Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28869 Davidia involucrata HOM05D012601 ORTHO05D011059 6.8e-205 717.2 399 100.0
Dinv15587 Davidia involucrata HOM05D012601 ORTHO05D011059 2.8e-142 509.2 335 81.2
Dinv38182 Davidia involucrata HOM05D000755 ORTHO05D011059 6.3e-142 508.1 317 94.0
Dinv07634 Davidia involucrata HOM05D012601 ORTHO05D011059 3.4e-135 485.7 305 93.4
Dinv27361 Davidia involucrata HOM05D012601 ORTHO05D011059 1.6e-132 476.9 305 87.9
Dinv00493 Davidia involucrata HOM05D012601 ORTHO05D001333 8.3e-118 427.9 280 81.8
Dinv21695 Davidia involucrata HOM05D012601 ORTHO05D011059 1.6e-116 423.7 386 63.2
Actinidia31496 Actinidia chinensis HOM05D012601 ORTHO05D011059 6.3e-57 225.7 397 41.8
Rhsim07G0119100 Rhododendron simsii HOM05D012601 ORTHO05D011059 6.1e-44 182.6 401 37.4
CSS0003836 Camellia sinensis var. sinensis HOM05D009881 ORTHO05D011059 1.8e-40 171.0 417 36.7
Oeu007318.1 Olea europaea HOM05D009881 ORTHO05D011059 1.7e-22 111.3 445 29.0
SGA_v2.0_scaffold69G23156 Striga asiatica HOM05D001352 ORTHO05D011059 1.6e-20 104.8 392 29.6
Atru.chr9.1223 Acer truncatum HOM05D017588 ORTHO05D019396 6.8e-19 99.4 400 30.8
Actinidia10863 Actinidia chinensis HOM05D012601 ORTHO05D011059 1.2e-18 98.6 302 32.8
Solyc08g077950.1 Solanum lycopersicum HOM05D009881 ORTHO05D011059 4.4e-18 96.7 400 26.5
CANSAT21G0374 Cannabis sativa HOM05D018673 ORTHO05D020268 2.8e-17 94.0 396 28.5
Sopen08g026460 Solanum pennellii HOM05D009881 ORTHO05D011059 8.3e-17 92.4 399 26.3
Cc08_g11440 Coffea canephora HOM05D009881 ORTHO05D011059 7.0e-16 89.4 513 22.8
SGA_v2.0_scaffold104G30220 Striga asiatica HOM05D009881 ORTHO05D011059 4.5e-15 86.7 134 41.0
TAR375G0689 Trochodendron aralioides HOM05D012601 ORTHO05D011059 4.5e-15 86.7 156 37.8
Ciclev10020707m.g Citrus clementina HOM05D017588 ORTHO05D019396 2.2e-14 84.3 410 27.6
Solyc12g099350.1 Solanum lycopersicum HOM05D009881 ORTHO05D011059 1.6e-12 78.2 391 24.0
MSTRG.11388 Avicennia marina HOM05D009881 ORTHO05D011059 2.1e-12 77.8 416 26.7
Nitab4.5_0000500g0180 Nicotiana tabacum HOM05D009881 ORTHO05D011059 2.7e-12 77.4 430 24.4
Nitab4.5_0012140g0020 Nicotiana tabacum HOM05D009881 ORTHO05D011059 3.6e-12 77.0 386 25.9
PGSC0003DMG400026223 Solanum tuberosum HOM05D009881 ORTHO05D011059 3.6e-12 77.0 415 24.3
Sopen12g034020 Solanum pennellii HOM05D009881 ORTHO05D011059 4.7e-12 76.6 396 23.7
SGA_v2.0_scaffold69G23154 Striga asiatica HOM05D001103 ORTHO05D000954 1.2e-10 72.0 83 47.0
ClCG10G002290 Citrullus lanatus HOM05D029038 ORTHO05D013291 2.0e-10 71.2 385 27.3
Nitab4.5_0003456g0060 Nicotiana tabacum HOM05D009881 ORTHO05D011059 3.7e-09 67.0 386 25.9
Peaxi162Scf00544g00016 Petunia axillaris HOM05D009881 ORTHO05D011059 3.7e-09 67.0 244 29.1
Manes.01G087600 Manihot esculenta HOM05D017588 ORTHO05D019396 6.3e-09 66.2 296 31.8
Duzib068G0325 Durio zibethinus HOM05D024389 ORTHO05D017870 3.1e-08 63.9 365 26.6
PGSC0003DMG400026589 Solanum tuberosum HOM05D009881 ORTHO05D011059 9.2e-08 62.4 395 25.3
Sabra03G0053600 Salix brachista HOM05D017588 ORTHO05D019396 1.6e-07 61.6 501 24.8
Thecc.03G242200 Theobroma cacao HOM05D024389 ORTHO05D017870 1.6e-07 61.6 225 28.9
Lsat_1_v5_gn_4_15441 Lactuca sativa HOM05D009881 ORTHO05D011059 2.7e-07 60.8 378 25.9
ECA233G4060 Erigeron canadensis HOM05D009881 ORTHO05D011059 1.7e-06 58.2 100 40.0
SalBow6G1342 Salvia bowleyana HOM05D009881 ORTHO05D011059 6.6e-06 56.2 410 24.9


User provided reference genes

Program Settings