Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 4.8e-83 311.2 169 100.0
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 2.3e-24 116.3 107 60.7
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.4e-21 107.1 107 58.9
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 6.8e-21 104.8 150 44.0
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 5.8e-20 101.7 105 57.1
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 7.0e-18 94.7 103 57.3
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 2.1e-17 93.2 103 54.4
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 2.7e-17 92.8 173 37.0
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 3.9e-16 89.0 105 52.4
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 8.6e-16 87.8 109 50.5
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 8.6e-16 87.8 173 36.4
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 8.6e-16 87.8 103 51.5
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 1.1e-15 87.4 102 52.0
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 3.3e-15 85.9 103 54.4
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 7.3e-15 84.7 101 51.5
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.2e-14 84.0 105 50.5
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.6e-14 83.6 106 51.9
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 1.8e-13 80.1 105 51.4
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 2.3e-13 79.7 105 46.7
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 2.3e-13 79.7 125 45.6
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 5.2e-13 78.6 104 54.8
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 6.8e-13 78.2 105 50.5
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 6.8e-13 78.2 106 50.0
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 6.8e-13 78.2 102 50.0
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 1.5e-12 77.0 106 48.1
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.4e-12 75.9 102 50.0
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 2.9e-11 72.8 102 50.0
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 3.7e-11 72.4 97 51.5
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 8.3e-11 71.2 99 49.5
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 2.4e-10 69.7 106 47.2
COL.COLO4_12070 Corchorus olitorius HOM05D006475 ORTHO05D007969 3.2e-10 69.3 173 33.5
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 5.4e-10 68.6 104 44.2
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 7.1e-10 68.2 106 47.2
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 9.2e-10 67.8 104 42.3
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 1.6e-09 67.0 106 44.3
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.6e-09 67.0 105 47.6
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 2.1e-09 66.6 99 43.4
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 4.6e-09 65.5 103 48.5
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 7.8e-09 64.7 104 44.2
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 7.8e-09 64.7 97 50.5
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.0e-08 64.3 102 49.0
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 1.3e-08 63.9 112 39.3
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.3e-08 63.9 103 47.6
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.7e-08 63.5 101 48.5
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 1.7e-08 63.5 107 43.0
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 3.0e-08 62.8 98 49.0
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 3.9e-08 62.4 112 37.5
CDE02G3782 Ceratophyllum demersum HOM05D054802 ORTHO05D007969 8.6e-08 61.2 112 38.4
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.9e-07 60.1 102 47.1
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 1.9e-07 60.1 105 44.8
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 3.3e-07 59.3 109 39.4
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 3.3e-07 59.3 103 44.7
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 4.7e-06 55.5 78 46.2


User provided reference genes

Program Settings