Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28075 Davidia involucrata HOM05D009738 ORTHO05D011821 1.4e-62 242.7 115 100.0
Dinv16230 Davidia involucrata HOM05D009738 ORTHO05D011821 1.0e-52 209.9 107 92.5
Dinv41014 Davidia involucrata HOM05D001668 ORTHO05D001693 1.3e-52 209.5 103 95.1
Hma1.2p1_1287F.1_g273260 Hydrangea macrophylla HOM05D009738 ORTHO05D011821 7.1e-30 134.0 108 60.2
vmacro07382 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 9.3e-30 133.7 120 54.2
Dinv40604 Davidia involucrata HOM05D009738 ORTHO05D011821 1.8e-28 129.4 107 57.9
Dinv19453 Davidia involucrata HOM05D009738 ORTHO05D011821 1.1e-25 120.2 87 65.5
vmacro04017 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 1.4e-25 119.8 103 56.3
Dinv32094 Davidia involucrata HOM05D009738 ORTHO05D011821 1.8e-25 119.4 87 62.1
Dinv10885 Davidia involucrata HOM05D009738 ORTHO05D011821 8.4e-23 110.5 87 58.6
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 1.1e-22 110.2 103 52.4
Dinv20849 Davidia involucrata HOM05D009738 ORTHO05D011821 3.5e-21 105.1 50 94.0
Dinv38656 Davidia involucrata HOM05D009738 ORTHO05D011821 4.6e-21 104.8 107 56.1
Dinv23708 Davidia involucrata HOM05D009738 ORTHO05D011821 1.1e-19 100.1 87 54.0
RhsimUnG0078100 Rhododendron simsii HOM05D009738 ORTHO05D011821 2.8e-18 95.5 102 44.1
Rhsim03G0079000 Rhododendron simsii HOM05D009738 ORTHO05D011821 1.6e-13 79.7 66 56.1
Dinv31581 Davidia involucrata HOM05D009738 ORTHO05D011821 6.9e-09 64.3 50 62.0
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-08 63.5 94 36.2
TPR.G23664 Trifolium pratense HOM05D000589 ORTHO05D000401 2.0e-08 62.8 79 34.2
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 3.4e-08 62.0 109 29.4
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 5.9e-08 61.2 103 32.0
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.7e-08 60.8 94 35.1
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.7e-08 60.8 94 35.1
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.7e-08 60.8 94 35.1
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.0e-07 60.5 77 37.7
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 1.3e-07 60.1 87 28.7
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 1.3e-07 60.1 87 28.7
Medtr7g088160 Medicago truncatula HOM05D002397 ORTHO05D000401 1.7e-07 59.7 91 31.9
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 1.7e-07 59.7 109 28.4
Rhsim13G0070800 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.7e-07 59.7 78 34.6
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.2e-07 59.3 94 35.1
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 2.9e-07 58.9 102 34.3
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 3.8e-07 58.5 103 31.1
Rhsim03G0149900 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.8e-07 58.5 111 31.5
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 5.0e-07 58.2 103 32.0
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 6.5e-07 57.8 78 34.6
Aqoxy1G01456 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 8.5e-07 57.4 104 31.7
CiPaw.15G050900 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.5e-07 57.4 107 32.7
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 8.5e-07 57.4 102 30.4
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 8.5e-07 57.4 63 36.5
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-06 57.0 97 33.0
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-06 56.6 97 32.0
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-06 56.6 63 39.7
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-06 56.6 97 32.0
TWI23G0178 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.4e-06 56.6 74 37.8
TWI56G0559 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.4e-06 56.6 74 37.8
TWI56G0638 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.4e-06 56.6 74 37.8
TWI74G1447 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.4e-06 56.6 74 37.8
PSO591G0033 Papaver somniferum HOM05D008413 ORTHO05D000401 1.9e-06 56.2 78 34.6
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 2.5e-06 55.8 104 30.8
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 2.5e-06 55.8 63 36.5
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.5e-06 55.8 105 27.6
BolC2t09098H Brassica oleracea HOM05D000589 ORTHO05D000401 3.2e-06 55.5 90 31.1
CiPaw.01G092600 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.2e-06 55.5 78 35.9
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.2e-06 55.1 76 31.6
CiPaw.14G040600 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.2e-06 55.1 92 33.7
TWI38G0936 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.2e-06 55.1 99 28.3
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 5.5e-06 54.7 111 30.6
CSS0014176 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D010219 7.2e-06 54.3 63 34.9
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 7.2e-06 54.3 104 33.7
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.2e-06 54.3 101 29.7
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 9.4e-06 53.9 62 35.5
Medtr0867s0010 Medicago truncatula HOM05D001576 ORTHO05D000401 9.4e-06 53.9 103 31.1


User provided reference genes

Program Settings