Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 2.1e-126 455.7 225 100.0
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 7.0e-98 360.9 229 78.6
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.6e-97 359.8 224 79.0
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.7e-97 359.0 229 78.2
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 3.9e-96 355.1 228 78.5
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 3.7e-91 338.6 212 78.8
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 2.4e-90 335.9 213 76.5
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 5.4e-90 334.7 214 74.8
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 7.8e-89 330.9 227 72.2
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.7e-88 329.7 233 70.4
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 5.0e-88 328.2 225 71.6
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 8.6e-88 327.4 236 70.3
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 4.3e-87 325.1 226 69.0
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 8.1e-86 320.9 232 68.1
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 1.1e-85 320.5 212 74.1
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 1.8e-85 319.7 219 74.0
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 1.8e-85 319.7 217 73.7
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 2.3e-85 319.3 227 70.0
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 5.2e-85 318.2 214 70.6
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 5.2e-85 318.2 212 73.6
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 6.8e-85 317.8 223 72.6
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 7.5e-84 314.3 223 68.2
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.3e-83 313.5 228 70.2
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 1.3e-83 313.5 222 71.2
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 2.2e-83 312.8 214 71.0
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 2.9e-83 312.4 226 70.8
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 4.9e-83 311.6 210 74.3
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 4.9e-83 311.6 225 69.3
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 8.3e-83 310.8 229 69.9
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 8.3e-83 310.8 214 70.6
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 1.1e-82 310.5 228 69.3
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.1e-82 310.5 220 69.1
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 1.4e-82 310.1 224 68.3
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 2.4e-82 309.3 225 69.3
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 3.2e-82 308.9 225 70.2
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 3.2e-82 308.9 221 67.0
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 4.1e-82 308.5 234 66.7
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 4.1e-82 308.5 285 58.6
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 5.4e-82 308.1 225 68.0
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 9.2e-82 307.4 211 70.6
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 9.2e-82 307.4 231 67.1
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 9.2e-82 307.4 227 68.3
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.2e-81 307.0 217 71.4
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 1.2e-81 307.0 214 72.4
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 2.1e-81 306.2 216 68.1
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 2.1e-81 306.2 210 73.3
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 2.7e-81 305.8 211 69.2
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 2.7e-81 305.8 225 69.3
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 3.5e-81 305.4 214 72.4
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 6.0e-81 304.7 213 71.4
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.3e-80 303.5 210 71.9
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.7e-80 303.1 207 73.9
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.3e-80 302.8 234 66.2
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 5.1e-80 301.6 228 65.4
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 6.6e-80 301.2 226 66.4
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 1.5e-79 300.1 231 67.1
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.3e-79 298.9 211 70.6
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.3e-79 298.5 222 66.2
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 4.3e-79 298.5 238 65.1
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 5.6e-79 298.1 234 64.1
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 1.2e-78 297.0 216 66.2
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 1.2e-78 297.0 215 67.4
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 2.1e-78 296.2 222 65.8
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 3.6e-78 295.4 213 69.0
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 3.6e-78 295.4 216 65.7
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 8.1e-78 294.3 231 64.9
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.8e-77 293.1 222 65.3
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 1.8e-77 293.1 215 65.1
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 4.0e-77 292.0 218 64.2
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 4.0e-77 292.0 220 63.6
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 5.2e-77 291.6 225 64.0
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 8.9e-77 290.8 216 63.4
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.2e-76 290.4 215 64.2
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 2.6e-76 289.3 212 68.4
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 9.9e-76 287.3 214 69.2
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 2.2e-75 286.2 215 63.3
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 6.4e-75 284.6 215 62.8
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 6.4e-75 284.6 215 64.2
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 5.4e-74 281.6 226 61.5
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 5.4e-74 281.6 215 61.9
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 6.0e-73 278.1 216 63.4
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 1.0e-72 277.3 216 63.4
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 1.7e-72 276.6 217 62.2
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 5.1e-72 275.0 214 65.4
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 6.6e-72 274.6 222 62.2
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 6.6e-72 274.6 222 62.2
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 6.6e-72 274.6 222 62.2
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 1.9e-71 273.1 220 61.8
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 2.5e-71 272.7 221 62.0
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 3.3e-71 272.3 229 60.3
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 3.3e-71 272.3 216 59.7
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 5.6e-71 271.6 216 61.6
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 5.6e-71 271.6 222 61.3
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 5.6e-71 271.6 216 59.7
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 7.3e-71 271.2 189 67.7
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 7.3e-71 271.2 279 53.8
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 1.2e-70 270.4 228 59.6
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 1.4e-69 266.9 221 60.6
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 4.9e-67 258.5 143 83.9
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 2.4e-66 256.1 215 59.1
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 1.2e-65 253.8 212 56.1
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 1.3e-64 250.4 218 57.3
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 1.7e-64 250.0 143 85.3
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 5.6e-63 245.0 139 83.5
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 9.0e-61 237.7 156 73.7
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 1.9e-55 219.9 143 71.3
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 9.6e-55 217.6 214 51.4
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.4e-53 213.0 153 70.6
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.2e-52 210.7 211 55.0
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 1.3e-43 180.6 118 72.0
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 6.0e-41 171.8 115 72.2
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 1.5e-31 140.6 192 42.2
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 1.2e-17 94.4 180 32.2
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 1.2e-12 77.8 118 36.4
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.5e-10 70.1 64 60.9
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 4.7e-09 65.9 208 28.4


User provided reference genes

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