORTHO05D008983 1.4e-96 356.7 238 75.6
Thhalv10008641m.g Eutrema salsugineum HOM05D007142 ORTHO05D008983 3.0e-96 355.5 239 75.7
C05p31960 Brassica napus HOM05D007142 ORTHO05D008983 5.2e-96 354.8 238 75.2
BolC5t31922H Brassica oleracea HOM05D007142 ORTHO05D008983 5.2e-96 354.8 238 75.2
Sed0005643 Sechium edule HOM05D007142 ORTHO05D008983 5.2e-96 354.8 212 81.1
BraA09t38918Z Brassica rapa HOM05D007142 ORTHO05D008983 8.8e-96 354.0 238 75.2
BcaC05g27290 Brassica carinata HOM05D007142 ORTHO05D008983 1.5e-95 353.2 238 74.8
AUR62007246 Chenopodium quinoa HOM05D007142 ORTHO05D008983 1.3e-94 350.1 206 79.6
BcaB07g32947 Brassica carinata HOM05D007142 ORTHO05D008983 2.8e-94 349.0 223 76.7
HPP92_004467 Vanilla planifolia HOM05D007142 ORTHO05D008983 2.8e-94 349.0 235 70.6
AL1G46770 Arabidopsis lyrata HOM05D007142 ORTHO05D008983 8.3e-94 347.4 241 74.7
Carub.0001s3093 Capsella rubella HOM05D007142 ORTHO05D008983 1.1e-93 347.1 242 71.9
FAN04G2755 Fragaria x ananassa HOM05D007142 ORTHO05D008983 2.4e-93 345.9 238 73.9
HPP92_004488 Vanilla planifolia HOM05D007142 ORTHO05D008983 2.7e-92 342.4 235 69.4
Rhsim11G0012900 Rhododendron simsii HOM05D007142 ORTHO05D008983 2.5e-90 335.9 179 87.2
Zm00001eb090700 Zea mays HOM05D007142 ORTHO05D008983 3.0e-88 328.9 221 67.9
Lj2C242T12 Lonicera japonica HOM05D007142 ORTHO05D008983 3.4e-87 325.5 184 84.8
Nn6g33627 Nelumbo nucifera HOM05D007142 ORTHO05D008983 2.9e-86 322.4 175 88.6
PGSC0003DMG400002104 Solanum tuberosum HOM05D007142 ORTHO05D008983 3.7e-86 322.0 196 79.1
Mapoly0005s0008 Marchantia polymorpha HOM05D007142 ORTHO05D008983 1.1e-85 320.5 220 68.6
FAN13G1057 Fragaria x ananassa HOM05D007142 ORTHO05D008983 2.4e-85 319.3 198 78.8
Sp1g28380 Schrenkiella parvula HOM05D007142 ORTHO05D008983 3.2e-85 318.9 203 78.8
unitig_32.g11901 Utricularia gibba HOM05D007142 ORTHO05D008983 3.6e-81 305.4 181 80.1
MBI04_g22954_MAGBIO Magnolia biondii HOM05D007142 ORTHO05D008983 5.2e-80 301.6 173 84.4
AagrBONN_evm.TU.Sc2ySwM_362.655 Anthoceros agrestis HOM05D007142 ORTHO05D008983 6.8e-80 301.2 209 69.4
arahy.Tifrunner.gnm1.ann1.KYR2NU Arachis hypogaea HOM05D007142 ORTHO05D008983 4.9e-78 295.0 232 64.7
SEGI_34411 Sequoiadendron giganteum HOM05D007142 ORTHO05D008983 1.3e-75 287.0 198 69.2
Gohir.A08G158100 Gossypium hirsutum HOM05D007142 ORTHO05D008983 2.5e-74 282.7 180 76.1
Os11g0220300 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 3.1e-48 196.1 146 61.6
SMO367G0110 Selaginella moellendorffii HOM05D007142 ORTHO05D008983 2.9e-46 189.5 128 71.1
PRCOL_00005169 Prasinoderma coloniale HOM05D007142 ORTHO05D008983 3.2e-45 186.0 191 50.8
MCO11G179 Micromonas commoda HOM05D007142 ORTHO05D008983 1.8e-32 143.7 185 43.2
Os07g0120051 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 7.1e-29 131.7 125 54.4
Hma1.2p1_0585F.1_g183620 Hydrangea macrophylla HOM05D007142 ORTHO05D008983 2.2e-25 120.2 62 93.5
Glyma.05G112900 Glycine max HOM05D007142 ORTHO05D008983 2.9e-22 109.8 190 39.5
Dinv25200 Davidia involucrata HOM05D007142 ORTHO05D008983 3.8e-22 109.4 153 44.4
Oeu029960.1 Olea europaea HOM05D007142 ORTHO05D008983 9.4e-21 104.8 62 82.3
Cre10.g446500 Chlamydomonas reinhardtii HOM05D007142 ORTHO05D008983 1.9e-18 97.1 177 35.6
MCO05G635 Micromonas commoda HOM05D007142 ORTHO05D008983 3.2e-13 79.7 171 29.2
Os06g0318400 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 4.4e-10 69.3 63 52.4
Os11g0275900 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 1.5e-07 60.8 45 68.9


User provided reference genes

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