Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 7.9e-64 246.9 121 100.0
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 4.2e-49 198.0 116 81.9
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 9.4e-49 196.8 109 84.4
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.4e-47 193.0 112 81.2
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 3.0e-47 191.8 112 80.4
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 8.8e-47 190.3 112 79.5
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.2e-46 189.9 106 82.1
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 9.8e-46 186.8 109 82.6
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 1.4e-44 183.0 117 80.3
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.4e-44 183.0 112 75.9
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 4.1e-44 181.4 110 78.2
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 5.4e-44 181.0 112 77.7
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 7.0e-44 180.6 112 78.6
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 9.1e-44 180.3 109 80.7
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 9.1e-44 180.3 112 75.0
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 1.6e-43 179.5 112 76.8
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 5.9e-43 177.6 112 74.1
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 3.8e-42 174.9 112 73.2
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 5.0e-42 174.5 112 72.3
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 5.0e-42 174.5 106 74.5
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 6.5e-42 174.1 112 73.2
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 1.1e-41 173.3 109 75.2
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 9.5e-41 170.2 106 77.4
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.4e-39 166.4 100 74.0
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.4e-39 166.4 100 74.0
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 3.0e-39 165.2 106 69.8
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 8.8e-39 163.7 98 76.5
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 2.0e-38 162.5 119 70.6
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 3.4e-38 161.8 108 74.1
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 9.8e-38 160.2 107 63.6
DCAR_008327 Daucus carota HOM05D004409 ORTHO05D005292 9.8e-38 160.2 83 84.3
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 1.7e-37 159.5 106 68.9
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 1.1e-36 156.8 104 74.0
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 1.8e-36 156.0 108 71.3
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 3.1e-36 155.2 121 57.0
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 5.4e-36 154.5 86 76.7
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 5.9e-35 151.0 112 61.6
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.8e-35 150.6 88 76.1
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 1.0e-34 150.2 112 66.1
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 2.9e-34 148.7 100 68.0
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 3.8e-34 148.3 83 75.9
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 5.0e-34 147.9 108 67.6
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 6.6e-34 147.5 108 63.9
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 3.3e-33 145.2 103 66.0
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 3.3e-33 145.2 98 72.4
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 4.3e-33 144.8 110 60.0
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 4.3e-33 144.8 112 61.6
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 4.3e-33 144.8 107 60.7
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.8e-32 142.1 117 60.7
ATR1136G211 Amborella trichopoda HOM05D004409 ORTHO05D005292 1.8e-31 139.4 112 56.2
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.3e-31 139.0 123 54.5
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 2.3e-31 139.0 111 58.6
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 3.0e-31 138.7 103 60.2
Lsat_1_v5_gn_6_94501 Lactuca sativa HOM05D004409 ORTHO05D005292 4.0e-31 138.3 112 58.0
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 4.0e-31 138.3 114 59.6
COL.COLO4_21695 Corchorus olitorius HOM05D004409 ORTHO05D005292 8.9e-31 137.1 84 75.0
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 1.5e-30 136.3 111 55.9
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 1.5e-30 136.3 115 55.7
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 3.4e-30 135.2 114 57.9
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 3.4e-30 135.2 106 57.5
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 4.4e-30 134.8 115 55.7
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 9.8e-30 133.7 108 60.2
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 4.9e-29 131.3 88 63.6
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 4.9e-29 131.3 121 55.4
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 6.4e-29 131.0 113 51.3
Ciclev10033339m.g Citrus clementina HOM05D004409 ORTHO05D005292 8.3e-29 130.6 84 71.4
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.3e-29 130.6 108 53.7
Actinidia01026 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.1e-28 130.2 107 55.1
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.1e-28 130.2 111 57.7
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.1e-28 130.2 102 58.8
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 1.8e-28 129.4 101 57.4
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 2.4e-28 129.0 100 55.0
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 2.4e-28 129.0 110 53.6
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 2.4e-28 129.0 108 56.5
CsaV3_3G002240 Cucumis sativus L. HOM05D004409 ORTHO05D005292 3.2e-28 128.6 115 51.3
ECA240G0589 Erigeron canadensis HOM05D004409 ORTHO05D005292 3.2e-28 128.6 107 52.3
PGR142G3629 Punica granatum HOM05D004409 ORTHO05D005292 3.2e-28 128.6 105 56.2
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 5.4e-28 127.9 115 51.3
Gohir.D13G124300 Gossypium hirsutum HOM05D004409 ORTHO05D005292 5.4e-28 127.9 108 53.7
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 5.4e-28 127.9 115 53.9
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 7.0e-28 127.5 117 56.4
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.0e-28 127.5 91 61.5
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 9.2e-28 127.1 119 50.4
MELO3C013895.2 Cucumis melo HOM05D004409 ORTHO05D005292 9.2e-28 127.1 116 53.4
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 9.2e-28 127.1 115 53.0
Eucgr.K00114 Eucalyptus grandis HOM05D004409 ORTHO05D005292 1.2e-27 126.7 81 64.2
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.2e-27 126.7 115 53.0
ClCG10G002150 Citrullus lanatus HOM05D004409 ORTHO05D005292 2.0e-27 125.9 102 55.9
DCAR_003519 Daucus carota HOM05D004409 ORTHO05D005292 2.0e-27 125.9 83 62.7
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.7e-27 125.6 104 52.9
FvH4_7g26400 Fragaria vesca HOM05D004409 ORTHO05D005292 3.5e-27 125.2 104 53.8
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 3.5e-27 125.2 105 53.3
Thecc.08G189000 Theobroma cacao HOM05D004409 ORTHO05D005292 5.9e-27 124.4 109 55.0
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 5.9e-27 124.4 113 52.2
HanXRQChr13g0419051 Helianthus annuus HOM05D004409 ORTHO05D005292 7.8e-27 124.0 107 50.5
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.8e-27 124.0 118 51.7
EL10Ac1g00121 Beta vulgaris HOM05D004409 ORTHO05D005292 1.0e-26 123.6 104 56.7
GSVIVG01013816001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.0e-26 123.6 91 60.4
ECA240G4009 Erigeron canadensis HOM05D004409 ORTHO05D005292 1.7e-26 122.9 80 63.8
CANSAT56G2887 Cannabis sativa HOM05D004409 ORTHO05D005292 2.3e-26 122.5 107 52.3
COL.COLO4_32251 Corchorus olitorius HOM05D004409 ORTHO05D005292 2.3e-26 122.5 113 50.4
RcHm_v2.0_Chr1g0328171 Rosa chinensis HOM05D004409 ORTHO05D005292 2.3e-26 122.5 113 52.2
GSVIVG01004838001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.3e-26 122.5 83 60.2
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 3.0e-26 122.1 118 48.3
Peaxi162Scf00391g00715 Petunia axillaris HOM05D004409 ORTHO05D005292 3.0e-26 122.1 107 53.3
PGR042G3450 Punica granatum HOM05D004409 ORTHO05D005292 3.0e-26 122.1 118 51.7
RcHm_v2.0_Chr1g0372951 Rosa chinensis HOM05D004409 ORTHO05D005292 6.6e-26 120.9 97 56.7
RcHm_v2.0_Chr1g0372991 Rosa chinensis HOM05D004409 ORTHO05D005292 6.6e-26 120.9 109 49.5
ATR1136G026 Amborella trichopoda HOM05D004409 ORTHO05D005292 1.1e-25 120.2 110 50.9
Cpa.g.sc13.213 Carica papaya HOM05D004409 ORTHO05D005292 1.1e-25 120.2 109 48.6
RcHm_v2.0_Chr1g0328141 Rosa chinensis HOM05D004409 ORTHO05D005292 1.5e-25 119.8 109 48.6
COL.COLO4_37302 Corchorus olitorius HOM05D004409 ORTHO05D005292 2.5e-25 119.0 103 49.5
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 4.3e-25 118.2 98 52.0
Thecc.07G180600 Theobroma cacao HOM05D004409 ORTHO05D005292 4.3e-25 118.2 108 50.9
FAN03G2468 Fragaria x ananassa HOM05D004409 ORTHO05D005292 7.3e-25 117.5 105 54.3
FAN10G4140 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.2e-24 116.7 105 54.3
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.6e-24 116.3 102 53.9
ATR1136G215 Amborella trichopoda HOM05D004409 ORTHO05D005292 3.6e-24 115.2 110 47.3
FvH4_7g26430 Fragaria vesca HOM05D004409 ORTHO05D005292 3.6e-24 115.2 106 53.8
HanXRQChr13g0418291 Helianthus annuus HOM05D004409 ORTHO05D005292 1.0e-23 113.6 113 46.9
CANSAT56G2756 Cannabis sativa HOM05D004409 ORTHO05D005292 1.8e-23 112.8 112 49.1
Prupe.7G057100 Prunus persica HOM05D004409 ORTHO05D005292 1.8e-23 112.8 107 54.2
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 3.1e-23 112.1 113 48.7
FAN17G1151 Fragaria x ananassa HOM05D004409 ORTHO05D005292 6.8e-23 110.9 106 52.8
SGA_v2.0_scaffold91G28102 Striga asiatica HOM05D004409 ORTHO05D005292 1.5e-22 109.8 110 50.9
FAN01G0604 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.0e-22 109.4 105 51.4
Migut.H01906 Erythranthe guttata HOM05D004409 ORTHO05D005292 3.4e-22 108.6 112 43.8
CANSAT56G0658 Cannabis sativa HOM05D004409 ORTHO05D005292 5.8e-22 107.8 108 47.2
CANSAT56G4079 Cannabis sativa HOM05D004409 ORTHO05D005292 5.8e-22 107.8 108 47.2
FAN06G5092 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.7e-21 106.3 101 52.5
Oeu006074.1 Olea europaea HOM05D004409 ORTHO05D005292 3.7e-21 105.1 101 47.5
MD07G1239500 Malus domestica HOM05D004409 ORTHO05D005292 4.9e-21 104.8 88 51.1
MSTRG.27238 Avicennia marina HOM05D004409 ORTHO05D005292 8.3e-21 104.0 114 47.4
MD07G1239700 Malus domestica HOM05D004409 ORTHO05D005292 8.3e-21 104.0 110 47.3
Ciclev10033338m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.4e-20 103.2 106 47.2
MD07G1239800 Malus domestica HOM05D004409 ORTHO05D005292 1.4e-20 103.2 105 48.6
Migut.H01907 Erythranthe guttata HOM05D004409 ORTHO05D005292 1.9e-20 102.8 113 44.2
Aa31LG9G14800 Aethionema arabicum HOM05D004409 ORTHO05D005292 3.2e-20 102.1 105 44.8
THA.LOC104816486 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 9.2e-20 100.5 101 43.6
Oeu056339.1 Olea europaea HOM05D004409 ORTHO05D005292 2.0e-19 99.4 109 41.3
Migut.J00932 Erythranthe guttata HOM05D004409 ORTHO05D005292 6.0e-19 97.8 100 47.0
TAR636G0767 Trochodendron aralioides HOM05D004409 ORTHO05D005292 8.6e-18 94.0 66 66.7
BcaC01g03728 Brassica carinata HOM05D004409 ORTHO05D005292 5.6e-17 91.3 108 41.7
BcaB04g18966 Brassica carinata HOM05D004409 ORTHO05D005292 1.6e-16 89.7 108 40.7
Eucgr.K00115 Eucalyptus grandis HOM05D004409 ORTHO05D005292 1.6e-16 89.7 109 47.7
Gorai.013G138900 Gossypium raimondii HOM05D004409 ORTHO05D005292 2.1e-16 89.4 63 63.5
Sp6g08250 Schrenkiella parvula HOM05D004409 ORTHO05D005292 2.1e-16 89.4 101 41.6
C03p49230 Brassica napus HOM05D004409 ORTHO05D005292 2.3e-15 85.9 116 35.3
A03p40420 Brassica napus HOM05D004409 ORTHO05D005292 3.1e-15 85.5 103 40.8
BraA03t13197Z Brassica rapa HOM05D004409 ORTHO05D005292 3.1e-15 85.5 103 40.8
Carub.0006s2782 Capsella rubella HOM05D004409 ORTHO05D005292 5.2e-15 84.7 109 37.6
BolC3t17205H Brassica oleracea HOM05D004409 ORTHO05D005292 8.9e-15 84.0 103 39.8
CARHR260260 Cardamine hirsuta HOM05D004409 ORTHO05D005292 1.5e-14 83.2 109 37.6
ATR0745G048 Amborella trichopoda HOM05D004409 ORTHO05D005292 2.0e-14 82.8 117 32.5
Cfa012335 Carpinus fangiana HOM05D004409 ORTHO05D005292 3.4e-14 82.0 103 43.7
BcaB01g02799 Brassica carinata HOM05D004409 ORTHO05D005292 2.2e-13 79.3 109 38.5
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.1e-12 77.0 104 38.5
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.1e-12 77.0 104 38.5
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 4.1e-12 75.1 103 37.9
CAN.G572.18 Capsicum annuum HOM05D004409 ORTHO05D005292 4.1e-12 75.1 99 32.3
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 2.1e-08 62.8 86 34.9
MD02G1296300 Malus domestica HOM05D002739 ORTHO05D002877 1.1e-07 60.5 57 36.8
Nn7g36459 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.8e-07 59.7 85 36.5
THA.LOC104800444 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 1.8e-07 59.7 89 32.6
Dinv36202 Davidia involucrata HOM05D002739 ORTHO05D002877 2.3e-07 59.3 57 38.6
Manes.14G006000 Manihot esculenta HOM05D002739 ORTHO05D002877 2.3e-07 59.3 111 29.7
Actinidia16366 Actinidia chinensis HOM05D002739 ORTHO05D002877 6.8e-07 57.8 58 39.7
AT5G56480 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 6.8e-07 57.8 92 29.3
SMO134G0054 Selaginella moellendorffii HOM05D004409 ORTHO05D005292 8.9e-07 57.4 64 34.4
Prupe.2G028300 Prunus persica HOM05D002739 ORTHO05D002877 1.2e-06 57.0 57 36.8
Nn2g15045 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.5e-06 56.6 118 29.7
PSO339G0568 Papaver somniferum HOM05D002739 ORTHO05D002877 1.5e-06 56.6 73 31.5
Potri.001G023200 Populus trichocarpa HOM05D002739 ORTHO05D002877 1.5e-06 56.6 60 36.7
TAR623G0756 Trochodendron aralioides HOM05D002739 ORTHO05D002877 1.5e-06 56.6 107 29.0
PSO384G1869 Papaver somniferum HOM05D002739 ORTHO05D002877 2.6e-06 55.8 57 38.6
QL01p017875 Quercus lobata HOM05D002739 ORTHO05D002877 2.6e-06 55.8 105 30.5
PSO384G1879 Papaver somniferum HOM05D002739 ORTHO05D002877 3.4e-06 55.5 91 29.7
BcaB03g12794 Brassica carinata HOM05D002739 ORTHO05D002877 4.4e-06 55.1 109 28.4
Dinv34529 Davidia involucrata HOM05D004409 ORTHO05D005292 4.4e-06 55.1 39 59.0
FAN10G1712 Fragaria x ananassa HOM05D002739 ORTHO05D002877 4.4e-06 55.1 105 28.6
AL8G32240 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 5.8e-06 54.7 92 26.1
CARHR241650 Cardamine hirsuta HOM05D002739 ORTHO05D002877 5.8e-06 54.7 110 26.4
Lj3g0006865 Lotus japonicus HOM05D002739 ORTHO05D002877 5.8e-06 54.7 111 31.5
Sp7g31290 Schrenkiella parvula HOM05D002739 ORTHO05D002877 5.8e-06 54.7 108 25.9
Aa31sc407G10 Aethionema arabicum HOM05D002739 ORTHO05D002877 7.6e-06 54.3 112 26.8
Ciclev10017226m.g Citrus clementina HOM05D002739 ORTHO05D002877 9.9e-06 53.9 109 29.4
Nn7g36457 Nelumbo nucifera HOM05D002739 ORTHO05D002877 9.9e-06 53.9 121 28.1
PSO339G6632 Papaver somniferum HOM05D002739 ORTHO05D002877 9.9e-06 53.9 57 35.1


User provided reference genes

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