Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 3.3e-102 375.2 208 100.0
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.7e-51 206.1 163 77.3
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.3e-50 203.0 176 72.7
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 6.6e-50 201.4 184 66.8
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 1.9e-49 199.9 167 73.1
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.5e-49 199.5 167 69.5
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 7.3e-49 198.0 166 68.1
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 4.7e-48 195.3 177 71.2
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 9.8e-46 187.6 163 71.2
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.1e-44 184.1 165 68.5
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 1.1e-44 184.1 165 68.5
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 3.2e-44 182.6 164 67.7
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.6e-43 180.3 164 68.9
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 7.8e-43 177.9 164 65.9
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.3e-42 177.2 176 66.5
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 2.3e-42 176.4 179 61.5
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 3.0e-42 176.0 167 66.5
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 8.6e-42 174.5 183 60.1
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 2.5e-41 172.9 155 66.5
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 2.1e-40 169.9 164 66.5
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 2.3e-39 166.4 158 65.2
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 8.9e-39 164.5 129 77.5
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.2e-38 164.1 165 63.0
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 1.5e-38 163.7 158 61.4
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.6e-38 162.9 146 71.9
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 2.6e-38 162.9 134 74.6
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.7e-37 160.2 166 62.7
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 2.9e-37 159.5 158 63.9
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 1.9e-36 156.8 163 62.0
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.9e-36 156.8 163 62.0
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.9e-36 156.8 163 62.0
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.9e-36 156.8 163 62.0
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 5.4e-36 155.2 149 66.4
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 9.2e-36 154.5 163 64.4
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 9.2e-36 154.5 163 60.7
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.3e-34 150.6 128 74.2
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.3e-34 149.8 151 64.9
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 3.9e-34 149.1 164 60.4
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 5.1e-34 148.7 160 61.9
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 8.6e-34 147.9 159 60.4
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.1e-33 147.5 136 71.3
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 1.5e-33 147.1 156 62.8
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 1.9e-33 146.7 154 64.9
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.5e-33 146.4 153 64.1
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 3.3e-33 146.0 158 60.8
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 2.8e-32 142.9 165 57.0
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 2.8e-32 142.9 158 61.4
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 6.2e-32 141.7 153 62.7
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 8.1e-32 141.4 159 60.4
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 8.1e-32 141.4 150 62.7
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 8.1e-32 141.4 161 57.8
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 1.1e-31 141.0 153 64.1
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 1.1e-31 141.0 157 61.1
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 1.4e-31 140.6 163 58.3
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 1.8e-31 140.2 145 66.2
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 1.8e-31 140.2 156 58.3
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.4e-31 139.8 162 57.4
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 3.1e-31 139.4 161 58.4
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 3.1e-31 139.4 166 57.8
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 6.8e-31 138.3 159 58.5
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 8.9e-31 137.9 150 62.0
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.2e-30 137.5 150 64.0
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.0e-30 136.7 169 54.4
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 2.6e-30 136.3 193 51.8
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 3.4e-30 136.0 155 59.4
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 4.4e-30 135.6 159 58.5
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 4.4e-30 135.6 155 59.4
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 5.8e-30 135.2 151 62.9
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 5.8e-30 135.2 156 58.3
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 5.8e-30 135.2 168 55.4
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 9.9e-30 134.4 151 62.3
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.3e-29 134.0 152 60.5
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.7e-29 133.7 146 63.7
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.7e-29 133.7 153 62.7
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 4.9e-29 132.1 155 57.4
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 6.4e-29 131.7 150 62.0
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 8.4e-29 131.3 178 50.6
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.1e-28 131.0 153 57.5
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 1.9e-28 130.2 159 56.0
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 5.4e-28 128.6 150 57.3
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.6e-27 127.1 110 78.2
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.6e-27 127.1 129 66.7
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 2.1e-27 126.7 129 66.7
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 2.1e-27 126.7 129 66.7
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 2.7e-27 126.3 164 56.1
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 3.5e-27 125.9 168 54.8
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 6.0e-27 125.2 149 56.4
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 3.0e-26 122.9 151 57.0
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 1.9e-25 120.2 152 57.2
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 7.3e-25 118.2 163 55.8
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 7.6e-22 108.2 176 51.7
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.3e-21 107.5 156 55.8
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.4e-20 103.2 80 81.2
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 7.1e-20 101.7 115 64.3
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 2.1e-19 100.1 158 49.4
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 7.8e-19 98.2 112 54.5
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 3.9e-18 95.9 87 64.4
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.5e-17 93.2 109 58.7
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.4e-15 87.4 158 46.8
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.5e-14 84.0 110 55.5
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 5.8e-14 82.0 94 58.5
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 7.6e-14 81.6 82 70.7
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 4.2e-12 75.9 83 66.3
CDE02G3979 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 5.6e-09 65.5 109 40.4
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 9.6e-09 64.7 136 50.7


User provided reference genes

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