Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 3.5e-89 331.6 173 100.0
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 4.6e-65 251.5 173 73.4
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 2.2e-59 232.6 175 70.3
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 3.8e-59 231.9 181 67.4
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 1.1e-55 220.3 173 63.6
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 1.5e-55 219.9 173 63.6
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 2.5e-55 219.2 173 64.2
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 3.3e-55 218.8 135 77.8
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 5.7e-55 218.0 173 62.4
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 7.4e-55 217.6 173 63.0
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 7.4e-55 217.6 159 71.1
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 9.6e-55 217.2 164 65.9
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 2.1e-54 216.1 175 67.4
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 3.7e-54 215.3 175 65.1
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 1.1e-53 213.8 173 64.7
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 5.3e-53 211.5 165 66.1
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 9.0e-53 210.7 166 68.1
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 2.6e-52 209.1 152 69.7
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 2.6e-52 209.1 173 61.8
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 2.6e-52 209.1 150 67.3
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 2.6e-52 209.1 150 67.3
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 3.4e-52 208.8 113 85.0
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 4.5e-52 208.4 173 64.7
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 5.8e-52 208.0 165 67.3
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 5.8e-52 208.0 173 63.0
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 7.6e-52 207.6 173 63.6
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 7.6e-52 207.6 113 85.8
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 1.0e-51 207.2 113 84.1
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 1.7e-51 206.5 177 62.1
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 3.8e-51 205.3 150 66.7
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 8.4e-51 204.1 146 69.9
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 8.4e-51 204.1 158 66.5
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 8.4e-51 204.1 151 66.2
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 8.4e-51 204.1 109 87.2
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 8.4e-51 204.1 175 62.9
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 8.4e-51 204.1 175 62.9
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 1.9e-50 203.0 173 61.3
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 1.9e-50 203.0 168 63.1
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 1.9e-50 203.0 154 64.9
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 1.9e-50 203.0 116 79.3
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 1.9e-50 203.0 171 61.4
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 2.5e-50 202.6 152 66.4
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 3.2e-50 202.2 189 57.7
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 5.5e-50 201.4 170 62.9
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 5.5e-50 201.4 170 62.9
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 5.5e-50 201.4 113 80.5
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 7.1e-50 201.1 110 83.6
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 9.3e-50 200.7 105 86.7
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 1.2e-49 200.3 173 63.0
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 1.2e-49 200.3 163 63.8
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 1.6e-49 199.9 180 67.8
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.1e-49 199.5 113 80.5
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.1e-49 199.5 113 80.5
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.1e-49 199.5 113 80.5
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 2.1e-49 199.5 168 63.1
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 2.7e-49 199.1 165 62.4
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 2.7e-49 199.1 110 83.6
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.5e-49 198.7 111 81.1
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 3.5e-49 198.7 101 88.1
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 4.6e-49 198.4 160 65.0
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 4.6e-49 198.4 113 79.6
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.6e-49 198.4 111 80.2
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 4.6e-49 198.4 140 72.1
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 4.6e-49 198.4 189 56.6
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 6.1e-49 198.0 113 79.6
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 6.1e-49 198.0 113 79.6
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 7.9e-49 197.6 113 79.6
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 7.9e-49 197.6 131 71.8
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.0e-48 197.2 175 61.1
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 1.3e-48 196.8 113 79.6
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 1.8e-48 196.4 114 80.7
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 1.8e-48 196.4 172 59.9
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 2.3e-48 196.1 167 61.7
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 2.3e-48 196.1 180 62.8
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 3.0e-48 195.7 170 59.4
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 3.9e-48 195.3 171 63.2
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 3.9e-48 195.3 104 84.6
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 3.9e-48 195.3 140 70.7
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 8.7e-48 194.1 158 63.3
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 1.5e-47 193.4 167 59.9
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 1.9e-47 193.0 112 77.7
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 3.3e-47 192.2 167 59.9
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 3.3e-47 192.2 106 81.1
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 3.3e-47 192.2 96 88.5
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 9.7e-47 190.7 142 66.2
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 1.3e-46 190.3 97 87.6
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 2.2e-46 189.5 175 60.0
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 2.8e-46 189.1 98 85.7
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 2.8e-46 189.1 149 63.1
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 3.7e-46 188.7 177 61.0
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 1.1e-45 187.2 182 57.7
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 1.4e-45 186.8 113 76.1
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 5.3e-45 184.9 169 59.8
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 5.3e-45 184.9 120 71.7
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 6.9e-45 184.5 97 87.6
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 1.2e-44 183.7 101 77.2
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 1.2e-44 183.7 98 83.7
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 5.9e-44 181.4 99 80.8
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 2.9e-43 179.1 99 79.8
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 6.5e-43 177.9 243 43.6
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 1.4e-42 176.8 100 80.0
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 6.7e-40 167.9 103 72.8
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 1.5e-39 166.8 173 54.3
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 2.0e-39 166.4 173 53.8
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 5.7e-39 164.9 92 78.3
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 9.7e-39 164.1 91 76.9
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.5e-36 156.8 88 76.1
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 1.6e-33 146.7 137 59.9
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 1.5e-31 140.2 132 56.1
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 2.6e-31 139.4 101 62.4
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 1.3e-30 137.1 98 68.4
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 4.1e-29 132.1 131 55.0
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 2.2e-27 126.3 65 87.7
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 3.6e-25 119.0 116 51.7
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 1.5e-23 113.6 72 68.1
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 7.5e-23 111.3 116 50.0
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 3.5e-12 75.9 36 97.2
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 3.8e-11 72.4 35 91.4


User provided reference genes

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