Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 9.3e-153 543.5 274 100.0
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 3.6e-112 408.7 279 76.7
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 5.7e-110 401.4 275 76.4
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 1.9e-105 386.3 274 75.9
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 3.2e-105 385.6 271 74.2
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.7e-101 372.1 237 79.7
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 5.4e-100 368.2 266 72.6
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 8.6e-98 360.9 265 69.4
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 3.1e-92 342.4 281 65.5
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.2e-91 340.5 268 67.5
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.7e-91 339.3 270 65.9
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 4.5e-91 338.6 265 66.4
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 1.3e-90 337.0 274 66.4
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 2.3e-90 336.3 276 67.0
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 1.9e-89 333.2 270 64.8
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 7.3e-89 331.3 270 64.1
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 1.2e-88 330.5 270 63.7
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 2.8e-88 329.3 267 64.4
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 6.1e-88 328.2 270 63.7
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 1.0e-87 327.4 274 63.1
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 6.8e-87 324.7 240 67.1
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 6.8e-87 324.7 269 62.8
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 2.6e-86 322.8 267 62.2
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 2.6e-86 322.8 269 64.7
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 9.8e-86 320.9 269 65.1
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.2e-83 313.9 243 67.9
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 4.6e-83 312.0 236 68.2
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 5.9e-83 311.6 265 60.8
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 1.6e-80 303.5 267 59.9
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 3.6e-80 302.4 275 62.2
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 8.0e-80 301.2 277 62.8
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 1.8e-79 300.1 265 60.0
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 2.3e-79 299.7 261 60.9
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 8.9e-79 297.7 211 73.0
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 1.2e-78 297.4 278 58.3
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 2.0e-78 296.6 273 61.5
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 3.7e-77 292.4 275 60.0
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 4.9e-77 292.0 278 58.3
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 1.4e-76 290.4 292 56.2
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 1.4e-76 290.4 270 59.3
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 3.2e-76 289.3 226 65.5
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 5.4e-76 288.5 266 59.8
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 5.4e-76 288.5 254 60.6
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 2.7e-75 286.2 260 59.6
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 2.7e-75 286.2 267 59.2
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 6.0e-75 285.0 263 58.6
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 1.0e-74 284.3 260 59.6
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 5.0e-74 282.0 259 60.2
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 6.6e-74 281.6 284 57.4
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 8.6e-74 281.2 242 62.8
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.9e-73 280.0 259 59.5
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 2.5e-73 279.6 283 56.9
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 7.3e-73 278.1 261 58.6
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 2.1e-72 276.6 261 58.2
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 6.2e-72 275.0 264 59.1
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.1e-71 274.2 261 57.9
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 2.3e-71 273.1 278 56.1
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 2.3e-71 273.1 268 58.6
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 5.2e-71 271.9 354 47.5
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.5e-70 270.4 261 57.5
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 4.4e-70 268.9 218 66.1
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 2.2e-69 266.5 261 58.6
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 6.4e-69 265.0 258 58.9
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 6.4e-69 265.0 258 58.9
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 3.2e-68 262.7 222 62.2
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 5.4e-68 261.9 259 55.6
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 5.4e-68 261.9 258 57.0
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 9.2e-68 261.2 257 56.4
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 2.7e-67 259.6 246 58.1
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 3.5e-67 259.2 225 58.7
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 1.3e-66 257.3 222 62.6
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 3.9e-66 255.8 262 56.5
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 4.3e-65 252.3 255 56.5
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 4.3e-65 252.3 255 56.5
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 2.8e-64 249.6 254 57.9
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 3.6e-64 249.2 268 53.7
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 6.2e-64 248.4 255 57.6
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 1.1e-63 247.7 270 51.9
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.4e-63 247.3 231 59.7
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 1.4e-63 247.3 243 57.2
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 3.1e-63 246.1 273 53.8
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 3.4e-62 242.7 247 55.9
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 4.4e-62 242.3 255 55.7
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 9.9e-62 241.1 250 57.2
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 7.8e-59 231.5 161 73.3
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 3.3e-57 226.1 256 52.3
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.4e-55 220.7 230 55.7
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 3.1e-55 219.5 224 57.6
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 4.9e-53 212.2 348 40.5
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 9.3e-52 208.0 257 49.0
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 5.1e-50 202.2 217 56.2
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 1.1e-47 194.5 259 46.7
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 6.9e-47 191.8 271 46.5
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 3.4e-46 189.5 260 44.2
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 8.4e-45 184.9 272 44.1
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 8.4e-45 184.9 272 44.1
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 8.4e-45 184.9 190 54.7
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 4.2e-44 182.6 278 44.2
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 4.2e-44 182.6 255 44.7
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.2e-43 181.0 255 44.7
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 4.6e-43 179.1 256 44.5
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 7.9e-43 178.3 278 43.2
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 1.0e-42 177.9 268 41.8
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 1.8e-42 177.2 257 45.5
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 1.8e-42 177.2 257 45.5
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 2.3e-42 176.8 275 42.2
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 1.1e-41 174.5 275 41.8
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 1.5e-41 174.1 264 43.6
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 4.3e-41 172.6 118 72.0
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 5.3e-39 165.6 163 57.1
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 1.2e-38 164.5 228 47.8
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 3.4e-38 162.9 184 50.5
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 3.2e-36 156.4 103 77.7
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 5.6e-33 145.6 177 48.6
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 3.7e-32 142.9 179 46.4
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 8.4e-29 131.7 94 67.0
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 1.2e-27 127.9 154 46.1
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 2.3e-26 123.6 186 42.5
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 8.7e-26 121.7 80 76.2
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 1.1e-25 121.3 182 46.2
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 4.3e-25 119.4 124 53.2
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 1.1e-23 114.8 70 80.0
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 2.2e-21 107.1 234 33.3
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 2.2e-21 107.1 214 36.4
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 5.0e-21 105.9 72 72.2
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 3.2e-20 103.2 256 32.4
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 1.5e-17 94.4 63 74.6
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 3.1e-15 86.7 63 65.1
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 7.7e-14 82.0 48 87.5
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-10 70.9 114 37.7
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 3.3e-09 66.6 148 35.8
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 5.7e-09 65.9 79 44.3


User provided reference genes

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