Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.5e-226 789.3 431 100.0
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 1.2e-98 364.4 437 52.9
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 2.8e-95 353.2 326 66.6
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.3e-87 327.8 440 47.7
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.4e-85 319.7 440 48.2
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.4e-85 319.7 438 47.7
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 5.7e-80 302.4 459 44.7
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 6.9e-78 295.4 426 46.9
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.5e-75 287.0 421 44.7
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.1e-72 278.1 448 41.3
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.3e-71 274.6 436 43.8
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 4.2e-67 259.6 432 40.5
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 6.1e-66 255.8 447 43.2
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.1e-64 251.5 442 42.8
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.2e-61 241.5 446 39.2
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 2.0e-61 240.7 432 41.7
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 3.8e-60 236.5 439 40.1
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 4.2e-59 233.0 468 39.3
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.6e-58 231.1 435 40.7
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.1e-58 230.7 425 38.1
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.0e-57 228.4 437 39.6
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 1.4e-57 228.0 443 42.9
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.4e-56 223.4 436 39.0
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 3.4e-56 223.4 441 37.4
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 1.1e-54 218.4 438 37.9
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 2.9e-52 210.3 442 36.2
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 3.8e-52 209.9 416 36.8
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 1.2e-50 204.9 446 37.9
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.7e-50 203.8 431 35.7
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 3.6e-50 203.4 369 42.8
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 8.0e-50 202.2 424 37.3
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 2.0e-48 197.6 321 43.3
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 2.0e-48 197.6 456 33.6
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 3.4e-48 196.8 427 37.7
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 3.1e-46 190.3 433 37.4
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 3.8e-44 183.3 430 35.1
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 6.6e-44 182.6 425 34.8
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 6.8e-41 172.6 473 31.7
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 6.8e-41 172.6 431 36.0
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 1.5e-40 171.4 432 35.2
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 3.4e-40 170.2 442 35.1
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 4.1e-38 163.3 393 34.4
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 5.4e-38 162.9 445 33.7
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 2.3e-36 157.5 438 33.1
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.5e-35 154.8 458 32.5
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.9e-35 154.5 444 34.0
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 3.3e-35 153.7 452 31.9
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 5.6e-35 152.9 416 31.7
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 7.3e-35 152.5 414 34.1
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 1.2e-34 151.8 435 33.6
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 4.7e-34 149.8 463 32.2
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 2.3e-33 147.5 439 32.6
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 4.0e-33 146.7 432 33.1
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 1.5e-32 144.8 413 33.4
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.5e-32 144.8 444 33.1
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 4.4e-32 143.3 460 33.0
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 7.5e-32 142.5 413 33.2
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 7.5e-32 142.5 440 31.4
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 9.8e-32 142.1 431 29.9
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 2.2e-31 141.0 453 32.5
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 2.2e-31 141.0 412 30.1
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 4.9e-31 139.8 450 33.3
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 1.9e-30 137.9 419 30.1
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 3.2e-30 137.1 430 32.8
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 7.0e-30 136.0 444 30.6
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 7.0e-30 136.0 441 32.9
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 2.0e-29 134.4 461 33.2
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 3.5e-29 133.7 423 29.6
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 4.6e-29 133.3 400 29.8
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 6.0e-29 132.9 442 31.4
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 6.0e-29 132.9 415 31.1
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.7e-28 131.3 419 27.7
Lsat_1_v5_gn_8_70880 Lactuca sativa HOM05D003726 ORTHO05D003520 2.3e-28 131.0 424 31.8
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 3.0e-28 130.6 404 29.7
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.1e-27 128.6 461 28.0
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 1.1e-27 128.6 424 30.4
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 1.5e-27 128.3 413 32.0
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 1.5e-27 128.3 431 28.5
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 1.9e-27 127.9 413 28.8
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 1.6e-26 124.8 421 29.5
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.1e-26 124.4 423 31.4
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 3.6e-26 123.6 460 29.6
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 3.6e-26 123.6 414 28.5
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 4.7e-26 123.2 425 28.9
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 4.7e-26 123.2 431 29.9
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 4.0e-25 120.2 427 27.6
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 5.2e-25 119.8 455 31.0
AL8G34900 Arabidopsis lyrata HOM05D011448 ORTHO05D003520 6.8e-25 119.4 432 31.2
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 6.8e-25 119.4 429 26.8
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 8.9e-25 119.0 424 30.0
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 1.5e-24 118.2 427 30.0
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 2.6e-24 117.5 449 31.0
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 9.8e-24 115.5 427 31.1
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 9.8e-24 115.5 461 28.4
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 2.2e-23 114.4 237 39.7
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 2.2e-23 114.4 430 28.6
Thhalv10015324m.g Eutrema salsugineum HOM05D011448 ORTHO05D003520 4.1e-22 110.2 446 30.9
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.2e-21 108.6 423 27.2
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 2.1e-21 107.8 468 27.6
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 4.6e-21 106.7 173 42.8
BcaC04g19824 Brassica carinata HOM05D011448 ORTHO05D003520 6.0e-21 106.3 434 27.6
BolC9t57921H Brassica oleracea HOM05D011448 ORTHO05D003520 6.0e-21 106.3 434 27.6
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 6.0e-21 106.3 447 26.4
CDE04G1884 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 1.3e-20 105.1 429 27.0
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 1.7e-20 104.8 427 28.3
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 5.1e-20 103.2 415 28.4
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 6.6e-20 102.8 400 30.5
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 1.9e-19 101.3 429 24.5
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 2.5e-19 100.9 364 29.9
CDE08G1412 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 9.5e-19 99.0 430 26.7
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 9.5e-19 99.0 436 26.8
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 2.1e-18 97.8 441 25.6
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 2.1e-18 97.8 416 25.7
A10p15630 Brassica napus HOM05D011448 ORTHO05D003520 2.8e-18 97.4 433 27.9
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.6e-18 97.1 409 27.1
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 4.7e-18 96.7 437 27.2
AT5G58630 Arabidopsis thaliana HOM05D011448 ORTHO05D003520 8.1e-18 95.9 430 29.5
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 8.1e-18 95.9 434 27.0
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 8.1e-18 95.9 419 27.9
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.8e-17 94.7 420 26.4
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.8e-17 94.7 308 32.5
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.8e-17 94.7 436 27.1
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 1.8e-17 94.7 419 26.0
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 3.1e-17 94.0 383 27.9
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 3.1e-17 94.0 414 26.6
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 8.9e-17 92.4 425 27.1
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 8.9e-17 92.4 413 27.8
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 8.9e-17 92.4 436 28.0
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.2e-16 92.0 432 25.9
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 1.5e-16 91.7 150 37.3
C09p50710 Brassica napus HOM05D011448 ORTHO05D003520 3.4e-16 90.5 429 25.9
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 5.8e-16 89.7 440 27.3
BraA10t43670Z Brassica rapa HOM05D011448 ORTHO05D003520 1.7e-15 88.2 433 27.0
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 2.2e-15 87.8 410 26.1
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 2.9e-15 87.4 394 28.2
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 2.9e-15 87.4 413 26.6
PSO384G5133 Papaver somniferum HOM05D003726 ORTHO05D003520 3.7e-15 87.0 351 27.6
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 4.9e-15 86.7 429 24.2
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 6.4e-15 86.3 203 31.5
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 1.1e-14 85.5 433 24.9
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 4.1e-14 83.6 203 35.0
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 5.4e-14 83.2 206 34.0
Sp6g20330 Schrenkiella parvula HOM05D011448 ORTHO05D003520 7.1e-14 82.8 428 28.5
Carub.0008s1925 Capsella rubella HOM05D011448 ORTHO05D003520 9.2e-14 82.4 352 29.0
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 1.6e-13 81.6 438 23.3
MSTRG.12680 Avicennia marina HOM05D003726 ORTHO05D003520 2.7e-13 80.9 438 26.9
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 3.5e-13 80.5 409 26.7
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 7.8e-13 79.3 186 30.1
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 7.8e-13 79.3 421 26.8
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.7e-12 78.2 366 27.6
ECA236G2409 Erigeron canadensis HOM05D000674 ORTHO05D001490 1.7e-12 78.2 379 26.6
SalBow2G1798 Salvia bowleyana HOM05D003726 ORTHO05D003520 1.7e-12 78.2 413 26.6
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 3.9e-12 77.0 180 33.9
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.1e-12 76.6 366 27.3
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 5.1e-12 76.6 404 23.5
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 1.1e-11 75.5 434 25.6
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 1.1e-11 75.5 200 32.5
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 1.1e-11 75.5 407 25.8
arahy.Tifrunner.gnm1.ann1.8UNH89 Arachis hypogaea HOM05D003726 ORTHO05D003520 1.5e-11 75.1 426 26.3
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 1.9e-11 74.7 127 37.0
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 1.9e-11 74.7 420 25.5
TPR.G34575 Trifolium pratense HOM05D003726 ORTHO05D003520 4.3e-11 73.6 418 26.8
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 7.3e-11 72.8 158 33.5
HanXRQChr05g0135801 Helianthus annuus HOM05D003726 ORTHO05D003520 7.3e-11 72.8 280 30.0
HPP92_013884 Vanilla planifolia HOM05D003726 ORTHO05D003520 7.3e-11 72.8 413 24.9
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.6e-10 71.6 339 26.8
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 2.8e-10 70.9 405 25.7
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 2.8e-10 70.9 405 25.7
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 3.1e-09 67.4 405 24.2
FAN21G2593 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.0e-09 67.0 107 46.7
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 5.2e-09 66.6 436 25.5
FAN21G2890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 5.2e-09 66.6 139 36.7
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 6.8e-09 66.2 436 25.5
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 6.8e-09 66.2 252 29.0
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.5e-08 65.1 218 30.3
Psat2g057960 Pisum sativum HOM05D003726 ORTHO05D003520 1.5e-08 65.1 410 23.9
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 2.0e-08 64.7 419 22.7
TAR636G2889 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.0e-08 64.7 189 34.9
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 3.4e-08 63.9 193 29.0
Ca_05609_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 2.9e-07 60.8 286 27.6
arahy.Tifrunner.gnm1.ann1.XHL4C7 Arachis hypogaea HOM05D003726 ORTHO05D003520 4.9e-07 60.1 143 37.1
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 6.4e-07 59.7 430 24.2
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 8.4e-07 59.3 414 25.4
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 1.1e-06 58.9 436 22.5
ECA246G5081 Erigeron canadensis HOM05D003726 ORTHO05D003520 3.2e-06 57.4 107 38.3


User provided reference genes

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