Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 6.3e-77 290.8 159 100.0
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 9.1e-76 287.0 158 99.4
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.1e-49 200.3 182 63.7
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.1e-49 200.3 182 63.7
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 3.6e-48 195.3 125 80.0
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 8.0e-48 194.1 121 80.2
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 8.0e-48 194.1 125 80.8
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 2.6e-46 189.1 126 79.4
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 3.4e-46 188.7 125 77.6
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 7.5e-46 187.6 119 76.5
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.3e-45 186.8 125 77.6
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.3e-45 186.8 125 76.8
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 1.7e-45 186.4 123 79.7
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 2.2e-45 186.0 159 66.0
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.9e-45 185.7 125 76.8
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 3.7e-45 185.3 125 76.8
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 4.9e-45 184.9 192 58.3
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 6.4e-45 184.5 123 74.8
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.1e-44 183.7 194 56.7
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.9e-44 183.0 151 65.6
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 1.9e-44 183.0 193 56.5
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 2.4e-44 182.6 150 64.0
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 3.2e-44 182.2 125 74.4
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 5.4e-44 181.4 124 71.0
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 5.4e-44 181.4 126 75.4
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 7.0e-44 181.0 124 75.0
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 7.0e-44 181.0 195 54.9
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 9.2e-44 180.6 175 60.6
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 9.2e-44 180.6 127 74.8
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 1.2e-43 180.3 125 73.6
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.2e-43 180.3 125 70.4
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 2.0e-43 179.5 124 71.8
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 2.7e-43 179.1 119 73.9
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 2.7e-43 179.1 191 56.0
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.7e-43 179.1 114 72.8
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 3.5e-43 178.7 124 70.2
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 3.5e-43 178.7 111 78.4
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 3.5e-43 178.7 178 56.7
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 4.6e-43 178.3 191 56.0
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 6.0e-43 177.9 125 69.6
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 6.0e-43 177.9 130 73.1
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 6.0e-43 177.9 127 70.1
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 1.0e-42 177.2 126 70.6
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 1.0e-42 177.2 120 73.3
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 1.3e-42 176.8 125 72.0
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 1.7e-42 176.4 148 64.2
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 1.7e-42 176.4 133 69.2
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 1.7e-42 176.4 149 65.8
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 2.3e-42 176.0 157 62.4
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 2.3e-42 176.0 126 69.8
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 2.3e-42 176.0 192 52.6
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.0e-42 175.6 149 67.8
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.0e-42 175.6 149 67.8
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 3.9e-42 175.3 149 67.8
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.9e-42 175.3 149 67.8
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 3.9e-42 175.3 129 74.4
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 5.0e-42 174.9 125 68.8
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 5.0e-42 174.9 149 67.8
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 5.0e-42 174.9 145 67.6
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 6.6e-42 174.5 159 58.5
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 8.6e-42 174.1 122 70.5
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.1e-41 173.7 149 66.4
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 1.9e-41 172.9 130 70.0
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 2.5e-41 172.6 136 64.0
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 5.6e-41 171.4 127 70.1
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 9.5e-41 170.6 142 65.5
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.6e-40 169.9 123 68.3
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.6e-40 169.9 124 68.5
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 2.1e-40 169.5 114 73.7
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 3.6e-40 168.7 126 68.3
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 3.6e-40 168.7 155 58.1
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 3.6e-40 168.7 127 66.1
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 4.7e-40 168.3 121 68.6
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 8.1e-40 167.5 123 65.9
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 1.1e-39 167.2 144 67.4
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 1.4e-39 166.8 123 65.9
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 1.8e-39 166.4 124 63.7
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 1.8e-39 166.4 122 64.8
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 1.8e-39 166.4 122 64.8
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.8e-39 166.4 124 65.3
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 2.3e-39 166.0 124 63.7
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 3.1e-39 165.6 163 58.9
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 4.0e-39 165.2 124 64.5
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 4.0e-39 165.2 125 66.4
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 4.0e-39 165.2 125 66.4
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 4.0e-39 165.2 124 67.7
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 5.2e-39 164.9 124 64.5
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 5.2e-39 164.9 124 64.5
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 6.8e-39 164.5 122 63.9
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 6.8e-39 164.5 122 63.9
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 6.8e-39 164.5 122 63.9
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 6.8e-39 164.5 122 66.4
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 6.8e-39 164.5 122 63.9
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 8.9e-39 164.1 148 58.1
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 1.2e-38 163.7 121 72.7
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 1.5e-38 163.3 122 62.3
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 3.4e-38 162.2 124 63.7
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 3.4e-38 162.2 122 63.9
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 9.8e-38 160.6 164 55.5
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.9e-37 159.1 105 73.3
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.4e-36 156.8 90 82.2
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 2.4e-36 156.0 124 73.4
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 5.4e-36 154.8 125 65.6
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 5.4e-36 154.8 121 62.0
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 2.3e-34 149.4 149 60.4
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 4.0e-31 138.7 98 73.5
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.2e-30 137.1 89 74.2
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 5.8e-30 134.8 99 70.7
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 9.9e-30 134.0 131 58.0
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 2.2e-29 132.9 149 54.4
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 3.7e-29 132.1 98 71.4
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 1.4e-28 130.2 122 50.8
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 1.4e-28 130.2 111 63.1
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.4e-28 129.4 104 63.5
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 5.4e-28 128.3 109 55.0
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 1.3e-26 123.6 123 49.6
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 4.3e-25 118.6 147 44.2
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 5.6e-25 118.2 154 44.2
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 9.0e-15 84.3 127 46.5
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 2.0e-14 83.2 158 35.4
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.4e-12 77.0 65 63.1
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.9e-12 76.6 92 43.5
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.1e-09 67.4 61 52.5
Manes.01G158400 Manihot esculenta HOM05D006312 ORTHO05D007843 2.4e-07 59.7 65 53.8
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 1.5e-06 57.0 81 40.7


User provided reference genes

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