Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 5.0e-117 424.5 217 100.0
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 6.4e-80 301.2 199 75.9
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 1.9e-79 299.7 209 75.6
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 9.2e-79 297.4 199 74.9
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 1.3e-77 293.5 206 72.8
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 3.9e-77 292.0 208 75.0
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 6.6e-77 291.2 208 75.0
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 1.9e-76 289.7 206 71.8
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.9e-76 289.7 208 72.6
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 7.3e-76 287.7 199 73.4
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 1.1e-74 283.9 203 73.4
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 1.1e-74 283.9 201 72.6
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 1.1e-74 283.9 200 72.5
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 1.4e-74 283.5 199 72.9
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 1.4e-74 283.5 208 71.2
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 1.8e-74 283.1 199 73.4
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 1.8e-74 283.1 201 72.1
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 4.0e-74 282.0 201 71.6
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 5.2e-74 281.6 198 69.7
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 6.8e-74 281.2 196 69.4
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 6.8e-74 281.2 209 70.3
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 8.9e-74 280.8 208 71.2
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 8.9e-74 280.8 200 72.0
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.2e-73 280.4 208 70.7
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 2.0e-73 279.6 201 70.6
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 4.4e-73 278.5 208 70.7
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 5.8e-73 278.1 200 70.5
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 5.8e-73 278.1 210 70.0
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 9.8e-73 277.3 208 70.2
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 1.3e-72 276.9 197 68.0
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 1.7e-72 276.6 208 69.7
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 2.2e-72 276.2 208 68.3
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 3.7e-72 275.4 200 70.5
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 4.9e-72 275.0 209 67.9
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.9e-72 275.0 209 67.9
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.9e-72 275.0 209 67.9
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 4.9e-72 275.0 200 71.5
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 4.9e-72 275.0 200 70.0
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 8.3e-72 274.2 210 68.6
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 1.1e-71 273.9 201 69.2
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 1.4e-71 273.5 200 70.5
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 1.4e-71 273.5 209 67.5
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 1.9e-71 273.1 199 69.8
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 1.9e-71 273.1 200 70.0
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.4e-71 272.7 209 67.0
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 3.2e-71 272.3 202 68.8
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 4.1e-71 271.9 207 69.6
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 5.4e-71 271.6 201 71.1
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.2e-70 270.4 209 67.0
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 1.2e-70 270.4 204 68.1
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 1.6e-70 270.0 212 67.0
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 2.1e-70 269.6 205 66.8
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 3.5e-70 268.9 199 68.8
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 3.5e-70 268.9 200 69.5
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 3.5e-70 268.9 219 66.2
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 6.0e-70 268.1 202 70.8
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 6.0e-70 268.1 205 66.8
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 6.0e-70 268.1 203 70.9
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 7.8e-70 267.7 201 68.2
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.8e-70 267.7 209 68.9
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 1.0e-69 267.3 209 67.5
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 1.7e-69 266.5 202 68.3
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 2.3e-69 266.2 199 67.3
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 3.9e-69 265.4 203 69.5
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 5.1e-69 265.0 209 67.9
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 6.6e-69 264.6 208 65.9
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 1.1e-68 263.8 202 68.3
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 1.5e-68 263.5 202 68.3
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 1.9e-68 263.1 212 66.5
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.9e-68 263.1 199 66.8
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 1.9e-68 263.1 198 68.2
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 3.3e-68 262.3 197 67.0
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 4.3e-68 261.9 202 67.8
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 5.6e-68 261.5 200 67.5
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 7.3e-68 261.2 202 67.3
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 7.3e-68 261.2 209 66.0
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 1.2e-67 260.4 200 67.0
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 1.2e-67 260.4 212 67.9
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 1.2e-67 260.4 218 65.1
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 1.2e-67 260.4 200 67.0
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 8.1e-67 257.7 199 65.3
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 1.1e-66 257.3 202 66.8
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 1.1e-66 257.3 196 67.9
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 3.1e-66 255.8 201 66.7
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 4.4e-65 251.9 202 67.3
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 2.2e-64 249.6 201 63.2
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 6.4e-64 248.1 200 64.0
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 5.4e-63 245.0 202 63.9
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 1.2e-62 243.8 205 62.4
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 1.2e-62 243.8 197 62.9
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 3.6e-59 232.3 200 62.0
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 6.4e-56 221.5 195 60.5
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 1.1e-55 220.7 185 63.8
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 7.1e-55 218.0 203 56.2
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 2.8e-51 206.1 185 61.1
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.5e-49 200.3 148 69.6
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 1.7e-48 196.8 142 73.2
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.2e-48 196.4 209 52.6
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 1.1e-44 184.1 147 64.6
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 1.8e-42 176.8 201 50.2
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 8.4e-40 167.9 173 54.9
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.1e-39 167.5 214 45.3
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 5.8e-33 145.2 130 59.2
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 2.4e-26 123.2 92 69.6
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 7.2e-23 111.7 86 66.3
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 4.6e-22 109.0 105 56.2
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.3e-20 102.4 75 65.3
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.4e-18 97.4 74 64.9
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.4e-18 97.4 74 64.9
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.4e-18 97.4 74 64.9
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.1e-18 96.3 74 64.9
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.9e-18 95.1 74 63.5
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.2e-17 94.4 74 63.5
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 2.0e-17 93.6 211 40.3
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 2.0e-17 93.6 74 62.2
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 4.5e-17 92.4 143 42.0
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 6.5e-16 88.6 66 65.2
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 2.5e-15 86.7 66 63.6
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 3.2e-15 86.3 64 68.8
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 7.9e-14 81.6 44 84.1
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 2.0e-09 67.0 109 45.9
Dinv03349 Davidia involucrata HOM05D000126 ORTHO05D185928 4.7e-06 55.8 42 71.4


User provided reference genes

Program Settings