Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28492 Davidia involucrata HOM05D005596 ORTHO05D006994 8.3e-42 173.3 90 100.0
Actinidia32899 Actinidia chinensis HOM05D005596 ORTHO05D006994 3.3e-30 134.8 83 79.5
Hma1.2p1_0099F.1_g048580 Hydrangea macrophylla HOM05D005596 ORTHO05D006994 4.3e-30 134.4 82 82.9
FvH4_7g28970 Fragaria vesca HOM05D005596 ORTHO05D006994 2.2e-26 122.1 82 76.8
Cfa008276 Carpinus fangiana HOM05D005596 ORTHO05D006994 1.1e-25 119.8 75 80.0
FAN01G2242 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.6e-24 115.9 82 74.4
Gohir.A09G039400 Gossypium hirsutum HOM05D005596 ORTHO05D006994 1.6e-24 115.9 75 78.7
Actinidia34077 Actinidia chinensis HOM05D005596 ORTHO05D006994 2.7e-24 115.2 69 85.5
vmacro06733 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 3.0e-23 111.7 73 75.3
FAN03G2823 Fragaria x ananassa HOM05D005596 ORTHO05D006994 3.9e-23 111.3 74 78.4
Prupe.2G289700 Prunus persica HOM05D005596 ORTHO05D006994 1.1e-22 109.8 77 77.9
FAN03G1867 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.5e-22 109.4 71 78.9
FAN10G2089 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.5e-22 109.4 71 78.9
FAN10G3222 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.5e-22 109.4 71 78.9
Rhsim03G0176700 Rhododendron simsii HOM05D005596 ORTHO05D006994 1.5e-22 109.4 75 73.3
Potri.012G133900 Populus trichocarpa HOM05D005596 ORTHO05D006994 2.5e-22 108.6 69 79.7
GSVIVG01010628001 Vitis vinifera HOM05D005596 ORTHO05D006994 3.3e-22 108.2 68 83.8
LjContig00238g0007789 Lotus japonicus HOM05D005596 ORTHO05D006994 4.3e-22 107.8 69 79.7
Sabra12G0100700 Salix brachista HOM05D005596 ORTHO05D006994 4.3e-22 107.8 70 78.6
Sopen03g005130 Solanum pennellii HOM05D005596 ORTHO05D006994 4.3e-22 107.8 82 67.1
FAN06G1108 Fragaria x ananassa HOM05D005596 ORTHO05D006994 5.6e-22 107.5 71 77.5
FAN06G4254 Fragaria x ananassa HOM05D005596 ORTHO05D006994 5.6e-22 107.5 71 77.5
CiPaw.03G102200 Carya illinoinensis HOM05D005596 ORTHO05D006994 7.3e-22 107.1 69 81.2
Haze_13762 Corylus avellana HOM05D005596 ORTHO05D006994 7.3e-22 107.1 75 76.0
Eucgr.K00221 Eucalyptus grandis HOM05D005596 ORTHO05D006994 9.5e-22 106.7 71 74.6
QL09p015812 Quercus lobata HOM05D005596 ORTHO05D006994 9.5e-22 106.7 65 80.0
Manes.06G143300 Manihot esculenta HOM05D005596 ORTHO05D006994 1.2e-21 106.3 69 75.4
Glyma.10G239200 Glycine max HOM05D005596 ORTHO05D006994 1.6e-21 105.9 69 78.3
Ciclev10005112m.g Citrus clementina HOM05D005596 ORTHO05D006994 2.1e-21 105.5 69 79.7
SGA_v2.0_scaffold2G01084 Striga asiatica HOM05D005596 ORTHO05D006994 2.1e-21 105.5 74 73.0
Thecc.03G170100 Theobroma cacao HOM05D005596 ORTHO05D006994 2.1e-21 105.5 69 79.7
CSS0004859 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 2.8e-21 105.1 68 76.5
CSS0017210 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 2.8e-21 105.1 68 76.5
DCAR_018164 Daucus carota HOM05D005596 ORTHO05D006994 2.8e-21 105.1 74 70.3
RcHm_v2.0_Chr1g0376671 Rosa chinensis HOM05D005596 ORTHO05D006994 2.8e-21 105.1 71 77.5
QL09p016060 Quercus lobata HOM05D005596 ORTHO05D006994 4.7e-21 104.4 65 78.5
Atru.chr1.530 Acer truncatum HOM05D005596 ORTHO05D006994 6.2e-21 104.0 69 79.7
VMungo0720G0093 Vigna mungo HOM05D005596 ORTHO05D006994 6.2e-21 104.0 74 74.3
Lalb_Chr06g0160971 Lupinus albus HOM05D005596 ORTHO05D006994 8.1e-21 103.6 69 76.8
SalBow4G2853 Salvia bowleyana HOM05D005596 ORTHO05D006994 8.1e-21 103.6 73 71.2
TWI39G0482 Tripterygium wilfordii HOM05D005596 ORTHO05D006994 8.1e-21 103.6 69 76.8
Peaxi162Scf00648g00016 Petunia axillaris HOM05D005596 ORTHO05D006994 1.4e-20 102.8 70 74.3
Gohir.D09G040500 Gossypium hirsutum HOM05D005596 ORTHO05D006994 4.0e-20 101.3 69 75.4
Gorai.006G046300 Gossypium raimondii HOM05D005596 ORTHO05D006994 4.0e-20 101.3 69 75.4
Hund04701 Selenicereus undatus HOM05D005596 ORTHO05D006994 4.0e-20 101.3 72 75.0
Nitab4.5_0002394g0030 Nicotiana tabacum HOM05D005596 ORTHO05D006994 5.2e-20 100.9 70 72.9
Lj8A29T43 Lonicera japonica HOM05D005596 ORTHO05D006994 6.8e-20 100.5 65 75.4
Oeu022544.2 Olea europaea HOM05D005596 ORTHO05D006994 6.8e-20 100.5 68 73.5
arahy.Tifrunner.gnm1.ann1.8H8JUA Arachis hypogaea HOM05D005596 ORTHO05D006994 8.9e-20 100.1 79 69.6
Cc02_g03410 Coffea canephora HOM05D005596 ORTHO05D006994 1.2e-19 99.8 70 70.0
Nitab4.5_0001083g0020 Nicotiana tabacum HOM05D005596 ORTHO05D006994 1.2e-19 99.8 70 71.4
CANSAT21G1758 Cannabis sativa HOM05D005596 ORTHO05D006994 1.5e-19 99.4 69 75.4
arahy.Tifrunner.gnm1.ann1.EY18QM Arachis hypogaea HOM05D005596 ORTHO05D006994 2.0e-19 99.0 79 68.4
Ca_10798_v3 Cicer arietinum L. HOM05D005596 ORTHO05D006994 2.0e-19 99.0 69 78.3
CAN.G548.11 Capsicum annuum HOM05D005596 ORTHO05D006994 2.6e-19 98.6 70 70.0
Duzib205G1479 Durio zibethinus HOM05D005596 ORTHO05D006994 3.4e-19 98.2 69 76.8
MD01G1196400 Malus domestica HOM05D005596 ORTHO05D006994 3.4e-19 98.2 72 77.8
TAR375G0353 Trochodendron aralioides HOM05D005596 ORTHO05D006994 3.4e-19 98.2 69 75.4
Cpa.g.sc107.2 Carica papaya HOM05D005596 ORTHO05D006994 4.4e-19 97.8 69 71.0
Phvul.007G066540 Phaseolus vulgaris HOM05D005596 ORTHO05D006994 4.4e-19 97.8 65 75.4
TPR.G17416 Trifolium pratense HOM05D005596 ORTHO05D006994 4.4e-19 97.8 69 76.8
MSTRG.8768 Avicennia marina HOM05D005596 ORTHO05D006994 5.8e-19 97.4 69 71.0
MELO3C006872.2 Cucumis melo HOM05D005596 ORTHO05D006994 7.6e-19 97.1 69 73.9
Nn6g34264 Nelumbo nucifera HOM05D005596 ORTHO05D006994 7.6e-19 97.1 69 73.9
Psat6g200160 Pisum sativum HOM05D005596 ORTHO05D006994 7.6e-19 97.1 69 75.4
Solyc03g026260.3 Solanum lycopersicum HOM05D005596 ORTHO05D006994 7.6e-19 97.1 70 68.6
CsaV3_3G016780 Cucumis sativus L. HOM05D005596 ORTHO05D006994 1.3e-18 96.3 69 73.9
Lsat_1_v5_gn_8_7641 Lactuca sativa HOM05D005596 ORTHO05D006994 1.3e-18 96.3 69 72.5
Migut.F00380 Erythranthe guttata HOM05D005596 ORTHO05D006994 2.2e-18 95.5 69 71.0
Medtr1g101540 Medicago truncatula HOM05D005596 ORTHO05D006994 2.9e-18 95.1 69 73.9
PGSC0003DMG400014264 Solanum tuberosum HOM05D005596 ORTHO05D006994 2.9e-18 95.1 69 69.6
AUR62021241 Chenopodium quinoa HOM05D005596 ORTHO05D006994 1.9e-17 92.4 69 71.0
ECA233G5181 Erigeron canadensis HOM05D005596 ORTHO05D006994 2.4e-17 92.0 81 61.7
MBI12_g25031_MAGBIO Magnolia biondii HOM05D005596 ORTHO05D006994 2.4e-17 92.0 69 73.9
PSO478G4610 Papaver somniferum HOM05D005596 ORTHO05D006994 3.2e-17 91.7 69 66.7
PSO782G2992 Papaver somniferum HOM05D005596 ORTHO05D006994 3.2e-17 91.7 69 66.7
PGR142G4172 Punica granatum HOM05D005596 ORTHO05D006994 7.1e-17 90.5 70 72.9
AUR62016035 Chenopodium quinoa HOM05D005596 ORTHO05D006994 9.2e-17 90.1 69 68.1
CDE11G1004 Ceratophyllum demersum HOM05D005596 ORTHO05D006994 1.6e-16 89.4 69 71.0
HanXRQChr13g0405601 Helianthus annuus HOM05D005596 ORTHO05D006994 1.6e-16 89.4 70 68.6
Zm00001eb037540 Zea mays HOM05D005596 ORTHO05D006994 2.1e-16 89.0 69 68.1
CARHR264970 Cardamine hirsuta HOM05D005596 ORTHO05D006994 1.0e-15 86.7 69 63.8
Os08g0545700 Oryza sativa ssp. japonica HOM05D005596 ORTHO05D006994 1.3e-15 86.3 70 65.7
Aa31LG3G8420 Aethionema arabicum HOM05D005596 ORTHO05D006994 1.7e-15 85.9 68 64.7
EL10Ac3g05686 Beta vulgaris HOM05D005596 ORTHO05D006994 8.7e-15 83.6 65 67.7
ClCG05G007790 Citrullus lanatus HOM05D005596 ORTHO05D006994 1.1e-14 83.2 55 78.2
BraA02t06264Z Brassica rapa HOM05D005596 ORTHO05D006994 1.5e-14 82.8 69 63.8
Sed0010012 Sechium edule HOM05D005596 ORTHO05D006994 1.5e-14 82.8 59 72.9
Thhalv10013712m.g Eutrema salsugineum HOM05D005596 ORTHO05D006994 1.9e-14 82.4 69 62.3
Eucgr.K00218 Eucalyptus grandis HOM05D005596 ORTHO05D006994 5.6e-14 80.9 55 76.4
Sp6g14270 Schrenkiella parvula HOM05D005596 ORTHO05D006994 5.6e-14 80.9 68 61.8
BcaB05g23951 Brassica carinata HOM05D005596 ORTHO05D006994 1.2e-13 79.7 70 62.9
BcaC03g14556 Brassica carinata HOM05D005596 ORTHO05D006994 1.2e-13 79.7 67 62.7
C02p20060 Brassica napus HOM05D005596 ORTHO05D006994 1.2e-13 79.7 67 62.7
A02p12010 Brassica napus HOM05D005596 ORTHO05D006994 1.6e-13 79.3 67 62.7
BolC2t08136H Brassica oleracea HOM05D005596 ORTHO05D006994 1.6e-13 79.3 67 62.7
unitig_0.g2489 Utricularia gibba HOM05D005596 ORTHO05D006994 1.6e-13 79.3 69 56.5
AL8G26370 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 2.8e-13 78.6 69 60.9
Carub.0008s1212 Capsella rubella HOM05D005596 ORTHO05D006994 4.7e-13 77.8 69 60.9
ATR0757G105 Amborella trichopoda HOM05D005596 ORTHO05D006994 6.9e-12 73.9 72 52.8
Dinv35175 Davidia involucrata HOM05D005596 ORTHO05D006994 1.2e-11 73.2 51 72.5
AT5G52030 Arabidopsis thaliana HOM05D005596 ORTHO05D006994 2.6e-11 72.0 66 59.1
Zm00001eb183980 Zea mays HOM05D000070 ORTHO05D000722 7.1e-09 63.9 65 56.9
THA.LOC104811480 Tarenaya hassleriana HOM05D005596 ORTHO05D006994 1.3e-07 59.7 69 47.8
CSS0025251 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 1.7e-07 59.3 63 57.1
vmacro06726 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 3.0e-07 58.5 40 72.5
Mapoly0043s0066 Marchantia polymorpha HOM05D005596 ORTHO05D006994 9.6e-06 53.5 79 44.3


User provided reference genes

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