Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 5.0e-138 494.6 276 100.0
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 5.4e-92 341.7 277 73.6
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 6.0e-91 338.2 277 74.0
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 7.6e-86 321.2 287 70.0
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 1.9e-84 316.6 276 72.5
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 1.0e-82 310.8 276 70.7
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 2.1e-80 303.1 277 68.6
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 4.7e-80 302.0 276 68.1
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 1.1e-79 300.8 276 69.9
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 2.6e-78 296.2 274 69.7
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 3.4e-78 295.8 276 69.6
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 1.3e-77 293.9 283 66.1
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 8.4e-77 291.2 276 66.7
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 7.1e-76 288.1 275 68.0
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 9.3e-76 287.7 315 56.5
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 2.7e-75 286.2 274 67.9
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 5.1e-74 282.0 276 68.5
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 6.6e-74 281.6 275 67.6
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 6.6e-74 281.6 285 66.3
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 1.1e-73 280.8 275 65.8
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.6e-72 276.9 277 66.1
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 2.8e-72 276.2 278 65.8
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.1e-71 274.2 277 65.7
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 1.4e-71 273.9 254 67.7
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 1.8e-71 273.5 277 65.7
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.8e-71 273.5 277 65.0
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 1.8e-71 273.5 275 66.2
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 2.0e-70 270.0 276 66.3
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.7e-69 266.9 204 77.5
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 1.1e-68 264.2 237 70.5
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 2.7e-67 259.6 276 62.7
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 1.3e-66 257.3 253 63.2
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 3.0e-66 256.1 254 65.4
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 8.7e-66 254.6 237 66.7
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 5.6e-65 251.9 257 61.9
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 9.6e-65 251.1 274 63.9
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 6.2e-64 248.4 274 63.5
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 1.4e-63 247.3 276 60.5
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 1.8e-63 246.9 257 62.6
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 5.3e-63 245.4 277 59.9
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.2e-62 244.2 274 62.8
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 2.0e-62 243.4 276 62.7
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 5.8e-62 241.9 275 59.3
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 7.6e-62 241.5 228 67.5
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 1.3e-61 240.7 277 59.2
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 2.9e-61 239.6 228 67.1
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 1.4e-60 237.3 275 60.0
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 7.1e-60 235.0 257 61.9
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.6e-59 233.8 219 68.5
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 2.7e-59 233.0 257 61.1
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 1.8e-58 230.3 257 60.3
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 8.7e-58 228.0 273 57.9
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 2.5e-57 226.5 281 59.8
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 5.6e-57 225.3 276 58.7
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 2.8e-56 223.0 256 57.4
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 1.8e-55 220.3 279 51.6
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 3.1e-55 219.5 324 51.9
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 6.9e-55 218.4 278 57.6
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 2.6e-54 216.5 275 53.8
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 2.6e-54 216.5 256 59.0
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 2.9e-53 213.0 275 53.1
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 2.9e-53 213.0 273 56.4
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 2.9e-53 213.0 274 55.5
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 6.5e-53 211.8 272 56.6
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 1.4e-52 210.7 280 55.0
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 2.5e-52 209.9 273 55.7
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 4.2e-52 209.1 164 84.1
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 4.2e-52 209.1 257 56.0
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 2.7e-51 206.5 274 55.1
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 3.5e-51 206.1 224 60.7
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 3.5e-51 206.1 274 53.6
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 1.3e-50 204.1 275 57.8
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 1.5e-49 200.7 257 58.0
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 3.3e-49 199.5 273 53.8
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 4.3e-49 199.1 275 54.9
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 7.4e-49 198.4 198 68.2
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 3.7e-48 196.1 203 67.5
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 4.1e-47 192.6 274 53.6
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 2.0e-46 190.3 273 53.8
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 3.4e-46 189.5 203 67.0
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 1.0e-45 188.0 207 64.7
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 1.0e-45 188.0 203 66.5
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 1.7e-45 187.2 205 65.4
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 2.9e-45 186.4 275 49.1
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 3.8e-45 186.0 207 65.7
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 3.8e-45 186.0 207 65.7
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 6.5e-45 185.3 222 64.0
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 1.4e-44 184.1 140 87.9
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 1.4e-44 184.1 277 54.9
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 1.9e-44 183.7 207 65.2
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 1.9e-44 183.7 273 54.9
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 1.9e-44 183.7 277 54.9
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 1.9e-44 183.7 273 54.9
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 1.9e-44 183.7 207 65.2
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 1.9e-44 183.7 273 54.9
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 5.5e-44 182.2 260 52.3
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 5.5e-44 182.2 219 58.9
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 1.2e-43 181.0 273 53.8
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 1.2e-43 181.0 279 51.6
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 2.3e-42 176.8 164 76.8
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 3.9e-42 176.0 223 61.4
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 1.5e-41 174.1 237 52.7
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 1.1e-36 157.9 172 62.2
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.1e-33 147.9 160 61.2
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 7.4e-33 145.2 174 62.6
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 5.0e-29 132.5 81 84.0
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 6.5e-29 132.1 125 60.8
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 1.1e-23 114.8 100 66.0
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 9.1e-23 111.7 82 67.1
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 2.2e-16 90.5 163 33.1
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 8.3e-16 88.6 168 35.1
FAN28G0752 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.4e-15 87.8 110 47.3
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 9.1e-15 85.1 146 52.1
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 2.9e-13 80.1 150 48.0
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 2.5e-12 77.0 154 46.8
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 4.7e-11 72.8 66 54.5
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 6.1e-11 72.4 68 52.9
unitig_736.g22595 Utricularia gibba HOM05D006243 ORTHO05D007688 6.8e-10 68.9 127 32.3
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 1.3e-08 64.7 128 49.2


User provided reference genes

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