Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 2.1e-138 495.7 254 100.0
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.9e-115 419.5 253 84.2
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 7.1e-115 417.5 253 84.2
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.9e-113 411.8 253 81.4
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 5.7e-112 407.9 253 80.6
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 9.6e-112 407.1 253 80.6
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.3e-111 406.8 286 73.8
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.6e-111 406.4 253 80.2
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 2.8e-111 405.6 253 81.0
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.8e-110 402.9 253 79.4
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 3.8e-108 395.2 253 75.9
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 2.1e-106 389.4 253 78.3
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 2.7e-106 389.0 266 74.4
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 3.5e-106 388.7 252 77.4
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 6.1e-106 387.9 253 75.1
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.0e-105 387.1 253 77.5
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 2.3e-105 386.0 253 77.9
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 2.3e-105 386.0 252 75.0
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.0e-105 385.6 253 73.9
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.1e-104 383.6 255 74.5
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.5e-104 383.3 255 74.5
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.5e-104 383.3 255 74.5
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.5e-104 383.3 253 76.3
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.5e-104 383.3 254 74.8
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 3.3e-104 382.1 252 75.0
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 5.7e-104 381.3 255 74.1
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.7e-104 381.3 255 74.1
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 5.7e-104 381.3 253 73.5
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 9.7e-104 380.6 253 76.3
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 1.3e-103 380.2 253 72.7
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.6e-103 379.8 255 74.1
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.6e-103 379.8 253 74.7
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 2.2e-103 379.4 252 73.4
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 4.8e-103 378.3 254 75.6
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 6.3e-103 377.9 252 72.2
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 6.3e-103 377.9 252 76.2
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 2.4e-102 375.9 253 74.7
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 3.1e-102 375.6 253 73.9
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 3.1e-102 375.6 253 72.7
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 5.3e-102 374.8 253 75.9
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.2e-101 373.6 253 75.5
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 3.4e-101 372.1 253 73.5
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.5e-101 371.7 251 76.1
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 1.3e-100 370.2 253 74.3
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 8.5e-100 367.5 264 71.6
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.1e-99 367.1 253 74.3
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.5e-99 365.9 253 69.6
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.5e-99 365.9 253 69.6
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 4.2e-99 365.2 253 74.3
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 3.6e-98 362.1 253 70.8
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.4e-97 360.1 254 70.5
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 2.3e-97 359.4 253 70.4
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 3.9e-97 358.6 252 68.7
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 5.1e-97 358.2 254 69.7
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 8.8e-97 357.5 252 68.7
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 9.7e-96 354.0 253 72.3
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 5.3e-94 348.2 258 69.0
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 1.5e-93 346.7 253 68.4
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.5e-93 346.7 251 71.3
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 7.2e-91 337.8 254 66.5
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.2e-90 337.0 254 69.3
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 1.6e-90 336.7 253 68.8
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 4.7e-90 335.1 256 65.6
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 6.1e-90 334.7 254 66.5
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 6.1e-90 334.7 254 66.5
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 7.9e-90 334.3 254 66.9
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.0e-89 334.0 254 66.1
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 1.0e-89 334.0 252 65.1
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.8e-89 333.2 254 66.1
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.8e-89 333.2 254 66.1
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.8e-89 333.2 252 68.7
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.8e-89 333.2 254 66.9
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.3e-89 332.8 206 82.0
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 2.3e-89 332.8 253 68.4
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 3.9e-89 332.0 255 67.5
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 8.8e-89 330.9 254 65.7
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.1e-88 330.5 254 65.4
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.3e-88 328.9 253 65.2
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.8e-87 325.1 255 64.7
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 8.2e-87 324.3 253 66.8
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 1.4e-86 323.6 254 64.2
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.8e-86 323.2 255 65.1
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 3.1e-86 322.4 252 64.7
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 4.1e-86 322.0 254 64.2
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 4.1e-86 322.0 253 64.4
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 9.1e-86 320.9 252 67.5
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 6.5e-84 314.7 253 67.2
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 2.5e-83 312.8 254 67.3
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 3.2e-83 312.4 254 62.2
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 2.1e-82 309.7 242 64.5
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 6.1e-82 308.1 254 61.4
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 2.8e-79 299.3 253 63.6
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 4.1e-78 295.4 253 64.4
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 2.7e-77 292.7 253 65.2
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 2.7e-77 292.7 203 72.4
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.5e-72 276.9 254 60.2
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.8e-70 270.0 253 56.9
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 3.1e-70 269.2 242 61.6
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 4.1e-70 268.9 255 57.3
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 1.5e-67 260.4 262 54.2
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.7e-63 246.9 212 59.0
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 3.7e-63 245.7 252 54.8
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.9e-51 206.8 134 79.1
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 3.3e-51 206.1 251 48.2
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 2.8e-50 203.0 259 44.4
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 4.4e-48 195.7 285 43.2
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 4.4e-48 195.7 252 46.8
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 8.3e-47 191.4 259 43.2
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.0e-44 183.0 259 44.4
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 2.5e-43 179.9 124 69.4
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 6.2e-42 175.3 260 40.4
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 4.0e-41 172.6 123 68.3
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 1.5e-40 170.6 126 69.8
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 4.4e-40 169.1 258 40.3
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 5.8e-40 168.7 119 72.3
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 5.1e-36 155.6 89 82.0
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 6.6e-36 155.2 177 50.3
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.1e-35 154.5 140 62.1
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.9e-35 153.7 120 69.2
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.3e-35 152.9 177 49.7
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 6.0e-29 132.1 120 59.2
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 1.0e-28 131.3 124 54.0
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 1.5e-27 127.5 140 50.0
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.1e-25 119.8 255 34.9
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.0e-24 117.1 133 47.4
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 2.4e-22 110.2 159 45.9
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 7.8e-21 105.1 68 70.6
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 3.1e-17 93.2 50 92.0
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 8.4e-15 85.1 49 77.6
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 3.2e-14 83.2 74 56.8
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.4e-06 57.8 47 66.0


User provided reference genes

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