Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 1.1e-127 460.3 287 100.0
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.8e-98 363.2 287 74.6
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 4.2e-95 352.1 288 76.0
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.6e-91 340.1 285 71.2
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 3.6e-91 339.0 276 72.5
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 1.6e-86 323.6 286 72.4
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 3.5e-86 322.4 286 70.3
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 3.5e-86 322.4 282 70.2
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 2.3e-85 319.7 276 68.1
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 2.3e-85 319.7 276 68.1
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 3.9e-85 318.9 281 65.8
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 1.6e-83 313.5 285 72.6
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 4.8e-83 312.0 286 75.2
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 1.4e-82 310.5 279 65.9
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 2.4e-82 309.7 286 69.6
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 4.0e-82 308.9 301 67.4
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 6.9e-82 308.1 278 68.3
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 1.2e-81 307.4 291 67.7
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 2.0e-81 306.6 276 69.6
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 7.6e-81 304.7 283 67.1
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 9.9e-81 304.3 299 67.9
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 1.7e-80 303.5 275 64.7
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 2.2e-80 303.1 277 66.1
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 3.8e-80 302.4 291 66.0
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 6.4e-80 301.6 294 70.4
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 6.4e-80 301.6 287 66.6
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 2.5e-79 299.7 294 63.6
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 4.2e-79 298.9 273 67.8
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 5.5e-79 298.5 284 68.3
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 7.1e-79 298.1 284 63.0
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 9.3e-79 297.7 291 68.7
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 9.3e-79 297.7 286 64.0
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 9.3e-79 297.7 286 64.0
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 2.1e-78 296.6 280 67.9
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 7.9e-78 294.7 284 65.1
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 7.9e-78 294.7 273 60.1
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 7.9e-78 294.7 279 64.9
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.0e-77 294.3 287 69.3
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 1.8e-77 293.5 301 59.8
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.8e-77 293.5 292 66.4
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 3.9e-77 292.4 279 63.1
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 5.1e-77 292.0 290 66.9
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 8.7e-77 291.2 298 64.1
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 1.5e-76 290.4 275 66.5
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 1.9e-76 290.0 281 72.6
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 1.9e-76 290.0 282 64.5
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 4.3e-76 288.9 295 67.8
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 7.4e-76 288.1 297 59.9
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 7.4e-76 288.1 291 60.5
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 9.6e-76 287.7 290 69.0
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 1.3e-75 287.3 287 66.6
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 1.6e-75 287.0 274 66.1
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 2.1e-75 286.6 294 62.6
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 8.2e-75 284.6 287 63.4
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.8e-74 283.5 286 70.6
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 3.1e-74 282.7 296 63.9
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 1.2e-73 280.8 291 64.6
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 1.3e-72 277.3 280 69.6
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 1.7e-72 276.9 274 68.6
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 2.2e-72 276.6 316 61.7
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 2.9e-72 276.2 291 62.9
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 3.2e-71 272.7 285 64.9
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 5.5e-71 271.9 288 64.2
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 9.3e-71 271.2 308 63.0
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 1.6e-70 270.4 289 68.9
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 1.6e-70 270.4 285 68.1
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 1.6e-70 270.4 285 68.1
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 2.1e-70 270.0 297 63.3
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.7e-70 269.6 302 60.9
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 3.5e-70 269.2 274 67.5
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 4.6e-70 268.9 276 65.2
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 4.6e-70 268.9 314 57.0
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 7.9e-70 268.1 304 59.2
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 1.3e-69 267.3 283 63.3
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 1.3e-69 267.3 306 60.5
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 8.7e-69 264.6 302 62.3
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 8.7e-69 264.6 285 72.3
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 8.7e-69 264.6 274 63.1
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 1.1e-68 264.2 301 58.5
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 1.1e-68 264.2 309 60.5
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 1.9e-68 263.5 279 61.6
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 3.3e-68 262.7 297 63.3
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 3.3e-68 262.7 291 59.1
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 3.3e-68 262.7 310 60.0
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 3.3e-68 262.7 293 61.4
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 3.3e-68 262.7 280 64.3
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 3.3e-68 262.7 280 64.3
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 9.7e-68 261.2 287 70.7
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 1.6e-67 260.4 297 63.0
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 4.8e-67 258.8 277 67.5
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 4.8e-67 258.8 301 59.5
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 6.3e-67 258.5 292 63.0
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 6.3e-67 258.5 293 60.1
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 8.2e-67 258.1 286 62.9
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 1.1e-66 257.7 287 62.4
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 1.4e-66 257.3 288 61.8
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 1.4e-66 257.3 288 61.8
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 1.4e-66 257.3 293 64.5
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 1.8e-66 256.9 291 57.0
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 2.4e-66 256.5 278 61.2
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 5.3e-66 255.4 293 63.8
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 6.9e-66 255.0 287 61.0
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 1.2e-65 254.2 285 61.8
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 1.2e-65 254.2 307 50.8
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 2.6e-65 253.1 280 64.6
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 3.4e-65 252.7 282 59.2
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 1.3e-64 250.8 291 57.0
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 1.7e-64 250.4 291 59.1
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 1.7e-64 250.4 292 61.6
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 2.2e-64 250.0 292 61.3
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 3.8e-64 249.2 288 60.8
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 5.0e-64 248.8 304 58.6
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 8.5e-64 248.1 278 60.1
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 1.9e-63 246.9 297 63.0
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 2.5e-63 246.5 284 68.3
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 4.2e-63 245.7 291 66.7
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 5.5e-63 245.4 293 61.1
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 1.6e-62 243.8 290 62.8
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 2.7e-62 243.0 286 64.3
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 3.6e-62 242.7 297 63.0
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 6.1e-62 241.9 246 63.4
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 3.0e-61 239.6 290 64.5
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 1.1e-60 237.7 282 61.0
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 2.8e-59 233.0 269 58.7
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 3.7e-59 232.6 385 46.0
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 8.2e-59 231.5 283 59.4
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 6.9e-58 228.4 282 58.2
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 2.9e-56 223.0 272 57.4
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 2.9e-56 223.0 330 53.9
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 6.5e-56 221.9 219 63.9
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 1.1e-55 221.1 281 54.8
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 3.2e-55 219.5 277 55.6
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 1.6e-54 217.2 289 53.3
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 6.7e-53 211.8 276 56.5
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 2.0e-52 210.3 284 55.6
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 3.3e-52 209.5 281 53.7
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 5.7e-52 208.8 291 54.3
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 9.7e-52 208.0 120 83.3
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.1e-50 204.5 120 80.0
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 3.1e-50 203.0 175 68.6
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 3.1e-50 203.0 286 54.5
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 5.3e-50 202.2 177 78.0
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 3.5e-49 199.5 309 44.7
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 5.9e-49 198.7 286 57.7
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 2.2e-48 196.8 274 50.7
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 1.8e-45 187.2 272 50.7
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 3.9e-45 186.0 117 74.4
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 8.8e-45 184.9 244 59.4
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 3.5e-41 172.9 126 67.5
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 5.0e-40 169.1 223 59.6
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 2.7e-38 163.3 191 61.8
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 1.1e-34 151.4 87 81.6
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 4.0e-29 132.9 77 83.1
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 8.8e-29 131.7 75 85.3
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 1.2e-28 131.3 292 52.1
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 1.2e-28 131.3 295 41.7
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 8.3e-27 125.2 88 67.0
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 1.4e-26 124.4 282 42.9
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 3.1e-26 123.2 301 51.2
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 3.1e-26 123.2 275 50.9
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 5.9e-25 119.0 129 55.0
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 1.7e-24 117.5 75 80.0
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 2.9e-24 116.7 197 56.3
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.6e-22 110.9 139 60.4
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 2.8e-22 110.2 186 49.5
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 6.1e-22 109.0 72 75.0
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 4.4e-20 102.8 67 74.6
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 9.8e-20 101.7 73 75.3
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 9.8e-20 101.7 305 33.4
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 1.7e-19 100.9 68 66.2
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.1e-18 98.2 63 76.2
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.6e-17 94.4 77 62.3
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 3.5e-17 93.2 96 50.0
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 5.0e-16 89.4 106 49.1
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 2.1e-14 84.0 64 59.4
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.2e-11 73.9 44 84.1
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 5.4e-10 69.3 108 44.4
FAN06G2565 Fragaria x ananassa HOM05D003822 ORTHO05D001690 9.2e-10 68.6 75 56.0
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 1.2e-09 68.2 259 47.5
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 3.0e-08 63.5 137 44.5
ATR0737G020 Amborella trichopoda HOM05D003822 ORTHO05D004484 1.6e-06 57.8 57 56.1
Zm00001eb392350 Zea mays HOM05D000367 ORTHO05D001438 8.0e-06 55.5 44 68.2


User provided reference genes

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