Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 3.2e-167 591.7 293 100.0
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 6.1e-126 454.5 273 82.1
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 4.4e-116 421.8 301 69.1
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 2.8e-115 419.1 299 70.6
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 4.8e-115 418.3 278 75.9
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 3.5e-113 412.1 293 68.3
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 1.7e-112 409.8 291 69.4
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 3.0e-109 399.1 292 66.8
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 7.5e-108 394.4 292 65.4
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 2.4e-106 389.4 295 66.8
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 4.1e-106 388.7 290 68.6
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 5.3e-106 388.3 292 64.4
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 5.3e-106 388.3 292 63.7
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 9.1e-106 387.5 293 66.2
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 3.5e-105 385.6 293 65.9
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 1.0e-104 384.0 285 64.2
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.2e-104 382.9 314 60.8
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 2.2e-104 382.9 314 60.8
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 6.5e-104 381.3 282 66.7
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 1.5e-103 380.2 292 63.7
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 3.2e-103 379.0 378 54.5
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 5.5e-103 378.3 292 62.7
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 7.2e-103 377.9 280 65.4
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 7.2e-103 377.9 288 63.5
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 9.4e-103 377.5 280 65.4
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.2e-102 377.1 282 66.3
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 3.6e-102 375.6 280 65.0
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 6.1e-102 374.8 227 75.3
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 8.8e-101 370.9 292 62.3
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 2.6e-100 369.4 284 65.1
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 1.3e-99 367.1 285 64.2
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.8e-99 365.9 285 63.9
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 8.3e-99 364.4 292 61.0
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 1.1e-98 364.0 292 62.3
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 2.4e-98 362.8 292 61.3
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 3.1e-98 362.5 298 60.1
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 3.1e-98 362.5 294 62.2
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 7.0e-98 361.3 295 61.4
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 9.1e-98 360.9 300 60.3
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 4.5e-97 358.6 284 63.0
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 5.9e-97 358.2 293 60.8
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 5.9e-97 358.2 284 63.0
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 3.8e-96 355.5 290 60.3
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 1.1e-95 354.0 250 68.4
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 1.5e-95 353.6 290 60.7
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 1.9e-95 353.2 240 72.1
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 9.5e-95 350.9 287 60.6
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 1.6e-94 350.1 296 61.1
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 1.4e-93 347.1 285 60.4
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 2.3e-93 346.3 294 59.2
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 5.2e-93 345.1 290 57.2
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 5.2e-93 345.1 284 60.6
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 1.5e-92 343.6 278 60.8
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 1.5e-92 343.6 278 60.8
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 2.0e-92 343.2 287 58.5
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 2.2e-91 339.7 288 60.1
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 1.2e-89 334.0 293 59.7
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 3.5e-89 332.4 298 59.1
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 7.8e-89 331.3 247 65.2
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 2.9e-88 329.3 285 57.9
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 2.9e-88 329.3 280 57.5
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 5.6e-87 325.1 289 55.7
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 7.3e-87 324.7 291 55.3
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 9.5e-87 324.3 289 55.4
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 1.2e-86 323.9 293 55.3
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 4.7e-86 322.0 301 56.1
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 1.4e-85 320.5 232 66.8
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 1.4e-85 320.5 294 55.4
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 1.8e-85 320.1 293 55.3
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 1.8e-85 320.1 195 81.0
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 2.3e-85 319.7 289 55.7
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 4.0e-85 318.9 262 62.6
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 6.8e-85 318.2 302 53.6
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 6.8e-85 318.2 302 53.6
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 8.9e-85 317.8 291 56.0
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 3.4e-84 315.8 307 52.4
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 4.4e-84 315.5 301 53.2
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 4.4e-84 315.5 301 53.2
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 5.8e-84 315.1 289 55.0
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 7.5e-84 314.7 292 55.5
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 3.7e-83 312.4 299 53.8
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 8.3e-83 311.2 306 52.9
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 1.4e-82 310.5 321 51.7
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 2.4e-82 309.7 287 55.1
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 3.2e-82 309.3 296 56.1
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 5.4e-82 308.5 299 53.5
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 1.6e-81 307.0 292 52.7
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 6.0e-81 305.1 293 54.6
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 1.2e-76 290.8 271 56.5
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 3.7e-75 285.8 213 68.5
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 4.9e-75 285.4 231 60.2
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 4.1e-74 282.3 312 49.4
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 7.0e-74 281.6 267 56.2
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 1.2e-73 280.8 195 69.7
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 1.0e-72 277.7 296 52.7
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 2.3e-72 276.6 388 41.5
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 9.5e-71 271.2 289 49.8
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 1.1e-69 267.7 275 52.0
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 4.0e-69 265.8 218 60.1
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 5.8e-68 261.9 216 59.3
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 7.5e-68 261.5 180 69.4
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 6.4e-67 258.5 265 51.3
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 4.1e-66 255.8 245 53.9
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 7.1e-66 255.0 191 65.4
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 4.6e-65 252.3 220 58.2
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 1.7e-64 250.4 236 53.4
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 1.5e-63 247.3 196 65.8
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 2.8e-62 243.0 293 48.1
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 6.2e-62 241.9 275 47.3
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 6.8e-61 238.4 286 45.8
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 4.9e-59 232.3 293 46.8
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 5.1e-56 222.2 177 58.8
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 1.2e-52 211.1 268 42.5
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 1.4e-50 204.1 173 58.4
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 1.5e-44 184.1 182 51.1
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 1.2e-41 174.5 178 48.9
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 8.1e-38 161.8 143 59.4
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 2.9e-35 153.3 185 43.8
Haze_08067 Corylus avellana HOM05D005964 ORTHO05D007242 2.8e-30 136.7 108 62.0
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 2.2e-27 127.1 82 65.9
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 1.6e-25 120.9 227 37.0
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 3.7e-22 109.8 281 29.5
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 8.2e-22 108.6 160 45.0
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 1.7e-19 100.9 110 41.8
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 5.3e-13 79.3 44 81.8
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 5.9e-12 75.9 122 36.9
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 2.5e-10 70.5 50 60.0
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 6.1e-09 65.9 40 62.5
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 1.8e-08 64.3 173 29.5
Haze_17138 Corylus avellana HOM05D000064 ORTHO05D007242 2.3e-08 63.9 84 47.6


User provided reference genes

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