Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28429 Davidia involucrata HOM05D004589 ORTHO05D178633 5.6e-74 280.8 137 100.0
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 2.0e-10 69.7 46 78.3
CSS0039966 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 8.3e-09 64.3 47 72.3
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 3.1e-08 62.4 45 73.3
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 9.1e-08 60.8 68 55.9
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 9.1e-08 60.8 68 55.9
Nn3g20095 Nelumbo nucifera HOM05D000123 ORTHO05D000064 1.2e-07 60.5 34 79.4
Dinv27196 Davidia involucrata HOM05D000123 ORTHO05D000064 5.9e-07 58.2 33 78.8
TAR365G0203 Trochodendron aralioides HOM05D000123 ORTHO05D000064 5.9e-07 58.2 34 73.5
arahy.Tifrunner.gnm1.ann1.KQ4R6B Arachis hypogaea HOM05D000123 ORTHO05D000064 7.7e-07 57.8 32 78.1
arahy.Tifrunner.gnm1.ann1.Q5BT9L Arachis hypogaea HOM05D000123 ORTHO05D000064 7.7e-07 57.8 32 78.1
arahy.Tifrunner.gnm1.ann1.Z4K8EF Arachis hypogaea HOM05D000123 ORTHO05D000064 7.7e-07 57.8 32 78.1
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 1.0e-06 57.4 53 56.6
Prupe.1G165500 Prunus persica HOM05D000123 ORTHO05D000064 1.0e-06 57.4 32 78.1
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 1.7e-06 56.6 46 65.2
Ciclev10006893m.g Citrus clementina HOM05D000123 ORTHO05D000064 1.7e-06 56.6 29 82.8
MELO3C006288.2 Cucumis melo HOM05D000123 ORTHO05D000064 1.7e-06 56.6 36 72.2
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 1.7e-06 56.6 68 52.9
Ca_17986_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 2.3e-06 56.2 31 80.6
CsaV3_3G010690 Cucumis sativus L. HOM05D000123 ORTHO05D000064 2.3e-06 56.2 36 69.4
arahy.Tifrunner.gnm1.ann1.XNB059 Arachis hypogaea HOM05D000123 ORTHO05D000064 2.9e-06 55.8 32 75.0
MD00G1118600 Malus domestica HOM05D000123 ORTHO05D000064 2.9e-06 55.8 31 77.4
RcHm_v2.0_Chr4g0413481 Rosa chinensis HOM05D000123 ORTHO05D000064 2.9e-06 55.8 31 77.4
Sabra17G0053300 Salix brachista HOM05D000123 ORTHO05D000064 3.8e-06 55.5 30 80.0
Sed0020550 Sechium edule HOM05D000123 ORTHO05D000064 3.8e-06 55.5 31 74.2
vmacro15569 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 3.8e-06 55.5 29 82.8
CANSAT78G2525 Cannabis sativa HOM05D000123 ORTHO05D000064 5.0e-06 55.1 34 76.5
Hma1.2p1_0349F.1_g132040 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 5.0e-06 55.1 28 85.7
Lalb_Chr13g0294801 Lupinus albus HOM05D000123 ORTHO05D000064 5.0e-06 55.1 32 75.0
Potri.017G059600 Populus trichocarpa HOM05D000123 ORTHO05D000064 5.0e-06 55.1 30 80.0
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 5.0e-06 55.1 46 63.0
ATR0561G008 Amborella trichopoda HOM05D000123 ORTHO05D000064 6.6e-06 54.7 31 71.0
EL10Ac3g07447 Beta vulgaris HOM05D000123 ORTHO05D000064 6.6e-06 54.7 32 78.1
Rhsim02G0062200 Rhododendron simsii HOM05D000123 ORTHO05D000064 6.6e-06 54.7 29 82.8
Sc19g0007400 Simmondsia chinensis HOM05D000123 ORTHO05D000064 6.6e-06 54.7 31 74.2
Cc03_g08510 Coffea canephora HOM05D000123 ORTHO05D000064 8.6e-06 54.3 32 75.0
FAN07G1179 Fragaria x ananassa HOM05D000123 ORTHO05D000064 8.6e-06 54.3 30 76.7
FAN22G0587 Fragaria x ananassa HOM05D000123 ORTHO05D000064 8.6e-06 54.3 30 76.7
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 8.6e-06 54.3 42 64.3


User provided reference genes

Program Settings