Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 1.6e-131 472.6 222 100.0
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 5.9e-89 331.3 223 70.9
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 6.5e-88 327.8 235 66.4
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 1.2e-81 307.0 227 63.4
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 7.2e-79 297.7 224 62.5
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.2e-78 297.0 222 64.9
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.2e-78 297.0 226 61.5
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 4.0e-77 292.0 231 58.9
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 5.7e-76 288.1 222 66.2
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 7.5e-76 287.7 239 59.0
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 6.3e-75 284.6 218 61.9
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 1.1e-74 283.9 237 57.4
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.1e-74 283.9 218 61.9
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 1.1e-74 283.9 226 62.4
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 7.0e-74 281.2 234 62.4
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 3.5e-73 278.9 205 65.4
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 4.5e-73 278.5 224 59.8
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 2.9e-72 275.8 218 60.1
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 2.9e-72 275.8 225 59.6
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 1.9e-71 273.1 239 54.0
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 4.0e-69 265.4 225 55.6
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 5.2e-69 265.0 228 56.6
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 8.8e-69 264.2 236 52.5
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 1.5e-68 263.5 221 57.5
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 2.0e-68 263.1 226 57.1
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 2.6e-68 262.7 236 52.1
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 5.7e-68 261.5 226 56.6
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 1.3e-67 260.4 229 55.5
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 2.8e-67 259.2 225 54.7
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 2.8e-67 259.2 225 56.0
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 2.4e-66 256.1 228 56.6
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 2.4e-66 256.1 226 55.3
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 5.4e-66 255.0 226 55.8
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 7.0e-66 254.6 229 55.0
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 1.2e-65 253.8 223 56.1
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 3.5e-65 252.3 226 53.5
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 3.5e-65 252.3 224 53.1
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.5e-65 251.9 224 56.7
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 5.9e-65 251.5 227 55.1
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 7.7e-65 251.1 223 56.1
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 2.2e-64 249.6 225 53.8
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 2.2e-64 249.6 226 54.9
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 2.9e-64 249.2 217 54.8
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.9e-63 246.5 226 52.2
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 3.2e-63 245.7 229 55.9
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 3.2e-63 245.7 217 53.5
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 5.5e-63 245.0 221 55.7
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.6e-62 243.4 217 53.0
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 2.1e-62 243.0 227 55.1
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 2.7e-62 242.7 253 49.8
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 6.1e-62 241.5 220 55.9
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.0e-61 240.7 141 78.0
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 1.4e-61 240.4 222 50.9
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.4e-61 240.4 236 52.1
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 2.3e-61 239.6 242 50.4
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 4.0e-61 238.8 226 50.9
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 4.4e-60 235.3 251 48.6
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 4.4e-60 235.3 223 52.9
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 5.7e-60 235.0 221 54.3
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 7.5e-60 234.6 228 50.4
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 9.8e-60 234.2 220 55.5
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 9.8e-60 234.2 209 55.0
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 1.7e-59 233.4 217 55.3
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 2.8e-59 232.6 226 52.2
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 2.8e-59 232.6 210 52.9
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 4.9e-59 231.9 222 50.5
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 8.3e-59 231.1 236 48.7
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 1.2e-57 227.3 235 51.1
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 3.5e-57 225.7 217 54.4
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 3.5e-57 225.7 217 53.5
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 1.0e-56 224.2 215 54.4
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.0e-56 224.2 224 50.4
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.0e-56 224.2 224 50.9
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.0e-56 224.2 158 67.1
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 1.3e-56 223.8 227 52.0
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 2.9e-56 222.6 217 53.0
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 2.5e-55 219.5 219 50.7
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 1.6e-54 216.9 189 56.1
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 1.6e-54 216.9 232 48.7
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 6.1e-54 214.9 229 48.9
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 1.0e-53 214.2 215 54.4
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 8.9e-53 211.1 156 66.0
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 2.9e-51 206.1 221 49.8
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 5.4e-50 201.8 215 48.4
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 5.9e-49 198.4 212 47.6
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 3.3e-47 192.6 144 60.4
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 3.6e-46 189.1 211 43.6
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 3.7e-43 179.1 256 39.8
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 1.6e-41 173.7 224 42.4
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 2.0e-41 173.3 213 44.6
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 6.6e-40 168.3 210 44.3
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 8.6e-40 167.9 139 55.4
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 1.5e-39 167.2 112 66.1
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 2.1e-38 163.3 171 49.7
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 6.2e-38 161.8 111 70.3
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 7.3e-31 138.3 136 52.9
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 2.3e-29 133.3 184 38.0
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 8.9e-29 131.3 151 44.4
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 1.3e-27 127.5 259 28.6
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 3.2e-26 122.9 182 36.8
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 2.5e-23 113.2 97 55.7
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 7.3e-23 111.7 125 46.4
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 1.5e-20 104.0 149 39.6
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 2.3e-16 90.1 98 50.0
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 3.9e-16 89.4 66 59.1
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 1.9e-15 87.0 111 36.9
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 2.5e-15 86.7 188 33.0
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 3.3e-15 86.3 98 48.0
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 6.2e-14 82.0 94 43.6
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 9.3e-10 68.2 50 54.0
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 1.5e-07 60.8 94 40.4


User provided reference genes

Program Settings