Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28182 Davidia involucrata HOM05D008015 ORTHO05D009180 4.2e-74 281.2 135 100.0
Potri.004G085100 Populus trichocarpa HOM05D008015 ORTHO05D009180 1.5e-18 96.7 176 39.8
TAR371G1005 Trochodendron aralioides HOM05D008015 ORTHO05D009180 3.6e-17 92.0 171 39.8
QL02p059324 Quercus lobata HOM05D008015 ORTHO05D009180 5.3e-16 88.2 178 36.5
Nn4g24386 Nelumbo nucifera HOM05D008015 ORTHO05D009180 6.9e-16 87.8 175 36.0
TAR629G2519 Trochodendron aralioides HOM05D008015 ORTHO05D009180 3.4e-15 85.5 174 36.8
CSS0009801 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 5.8e-15 84.7 164 37.8
CSS0018355 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 5.8e-15 84.7 164 37.8
Ciclev10012847m.g Citrus clementina HOM05D008015 ORTHO05D009180 4.9e-14 81.6 169 34.3
Potri.017G131300 Populus trichocarpa HOM05D008015 ORTHO05D009180 4.9e-14 81.6 173 33.5
Oeu032314.1 Olea europaea HOM05D008015 ORTHO05D009180 1.4e-13 80.1 166 32.5
Sabra17G0109400 Salix brachista HOM05D008015 ORTHO05D009180 1.9e-13 79.7 179 37.4
Lalb_Chr18g0053531 Lupinus albus HOM05D008015 ORTHO05D009180 3.2e-13 79.0 154 36.4
Cfa007792 Carpinus fangiana HOM05D008015 ORTHO05D009180 4.2e-13 78.6 186 33.3
VMungo0647G1978 Vigna mungo HOM05D008015 ORTHO05D009180 1.2e-12 77.0 153 37.3
DCAR_014163 Daucus carota HOM05D008015 ORTHO05D009180 1.6e-12 76.6 172 36.0
Nn3g18370 Nelumbo nucifera HOM05D008015 ORTHO05D009180 2.7e-12 75.9 52 69.2
Cc07_g13270 Coffea canephora HOM05D008015 ORTHO05D009180 2.3e-11 72.8 52 67.3
Glyma.18G041300 Glycine max HOM05D008015 ORTHO05D009180 3.0e-11 72.4 51 66.7
Eucgr.F02874 Eucalyptus grandis HOM05D008015 ORTHO05D009180 8.7e-11 70.9 54 63.0
Glyma.14G213100 Glycine max HOM05D008015 ORTHO05D009180 1.5e-10 70.1 172 33.7
CiPaw.03G073500 Carya illinoinensis HOM05D008015 ORTHO05D009180 1.9e-10 69.7 188 30.9
Lalb_Chr15g0084981 Lupinus albus HOM05D008015 ORTHO05D009180 1.9e-10 69.7 159 35.8
PGR004G2766 Punica granatum HOM05D009275 ORTHO05D009180 1.9e-10 69.7 64 53.1
Actinidia35723 Actinidia chinensis HOM05D008015 ORTHO05D009180 2.5e-10 69.3 51 62.7
Manes.02G078100 Manihot esculenta HOM05D008015 ORTHO05D009180 3.3e-10 68.9 65 61.5
MBI13_g24899_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 9.6e-10 67.4 45 64.4
MBI19_g08383_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.6e-09 66.6 168 32.7
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 2.8e-09 65.9 172 32.6
Actinidia17202 Actinidia chinensis HOM05D008015 ORTHO05D009180 3.7e-09 65.5 145 37.9
MBI13_g45895_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 8.2e-09 64.3 45 62.2
Thecc.04G053900 Theobroma cacao HOM05D008015 ORTHO05D009180 1.1e-08 63.9 50 64.0
TWI77G0273 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 1.1e-08 63.9 162 32.1
Lalb_Chr17g0346041 Lupinus albus HOM05D008015 ORTHO05D009180 1.8e-08 63.2 55 56.4
Actinidia28799 Actinidia chinensis HOM05D008015 ORTHO05D009180 4.0e-08 62.0 61 49.2
SalBow5G5173 Salvia bowleyana HOM05D008015 ORTHO05D009180 4.0e-08 62.0 134 35.8
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 1.2e-07 60.5 180 30.6
Prupe.3G166400 Prunus persica HOM05D008015 ORTHO05D009180 1.2e-07 60.5 54 59.3
CANSAT35G1526 Cannabis sativa HOM05D008015 ORTHO05D009180 1.5e-07 60.1 151 34.4
ClCG03G008850 Citrullus lanatus HOM05D008015 ORTHO05D009180 2.0e-07 59.7 67 50.7
Rhsim10G0178500 Rhododendron simsii HOM05D008015 ORTHO05D009180 2.6e-07 59.3 174 33.3
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 4.5e-07 58.5 52 59.6
ATR0753G067 Amborella trichopoda HOM05D008015 ORTHO05D009180 5.8e-07 58.2 40 65.0
VMungo1383G2632 Vigna mungo HOM05D008015 ORTHO05D009180 1.0e-06 57.4 51 52.9
MELO3C022825.2 Cucumis melo HOM05D008015 ORTHO05D009180 1.7e-06 56.6 67 49.3
Cpa.g.sc340.4 Carica papaya HOM05D008015 ORTHO05D009180 2.2e-06 56.2 70 48.6
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 2.2e-06 56.2 56 57.1
Phvul.001G229400 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 2.9e-06 55.8 51 52.9
Sed0025761 Sechium edule HOM05D008015 ORTHO05D009180 3.8e-06 55.5 47 53.2
FvH4_1g30203 Fragaria vesca HOM05D008015 ORTHO05D009180 4.9e-06 55.1 49 46.9
FAN26G1918 Fragaria x ananassa HOM05D008015 ORTHO05D009180 4.9e-06 55.1 49 46.9
FAN23G1273 Fragaria x ananassa HOM05D008015 ORTHO05D009180 6.5e-06 54.7 49 44.9
CDE05G1037 Ceratophyllum demersum HOM05D008015 ORTHO05D009180 8.4e-06 54.3 56 51.8
RcHm_v2.0_Chr3g0491241 Rosa chinensis HOM05D008015 ORTHO05D009180 8.4e-06 54.3 52 53.8


User provided reference genes

Program Settings