Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28865 Davidia involucrata HOM05D004595 ORTHO05D005800 3.5e-211 738.0 371 100.0
Lj2C227T10 Lonicera japonica HOM05D004595 ORTHO05D005800 4.3e-76 289.3 356 49.4
CSS0020169 Camellia sinensis var. sinensis HOM05D004595 ORTHO05D005800 1.3e-72 277.7 356 47.5
Actinidia31498 Actinidia chinensis HOM05D004595 ORTHO05D005800 1.4e-66 257.7 344 43.9
TAR375G0350 Trochodendron aralioides HOM05D004595 ORTHO05D005800 4.3e-60 236.1 341 41.6
Nn1g08279 Nelumbo nucifera HOM05D004595 ORTHO05D005800 3.3e-52 209.9 351 37.9
Rhsim07G0118500 Rhododendron simsii HOM05D004595 ORTHO05D005800 2.0e-41 174.1 377 33.2
Rhsim07G0118300 Rhododendron simsii HOM05D004595 ORTHO05D005800 1.3e-40 171.4 377 32.6
CSS0009672 Camellia sinensis var. sinensis HOM05D004595 ORTHO05D005800 1.1e-36 158.3 202 43.6
Oeu037379.1 Olea europaea HOM05D004595 ORTHO05D005800 1.3e-35 154.8 375 32.8
Nitab4.5_0000500g0120 Nicotiana tabacum HOM05D004595 ORTHO05D005800 3.7e-35 153.3 357 30.8
Oeu054277.1 Olea europaea HOM05D004595 ORTHO05D005800 8.2e-35 152.1 396 31.1
MBI04_g28359_MAGBIO Magnolia biondii HOM05D004595 ORTHO05D005800 1.8e-34 151.0 234 38.9
Nitab4.5_0007628g0030 Nicotiana tabacum HOM05D004595 ORTHO05D005800 4.1e-34 149.8 346 30.6
Dinv44053 Davidia involucrata HOM05D004595 ORTHO05D005800 7.6e-33 145.6 379 30.9
Sopen08g026500 Solanum pennellii HOM05D004595 ORTHO05D005800 2.9e-32 143.7 380 30.0
MSTRG.1950 Avicennia marina HOM05D004595 ORTHO05D005800 1.4e-31 141.4 348 31.3
PGSC0003DMG400026251 Solanum tuberosum HOM05D004595 ORTHO05D005800 2.5e-31 140.6 380 29.5
Hund14485 Selenicereus undatus HOM05D004595 ORTHO05D005800 9.3e-31 138.7 386 30.1
Solyc08g077990.3 Solanum lycopersicum HOM05D004595 ORTHO05D005800 2.7e-30 137.1 380 29.5
Sc01g0008080 Simmondsia chinensis HOM05D004595 ORTHO05D005800 2.5e-28 130.6 368 31.5
CAN.G761.19 Capsicum annuum HOM05D004595 ORTHO05D005800 4.3e-28 129.8 380 29.7
QL12p009065 Quercus lobata HOM05D004595 ORTHO05D005800 7.4e-28 129.0 365 32.9
Aqoxy3G02685 Aquilegia oxysepala HOM05D004595 ORTHO05D005800 1.3e-27 128.3 178 44.9
DCAR_004592 Daucus carota HOM05D004595 ORTHO05D005800 4.8e-27 126.3 360 30.0
TAR374G0761 Trochodendron aralioides HOM05D004595 ORTHO05D005800 4.1e-26 123.2 143 49.7
Actinidia10859 Actinidia chinensis HOM05D004595 ORTHO05D005800 9.1e-26 122.1 105 57.1
Haze_07975 Corylus avellana HOM05D004595 ORTHO05D005800 9.1e-26 122.1 199 41.2
EL10Ac5g12285 Beta vulgaris HOM05D004595 ORTHO05D005800 5.9e-25 119.4 366 29.5
MD06G1048400 Malus domestica HOM05D004595 ORTHO05D005800 8.5e-24 115.5 355 30.7
Sabra01G0121600 Salix brachista HOM05D004595 ORTHO05D005800 3.6e-22 110.2 363 28.1
Manes.01G087300 Manihot esculenta HOM05D004595 ORTHO05D005800 6.1e-22 109.4 344 28.8
Potri.003G082600 Populus trichocarpa HOM05D004595 ORTHO05D005800 1.0e-21 108.6 359 27.9
Hma1.2p1_0227F.1_g096410 Hydrangea macrophylla HOM05D004595 ORTHO05D005800 1.8e-21 107.8 78 64.1
Migut.E00822 Erythranthe guttata HOM05D004595 ORTHO05D005800 2.3e-21 107.5 375 27.7
CDE04G3600 Ceratophyllum demersum HOM05D004595 ORTHO05D005800 5.1e-21 106.3 138 39.9
Eucgr.D02127 Eucalyptus grandis HOM05D004595 ORTHO05D005800 5.7e-20 102.8 360 26.9
Peaxi162Scf00446g00213 Petunia axillaris HOM05D004595 ORTHO05D005800 5.7e-20 102.8 156 36.5
AUR62018854 Chenopodium quinoa HOM05D004595 ORTHO05D005800 9.7e-20 102.1 245 31.8
RcHm_v2.0_Chr7g0205281 Rosa chinensis HOM05D004595 ORTHO05D005800 9.7e-20 102.1 348 29.6
MD04G1051700 Malus domestica HOM05D004595 ORTHO05D005800 6.3e-19 99.4 350 28.0
CANSAT21G1292 Cannabis sativa HOM05D004595 ORTHO05D005800 1.4e-18 98.2 166 41.0
Lsat_1_v5_gn_6_93760 Lactuca sativa HOM05D004595 ORTHO05D005800 2.4e-18 97.4 257 31.5
Ah.12g054050 Amaranthus hybridus HOM05D004595 ORTHO05D005800 4.1e-18 96.7 385 26.2
Prupe.5G058600 Prunus persica HOM05D004595 ORTHO05D005800 4.1e-18 96.7 180 34.4
Atru.chr9.1225 Acer truncatum HOM05D004595 ORTHO05D005800 9.1e-18 95.5 210 33.8
ClCG06G002450 Citrullus lanatus HOM05D004595 ORTHO05D005800 1.3e-16 91.7 122 41.8
HanXRQChr13g0418201 Helianthus annuus HOM05D004595 ORTHO05D005800 1.1e-15 88.6 349 28.4
CsaV3_6G008680 Cucumis sativus L. HOM05D004595 ORTHO05D005800 1.4e-15 88.2 127 41.7
Sabra03G0053300 Salix brachista HOM05D004595 ORTHO05D005800 7.2e-15 85.9 130 40.0
Sed0025323 Sechium edule HOM05D004595 ORTHO05D005800 7.2e-15 85.9 125 38.4
MELO3C022287.2 Cucumis melo HOM05D004595 ORTHO05D005800 1.6e-14 84.7 125 40.8
TWI60G0774 Tripterygium wilfordii HOM05D004595 ORTHO05D005800 1.0e-13 82.0 117 40.2
PGR031G0135 Punica granatum HOM05D004595 ORTHO05D005800 5.2e-13 79.7 295 27.8
QL04p029927 Quercus lobata HOM05D004595 ORTHO05D005800 2.6e-12 77.4 329 26.7
Ciclev10018937m.g Citrus clementina HOM05D004595 ORTHO05D005800 5.7e-12 76.3 116 39.7
FAN08G0032 Fragaria x ananassa HOM05D004595 ORTHO05D005800 5.7e-12 76.3 168 32.1
CANSAT25G1576 Cannabis sativa HOM05D004595 ORTHO05D005800 9.7e-12 75.5 166 33.7
FAN18G0798 Fragaria x ananassa HOM05D004595 ORTHO05D005800 9.7e-12 75.5 248 31.0
FvH4_5g20210 Fragaria vesca HOM05D004595 ORTHO05D005800 1.3e-11 75.1 248 30.6
FAN06G0382 Fragaria x ananassa HOM05D004595 ORTHO05D005800 2.2e-11 74.3 141 34.8
FAN06G4364 Fragaria x ananassa HOM05D004595 ORTHO05D005800 2.2e-11 74.3 141 34.8
FAN13G1547 Fragaria x ananassa HOM05D004595 ORTHO05D005800 2.8e-11 73.9 110 43.6
SalBow1G1528 Salvia bowleyana HOM05D004595 ORTHO05D005800 2.8e-11 73.9 147 33.3
SHI20405 Sapria himalayana HOM05D004595 ORTHO05D005800 2.8e-11 73.9 138 36.2
Phvul.010G046800 Phaseolus vulgaris HOM05D004595 ORTHO05D005800 4.8e-11 73.2 68 55.9
Gohir.D08G184200 Gossypium hirsutum HOM05D004595 ORTHO05D005800 8.2e-11 72.4 128 34.4
FAN10G2341 Fragaria x ananassa HOM05D004595 ORTHO05D005800 1.1e-10 72.0 141 34.0
Gorai.004G193500 Gossypium raimondii HOM05D004595 ORTHO05D005800 1.1e-10 72.0 128 34.4
SalBow1G8649 Salvia bowleyana HOM05D004595 ORTHO05D005800 1.1e-10 72.0 147 32.7
Duzib205G1146 Durio zibethinus HOM05D004595 ORTHO05D005800 1.4e-10 71.6 173 31.2
Gohir.A11G028800 Gossypium hirsutum HOM05D004595 ORTHO05D005800 1.8e-10 71.2 172 30.8
DCAR_005580 Daucus carota HOM05D004595 ORTHO05D005800 2.4e-10 70.9 151 35.1
Gohir.A08G165500 Gossypium hirsutum HOM05D004595 ORTHO05D005800 2.4e-10 70.9 128 33.6
Glyma.03G109300 Glycine max HOM05D004595 ORTHO05D005800 3.1e-10 70.5 102 42.2
Medtr8g007150 Medicago truncatula HOM05D004595 ORTHO05D005800 7.0e-10 69.3 68 48.5
FAN01G2950 Fragaria x ananassa HOM05D004595 ORTHO05D005800 9.1e-10 68.9 128 35.9
FAN03G1267 Fragaria x ananassa HOM05D004595 ORTHO05D005800 1.2e-09 68.6 142 34.5
FAN10G2859 Fragaria x ananassa HOM05D004595 ORTHO05D005800 1.2e-09 68.6 141 32.6
HPP92_025687 Vanilla planifolia HOM05D004595 ORTHO05D005800 1.2e-09 68.6 165 32.7
Gohir.D11G027300 Gossypium hirsutum HOM05D004595 ORTHO05D005800 2.0e-09 67.8 189 29.6
Gorai.007G029800 Gossypium raimondii HOM05D004595 ORTHO05D005800 2.6e-09 67.4 189 29.6
VMungo0331G1450 Vigna mungo HOM05D004595 ORTHO05D005800 3.5e-09 67.0 68 50.0
Ca_14806_v3 Cicer arietinum L. HOM05D004595 ORTHO05D005800 4.5e-09 66.6 68 50.0
Thecc.03G242900 Theobroma cacao HOM05D004595 ORTHO05D005800 4.5e-09 66.6 217 28.6
TPR.G32138 Trifolium pratense HOM05D004595 ORTHO05D005800 5.9e-09 66.2 68 48.5
Psat4g223720 Pisum sativum HOM05D004595 ORTHO05D005800 7.7e-09 65.9 68 48.5
COL.COLO4_07512 Corchorus olitorius HOM05D004595 ORTHO05D005800 1.0e-08 65.5 175 33.1
Glyma.07G115800 Glycine max HOM05D004595 ORTHO05D005800 1.0e-08 65.5 84 41.7
SGA_v2.0_scaffold20G09239 Striga asiatica HOM05D004595 ORTHO05D005800 1.3e-08 65.1 147 34.7
RcHm_v2.0_Chr1g0348071 Rosa chinensis HOM05D004595 ORTHO05D005800 1.7e-08 64.7 127 36.2
Lalb_Chr12g0210541 Lupinus albus HOM05D004595 ORTHO05D005800 2.2e-08 64.3 74 41.9
AT4G16970 Arabidopsis thaliana HOM05D004595 ORTHO05D005800 7.2e-07 59.3 69 43.5
PSO782G5445 Papaver somniferum HOM05D004595 ORTHO05D005800 7.2e-07 59.3 99 36.4
Lj3g0024575 Lotus japonicus HOM05D004595 ORTHO05D005800 2.1e-06 57.8 68 45.6


User provided reference genes

Program Settings