Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28087 Davidia involucrata HOM05D000126 ORTHO05D178607 3.1e-62 241.5 114 100.0
Dinv19898 Davidia involucrata HOM05D000777 ORTHO05D000595 8.4e-15 84.0 41 87.8
Gohir.A11G028450 Gossypium hirsutum HOM05D000126 ORTHO05D000085 9.3e-14 80.5 41 85.4
Gohir.D11G031700 Gossypium hirsutum HOM05D000126 ORTHO05D000085 9.3e-14 80.5 41 85.4
Gorai.007G034600 Gossypium raimondii HOM05D000126 ORTHO05D000085 9.3e-14 80.5 41 85.4
Atru.chr9.2352 Acer truncatum HOM05D000126 ORTHO05D000085 3.5e-13 78.6 41 78.0
RcHm_v2.0_Chr7g0180181 Rosa chinensis HOM05D000126 ORTHO05D000085 4.6e-13 78.2 41 80.5
Haze_07400 Corylus avellana HOM05D000126 ORTHO05D000085 1.0e-12 77.0 43 76.7
QL10p014586 Quercus lobata HOM05D000126 ORTHO05D000085 1.8e-12 76.3 41 80.5
CiPaw.11G035100 Carya illinoinensis HOM05D000126 ORTHO05D000085 2.3e-12 75.9 38 86.8
Thecc.03G075700 Theobroma cacao HOM05D000126 ORTHO05D000085 2.3e-12 75.9 41 75.6
Cfa019025 Carpinus fangiana HOM05D000126 ORTHO05D000085 3.0e-12 75.5 43 74.4
Dinv13648 Davidia involucrata HOM05D000001 ORTHO05D000003 6.7e-12 74.3 65 56.9
Lj4g0019747 Lotus japonicus HOM05D000126 ORTHO05D000085 8.7e-12 73.9 41 75.6
Prupe.5G183800 Prunus persica HOM05D000126 ORTHO05D000085 1.5e-11 73.2 40 75.0
CANSAT80G2216 Cannabis sativa HOM05D000126 ORTHO05D000085 1.9e-11 72.8 41 78.0
Duzib205G1031 Durio zibethinus HOM05D000126 ORTHO05D000085 2.5e-11 72.4 41 70.7
Medtr4g107370 Medicago truncatula HOM05D000126 ORTHO05D000085 3.3e-11 72.0 38 81.6
Lalb_Chr13g0298081 Lupinus albus HOM05D000126 ORTHO05D000085 5.6e-11 71.2 41 73.2
Eucgr.K02905 Eucalyptus grandis HOM05D000126 ORTHO05D000085 7.4e-11 70.9 38 78.9
Manes.06G098000 Manihot esculenta HOM05D000126 ORTHO05D000085 9.6e-11 70.5 42 69.0
Psat4g054280 Pisum sativum HOM05D000126 ORTHO05D000085 9.6e-11 70.5 38 78.9
Lj9P457T52 Lonicera japonica HOM05D000126 ORTHO05D000085 1.6e-10 69.7 38 76.3
Sabra12G0051600 Salix brachista HOM05D000126 ORTHO05D000085 1.6e-10 69.7 41 73.2
TPR.G38393 Trifolium pratense HOM05D000126 ORTHO05D000085 1.6e-10 69.7 38 78.9
CiPaw.11G035700 Carya illinoinensis HOM05D000126 ORTHO05D000085 2.1e-10 69.3 37 78.4
TAR038G0004 Trochodendron aralioides HOM05D000126 ORTHO05D000085 2.1e-10 69.3 42 69.0
CiPaw.11G035600 Carya illinoinensis HOM05D000126 ORTHO05D000085 2.8e-10 68.9 41 65.9
arahy.Tifrunner.gnm1.ann1.J01V7K Arachis hypogaea HOM05D000126 ORTHO05D000085 3.6e-10 68.6 41 73.2
arahy.Tifrunner.gnm1.ann1.V0EC7N Arachis hypogaea HOM05D000126 ORTHO05D000085 3.6e-10 68.6 41 73.2
Ca_21864_v3 Cicer arietinum L. HOM05D000126 ORTHO05D000085 6.2e-10 67.8 38 76.3
PGR044G2594 Punica granatum HOM05D000126 ORTHO05D000085 6.2e-10 67.8 41 68.3
Glyma.05G031400 Glycine max HOM05D000126 ORTHO05D000085 1.1e-09 67.0 36 75.0
Rhsim08G0162400 Rhododendron simsii HOM05D000126 ORTHO05D000085 1.1e-09 67.0 37 75.7
CiPaw.11G035200 Carya illinoinensis HOM05D000126 ORTHO05D000085 1.4e-09 66.6 43 58.1
Ciclev10019846m.g Citrus clementina HOM05D000126 ORTHO05D000085 1.4e-09 66.6 41 70.7
COL.COLO4_33405 Corchorus olitorius HOM05D000126 ORTHO05D000085 1.4e-09 66.6 40 67.5
TAR218G0002 Trochodendron aralioides HOM05D000126 ORTHO05D000085 1.4e-09 66.6 42 69.0
TAR371G0338 Trochodendron aralioides HOM05D000126 ORTHO05D000085 1.4e-09 66.6 42 69.0
Manes.14G073200 Manihot esculenta HOM05D000126 ORTHO05D000085 1.8e-09 66.2 38 71.1
Glyma.17G095500 Glycine max HOM05D000126 ORTHO05D000085 2.4e-09 65.9 38 71.1
Phvul.003G194800 Phaseolus vulgaris HOM05D000126 ORTHO05D000085 2.4e-09 65.9 38 73.7
Actinidia04940 Actinidia chinensis HOM05D000126 ORTHO05D000085 3.1e-09 65.5 40 72.5
FAN13G2647 Fragaria x ananassa HOM05D000126 ORTHO05D000085 3.1e-09 65.5 41 68.3
MD14G1190900 Malus domestica HOM05D000126 ORTHO05D000085 4.0e-09 65.1 42 69.0
vmacro19330 Vaccinium macrocarpon HOM05D000126 ORTHO05D000085 4.0e-09 65.1 37 73.0
CSS0002097 Camellia sinensis var. sinensis HOM05D000126 ORTHO05D000085 5.3e-09 64.7 38 68.4
FvH4_5g15870 Fragaria vesca HOM05D000126 ORTHO05D000085 6.9e-09 64.3 41 65.9
FAN18G1841 Fragaria x ananassa HOM05D000126 ORTHO05D000085 6.9e-09 64.3 41 65.9
FAN04G2123 Fragaria x ananassa HOM05D000126 ORTHO05D000085 9.0e-09 63.9 41 65.9
Potri.015G067400 Populus trichocarpa HOM05D000126 ORTHO05D000085 9.0e-09 63.9 41 70.7
Sabra15G0092200 Salix brachista HOM05D000126 ORTHO05D000085 9.0e-09 63.9 39 71.8
Rhsim08G0179600 Rhododendron simsii HOM05D000126 ORTHO05D000085 1.2e-08 63.5 37 70.3
RhsimUnG0053100 Rhododendron simsii HOM05D000126 ORTHO05D000085 1.2e-08 63.5 37 70.3
Rhsim08G0162600 Rhododendron simsii HOM05D000126 ORTHO05D000085 2.0e-08 62.8 37 73.0
Haze_07399 Corylus avellana HOM05D000126 ORTHO05D000085 3.4e-08 62.0 55 49.1
vmacro19331 Vaccinium macrocarpon HOM05D000126 ORTHO05D000085 9.9e-08 60.5 37 70.3
Hma1.2p1_0104F.1_g050470 Hydrangea macrophylla HOM05D000126 ORTHO05D000085 1.3e-07 60.1 42 61.9
EL10Ac5g10897 Beta vulgaris HOM05D000126 ORTHO05D000085 2.4e-06 55.8 41 58.5
Rhsim08G0162700 Rhododendron simsii HOM05D000126 ORTHO05D000085 2.4e-06 55.8 43 60.5
Sabra13G0043800 Salix brachista HOM05D000126 ORTHO05D000085 3.2e-06 55.5 37 59.5
Eucgr.K02902 Eucalyptus grandis HOM05D000126 ORTHO05D000085 4.2e-06 55.1 31 74.2
FAN08G2035 Fragaria x ananassa HOM05D000126 ORTHO05D000085 4.2e-06 55.1 31 71.0
Potri.013G047950 Populus trichocarpa HOM05D000126 ORTHO05D000085 4.2e-06 55.1 37 59.5
Potri.013G047900 Populus trichocarpa HOM05D000126 ORTHO05D000085 5.5e-06 54.7 37 56.8
Cfa019022 Carpinus fangiana HOM05D000126 ORTHO05D000085 7.1e-06 54.3 52 50.0
Cfa019023 Carpinus fangiana HOM05D000126 ORTHO05D000085 7.1e-06 54.3 52 50.0


User provided reference genes

Program Settings