Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28216 Davidia involucrata HOM05D000401 ORTHO05D000252 2.4e-81 305.4 157 100.0
Dinv25250 Davidia involucrata HOM05D000401 ORTHO05D000252 4.1e-20 102.1 77 75.3
Dinv12321 Davidia involucrata HOM05D000401 ORTHO05D000252 3.5e-19 99.0 68 83.8
Peaxi162Scf00419g00061 Petunia axillaris HOM05D000401 ORTHO05D000252 7.5e-14 81.3 66 72.7
MSTRG.10392 Avicennia marina HOM05D000401 ORTHO05D000252 1.7e-13 80.1 84 57.1
unitig_8.g4298 Utricularia gibba HOM05D000401 ORTHO05D000252 1.7e-13 80.1 77 58.4
SGA_v2.0_scaffold31G12875 Striga asiatica HOM05D000401 ORTHO05D000252 2.2e-13 79.7 65 67.7
TAR633G1357 Trochodendron aralioides HOM05D000401 ORTHO05D000252 4.9e-13 78.6 106 49.1
SGA_v2.0_scaffold13G06666 Striga asiatica HOM05D000401 ORTHO05D000252 6.3e-13 78.2 67 65.7
Cc06_g06340 Coffea canephora HOM05D000401 ORTHO05D000252 8.3e-13 77.8 66 66.7
Hma1.2p1_1442F.1_g283810 Hydrangea macrophylla HOM05D000401 ORTHO05D000252 8.3e-13 77.8 77 64.9
Oeu028655.1 Olea europaea HOM05D000401 ORTHO05D000252 8.3e-13 77.8 62 72.6
Oeu020326.1 Olea europaea HOM05D000401 ORTHO05D000252 1.1e-12 77.4 79 57.0
Nitab4.5_0000665g0030 Nicotiana tabacum HOM05D000401 ORTHO05D000252 3.1e-12 75.9 121 45.5
Actinidia32059 Actinidia chinensis HOM05D000401 ORTHO05D000252 7.0e-12 74.7 50 76.0
SalBow5G1925 Salvia bowleyana HOM05D000401 ORTHO05D000252 7.0e-12 74.7 60 68.3
Oeu017710.1 Olea europaea HOM05D000401 ORTHO05D000252 1.2e-11 73.9 49 79.6
CiPaw.09G018600 Carya illinoinensis HOM05D000401 ORTHO05D000252 1.6e-11 73.6 77 57.1
Nn6g34761 Nelumbo nucifera HOM05D000401 ORTHO05D000252 1.6e-11 73.6 107 46.7
Potri.016G072800 Populus trichocarpa HOM05D000401 ORTHO05D000252 2.7e-11 72.8 127 40.9
Migut.J00682 Erythranthe guttata HOM05D000401 ORTHO05D000252 4.5e-11 72.0 49 73.5
Oeu017713.1 Olea europaea HOM05D000401 ORTHO05D000252 5.9e-11 71.6 62 69.4
MSTRG.26611 Avicennia marina HOM05D000401 ORTHO05D000252 1.3e-10 70.5 50 76.0
Cfa016667 Carpinus fangiana HOM05D000401 ORTHO05D000252 1.3e-10 70.5 77 58.4
Nitab4.5_0000020g0380 Nicotiana tabacum HOM05D000401 ORTHO05D000252 1.3e-10 70.5 45 82.2
DCAR_013429 Daucus carota HOM05D000401 ORTHO05D000252 1.7e-10 70.1 65 60.0
Oeu009306.1 Olea europaea HOM05D000401 ORTHO05D000252 1.7e-10 70.1 49 73.5
Rhsim03G0067200 Rhododendron simsii HOM05D000401 ORTHO05D000252 1.7e-10 70.1 74 56.8
Atru.chr8.1398 Acer truncatum HOM05D000401 ORTHO05D000252 2.9e-10 69.3 78 53.8
CSS0026016 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 2.9e-10 69.3 49 71.4
CiPaw.10G015200 Carya illinoinensis HOM05D000401 ORTHO05D000252 2.9e-10 69.3 64 60.9
PGSC0003DMG400016415 Solanum tuberosum HOM05D000401 ORTHO05D000252 2.9e-10 69.3 64 60.9
Prupe.7G098400 Prunus persica HOM05D000401 ORTHO05D000252 5.0e-10 68.6 70 58.6
CSS0001051 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 6.6e-10 68.2 44 79.5
Migut.L01818 Erythranthe guttata HOM05D000401 ORTHO05D000252 8.6e-10 67.8 68 58.8
unitig_26.g9143 Utricularia gibba HOM05D000401 ORTHO05D000252 8.6e-10 67.8 68 61.8
QL07p037519 Quercus lobata HOM05D000401 ORTHO05D000252 1.1e-09 67.4 56 62.5
Haze_19678 Corylus avellana HOM05D000401 ORTHO05D000252 2.5e-09 66.2 63 63.5
ECA233G4117 Erigeron canadensis HOM05D000401 ORTHO05D000252 2.5e-09 66.2 62 58.1
Solyc01g007800.3 Solanum lycopersicum HOM05D000401 ORTHO05D000252 2.5e-09 66.2 60 61.7
Sopen01g003340 Solanum pennellii HOM05D000401 ORTHO05D000252 2.5e-09 66.2 60 61.7
FAN14G5813 Fragaria x ananassa HOM05D012971 ORTHO05D000252 4.3e-09 65.5 61 57.4
FvH4_6g19871 Fragaria vesca HOM05D000401 ORTHO05D000252 5.6e-09 65.1 61 57.4
FAN05G5547 Fragaria x ananassa HOM05D000401 ORTHO05D000252 5.6e-09 65.1 61 57.4
FAN05G5747 Fragaria x ananassa HOM05D000401 ORTHO05D000252 5.6e-09 65.1 61 57.4
HanXRQChr13g0398191 Helianthus annuus HOM05D000401 ORTHO05D000252 7.3e-09 64.7 46 67.4
Potri.006G205400 Populus trichocarpa HOM05D000401 ORTHO05D000252 7.3e-09 64.7 65 56.9
Sabra16G0075700 Salix brachista HOM05D000401 ORTHO05D000252 7.3e-09 64.7 124 38.7
Ciclev10013812m.g Citrus clementina HOM05D000401 ORTHO05D000252 9.5e-09 64.3 82 47.6
Eucgr.A02608 Eucalyptus grandis HOM05D000401 ORTHO05D000252 9.5e-09 64.3 57 63.2
Sabra06G0158400 Salix brachista HOM05D000401 ORTHO05D000252 1.2e-08 63.9 125 37.6
RcHm_v2.0_Chr3g0475301 Rosa chinensis HOM05D000401 ORTHO05D000252 1.6e-08 63.5 61 57.4
unitig_22.g5138 Utricularia gibba HOM05D000401 ORTHO05D000252 1.6e-08 63.5 49 69.4
FAN09G2763 Fragaria x ananassa HOM05D000401 ORTHO05D000252 2.1e-08 63.2 61 55.7
TAR623G1614 Trochodendron aralioides HOM05D000401 ORTHO05D000252 2.1e-08 63.2 64 57.8
FAN02G1920 Fragaria x ananassa HOM05D000401 ORTHO05D000252 2.8e-08 62.8 61 55.7
Glyma.03G200200 Glycine max HOM05D000401 ORTHO05D000252 2.8e-08 62.8 68 55.9
Gorai.009G398100 Gossypium raimondii HOM05D000401 ORTHO05D000252 2.8e-08 62.8 69 53.6
MD14G1035700 Malus domestica HOM05D000401 ORTHO05D000252 2.8e-08 62.8 46 69.6
Gohir.A04G061400 Gossypium hirsutum HOM05D000401 ORTHO05D000252 3.6e-08 62.4 69 53.6
Gohir.D04G095400 Gossypium hirsutum HOM05D000401 ORTHO05D000252 3.6e-08 62.4 74 51.4
Lalb_Chr20g0111481 Lupinus albus HOM05D000401 ORTHO05D000252 3.6e-08 62.4 122 40.2
Gohir.A09G136900 Gossypium hirsutum HOM05D000401 ORTHO05D000252 6.1e-08 61.6 127 37.8
Sopen10g032560 Solanum pennellii HOM05D000401 ORTHO05D000252 6.1e-08 61.6 64 57.8
Ah.08g210190 Amaranthus hybridus HOM05D000401 ORTHO05D000252 8.0e-08 61.2 111 36.0
ClCG04G010340 Citrullus lanatus HOM05D000401 ORTHO05D000252 8.0e-08 61.2 60 55.0
Nitab4.5_0009761g0010 Nicotiana tabacum HOM05D000401 ORTHO05D000252 8.0e-08 61.2 50 66.0
VMungo1383G2057 Vigna mungo HOM05D000401 ORTHO05D000252 1.0e-07 60.8 61 59.0
Ca_09040_v3 Cicer arietinum L. HOM05D000401 ORTHO05D000252 1.4e-07 60.5 131 37.4
Duzib093G1461 Durio zibethinus HOM05D000401 ORTHO05D000252 1.4e-07 60.5 64 54.7
PGSC0003DMG400028155 Solanum tuberosum HOM05D000401 ORTHO05D000252 1.4e-07 60.5 70 51.4
Gohir.A01G137708 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.8e-07 60.1 130 33.8
Hma1.2p1_0064F.1_g034860 Hydrangea macrophylla HOM05D000401 ORTHO05D000252 1.8e-07 60.1 45 66.7
Manes.09G048700 Manihot esculenta HOM05D000401 ORTHO05D000252 1.8e-07 60.1 65 52.3
Gohir.D09G132300 Gossypium hirsutum HOM05D000401 ORTHO05D000252 2.3e-07 59.7 126 37.3
Lsat_1_v5_gn_6_35220 Lactuca sativa HOM05D000401 ORTHO05D000252 2.3e-07 59.7 64 57.8
Lj1g0008900 Lotus japonicus HOM05D000401 ORTHO05D000252 2.3e-07 59.7 63 57.1
TPR.G39816 Trifolium pratense HOM05D000401 ORTHO05D000252 2.3e-07 59.7 131 37.4
Duzib106G1070 Durio zibethinus HOM05D000401 ORTHO05D000252 3.0e-07 59.3 129 39.5
Gorai.006G150900 Gossypium raimondii HOM05D000401 ORTHO05D000252 3.0e-07 59.3 127 37.8
Manes.08G031200 Manihot esculenta HOM05D000401 ORTHO05D000252 3.0e-07 59.3 64 53.1
Lalb_Chr25g0288101 Lupinus albus HOM05D000401 ORTHO05D000252 4.0e-07 58.9 75 45.3
Gohir.D01G126800 Gossypium hirsutum HOM05D000401 ORTHO05D000252 5.2e-07 58.5 105 36.2
Phvul.001G194020 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 5.2e-07 58.5 52 55.8
Thecc.05G100600 Theobroma cacao HOM05D000401 ORTHO05D000252 5.2e-07 58.5 41 68.3
DCAR_020721 Daucus carota HOM05D000401 ORTHO05D000252 6.8e-07 58.2 65 56.9
Gohir.A01G202600 Gossypium hirsutum HOM05D000401 ORTHO05D000252 6.8e-07 58.2 77 46.8
HanXRQChr02g0053811 Helianthus annuus HOM05D000401 ORTHO05D000252 6.8e-07 58.2 45 62.2
Lalb_Chr02g0154621 Lupinus albus HOM05D000401 ORTHO05D000252 6.8e-07 58.2 64 48.4
Medtr7g105790 Medicago truncatula HOM05D000401 ORTHO05D000252 6.8e-07 58.2 128 35.2
Solyc10g082050.1 Solanum lycopersicum HOM05D000401 ORTHO05D000252 6.8e-07 58.2 77 45.5
CAN.G574.37 Capsicum annuum HOM05D000401 ORTHO05D000252 8.9e-07 57.8 36 77.8
Gorai.002G236400 Gossypium raimondii HOM05D000401 ORTHO05D000252 8.9e-07 57.8 72 50.0
PGR004G2527 Punica granatum HOM05D000401 ORTHO05D000252 8.9e-07 57.8 53 62.3
CAN.G598.1 Capsicum annuum HOM05D000401 ORTHO05D000252 1.2e-06 57.4 50 62.0
Dinv22793 Davidia involucrata HOM05D000401 ORTHO05D000252 1.2e-06 57.4 86 48.8
Gohir.D01G192600 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.2e-06 57.4 71 49.3
Aqoxy4G02686 Aquilegia oxysepala HOM05D000401 ORTHO05D000252 3.4e-06 55.8 64 57.8
Gorai.002G157300 Gossypium raimondii HOM05D000401 ORTHO05D000252 3.4e-06 55.8 105 35.2
Psat3g030280 Pisum sativum HOM05D000401 ORTHO05D000252 3.4e-06 55.8 128 38.3
CANSAT64G0615 Cannabis sativa HOM05D000401 ORTHO05D000252 5.8e-06 55.1 37 70.3
Sabra12G0068600 Salix brachista HOM05D000401 ORTHO05D000252 5.8e-06 55.1 37 67.6
Ca_11720_v3 Cicer arietinum L. HOM05D000401 ORTHO05D000252 7.5e-06 54.7 37 67.6
Psat6g083040 Pisum sativum HOM05D000401 ORTHO05D000252 7.5e-06 54.7 50 58.0
TPR.G8731 Trifolium pratense HOM05D000401 ORTHO05D000252 7.5e-06 54.7 74 44.6
VMungo0720G2229 Vigna mungo HOM05D000401 ORTHO05D000252 7.5e-06 54.7 62 50.0


User provided reference genes

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