Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 1.9e-229 798.9 416 100.0
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.5e-167 592.0 413 77.7
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 3.5e-159 565.5 413 72.6
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 7.7e-159 564.3 392 77.6
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.5e-154 550.1 427 69.6
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 5.7e-154 548.1 416 70.7
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 6.3e-153 544.7 415 70.8
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 8.3e-153 544.3 380 72.4
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 5.4e-152 541.6 479 63.3
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 1.0e-150 537.3 409 71.6
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 8.6e-150 534.3 380 72.1
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.1e-149 533.9 409 72.1
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 2.5e-149 532.7 415 67.7
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 7.3e-149 531.2 316 82.3
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 1.6e-148 530.0 425 68.2
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 8.0e-148 527.7 413 69.0
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.8e-147 526.6 308 84.7
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 6.8e-147 524.6 411 66.9
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 2.2e-145 519.6 421 68.6
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 2.4e-144 516.2 409 65.3
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.6e-143 513.5 413 64.2
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 1.0e-142 510.8 315 80.6
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.0e-142 510.8 300 82.7
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.9e-141 506.5 306 82.0
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 2.5e-141 506.1 307 79.2
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 9.5e-141 504.2 416 67.3
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 6.2e-140 501.5 474 60.8
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 4.9e-137 491.9 416 64.7
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 8.3e-137 491.1 408 64.7
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.4e-136 489.6 416 64.2
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 4.1e-136 488.8 436 59.2
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 4.1e-136 488.8 436 62.2
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 7.0e-136 488.0 321 75.1
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 6.0e-135 485.0 326 73.6
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 6.0e-135 485.0 418 60.8
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 7.8e-135 484.6 402 63.7
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.3e-134 483.8 409 63.3
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 1.3e-134 483.8 419 67.3
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 1.7e-134 483.4 306 76.5
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.7e-134 483.4 343 68.5
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 3.9e-134 482.3 292 81.5
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 3.9e-134 482.3 435 58.4
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 8.6e-134 481.1 398 64.8
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.1e-133 480.7 314 73.9
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.5e-133 480.3 409 62.1
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.9e-133 479.9 412 61.2
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 3.3e-133 479.2 303 76.2
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 9.5e-133 477.6 306 76.8
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.6e-132 476.9 298 75.5
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 3.6e-132 475.7 401 61.8
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 3.6e-132 475.7 403 66.3
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.2e-132 474.9 300 79.3
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 8.1e-132 474.6 330 71.5
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 4.0e-131 472.2 416 62.5
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.8e-131 471.5 309 77.0
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.9e-131 471.1 417 59.5
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.0e-130 469.9 421 58.9
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 2.0e-130 469.9 321 72.6
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 3.4e-130 469.2 312 75.0
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 9.8e-130 467.6 429 60.8
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.7e-129 466.8 315 75.2
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 6.4e-129 464.9 303 74.9
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.4e-128 463.0 416 59.4
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 4.1e-128 462.2 322 69.6
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 7.1e-128 461.5 290 79.7
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.1e-127 459.9 315 71.7
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 6.0e-127 458.4 352 69.9
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 7.8e-127 458.0 271 82.7
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 1.0e-126 457.6 391 60.9
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 1.3e-126 457.2 422 60.0
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.3e-126 457.2 285 77.9
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.3e-126 457.2 352 69.6
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 1.7e-126 456.8 306 73.2
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.7e-126 456.8 317 72.9
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 8.6e-126 454.5 312 75.3
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-125 454.1 317 72.6
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 9.5e-125 451.1 408 59.6
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 6.2e-124 448.4 473 57.9
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.4e-123 447.2 386 61.4
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 3.4e-122 442.6 311 70.7
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 5.4e-120 435.3 330 66.4
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 1.0e-118 431.0 297 69.4
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 2.3e-118 429.9 301 69.8
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.9e-117 426.8 389 59.1
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 8.1e-116 421.4 257 77.0
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 6.9e-115 418.3 302 65.6
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.5e-114 417.2 305 66.9
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 5.8e-114 415.2 423 54.8
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 3.2e-112 409.5 523 47.8
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.9e-110 402.5 244 78.3
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.9e-109 400.2 261 72.4
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 3.3e-109 399.4 298 66.4
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.8e-107 393.7 294 65.0
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 4.0e-107 392.5 449 50.1
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 1.5e-106 390.6 441 57.6
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.5e-106 389.0 294 68.7
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 2.2e-105 386.7 256 73.4
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 7.9e-87 325.1 237 70.5
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.9e-80 303.9 284 59.9
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.5e-80 303.5 302 57.0
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 4.2e-80 302.8 210 70.5
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 9.3e-80 301.6 182 76.9
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 5.5e-72 275.8 236 59.7
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 6.1e-71 272.3 257 55.6
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 8.8e-70 268.5 283 46.6
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 5.3e-67 259.2 283 54.8
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-65 254.6 269 58.4
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 1.6e-58 231.1 175 62.9
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 6.7e-54 215.7 133 75.2
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 2.0e-53 214.2 203 56.7
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 4.4e-53 213.0 185 56.8
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.4e-51 207.2 251 45.4
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 2.0e-50 204.1 287 40.8
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 2.3e-41 174.1 171 55.6
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.0e-37 161.0 179 49.2
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 3.4e-37 160.2 111 67.6
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 5.7e-37 159.5 163 49.7
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.7e-36 157.9 192 49.5
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 9.5e-32 142.1 196 43.4
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 1.4e-30 138.3 214 50.0
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 3.2e-27 127.1 192 42.7
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 9.2e-27 125.6 78 79.5
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.9e-24 117.9 71 70.4
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 4.3e-24 116.7 132 48.5
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 4.4e-21 106.7 180 39.4
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 7.5e-21 105.9 312 28.8
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 7.5e-21 105.9 107 55.1
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 2.2e-20 104.4 62 83.9
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 8.3e-20 102.4 215 34.4
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 4.1e-19 100.1 91 50.5
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 6.0e-18 96.3 307 27.7
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 5.0e-17 93.2 59 76.3
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 6.6e-17 92.8 175 32.0
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 8.6e-17 92.4 48 89.6
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.5e-16 91.7 53 77.4
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 9.5e-16 89.0 58 70.7
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 1.2e-15 88.6 53 77.4
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 9.9e-13 79.0 297 24.9
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.7e-12 78.2 244 27.0
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 4.9e-12 76.6 297 24.6
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 6.4e-12 76.3 59 64.4
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 5.4e-11 73.2 62 48.4
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 7.1e-11 72.8 311 25.4
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 6.0e-10 69.7 254 25.6
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.3e-09 68.6 257 24.9
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 1.1e-06 58.9 187 24.1


User provided reference genes

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