Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27999 Davidia involucrata HOM05D000123 ORTHO05D037916 1.5e-45 186.8 192 100.0
Hma1.2p1_0544F.1_g175700 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 1.3e-12 77.4 102 49.0
Potri.006G226800 Populus trichocarpa HOM05D000123 ORTHO05D000064 3.8e-12 75.9 125 45.6
QL02p000947 Quercus lobata HOM05D000123 ORTHO05D000064 8.6e-12 74.7 124 42.7
Thecc.09G056300 Theobroma cacao HOM05D000123 ORTHO05D000064 1.1e-11 74.3 129 42.6
CSS0014079 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 2.5e-11 73.2 110 47.3
FvH4_2g31690 Fragaria vesca HOM05D000123 ORTHO05D000064 2.5e-11 73.2 122 42.6
Dinv22884 Davidia involucrata HOM05D000123 ORTHO05D000064 1.2e-10 70.9 99 50.5
FAN27G2195 Fragaria x ananassa HOM05D000123 ORTHO05D000064 2.8e-10 69.7 122 41.0
FAN15G2073 Fragaria x ananassa HOM05D000123 ORTHO05D000064 6.1e-10 68.6 122 40.2
Prupe.1G410400 Prunus persica HOM05D000123 ORTHO05D000064 6.1e-10 68.6 120 41.7
RcHm_v2.0_Chr6g0311151 Rosa chinensis HOM05D000123 ORTHO05D000064 6.1e-10 68.6 122 41.8
Sabra06G0175500 Salix brachista HOM05D000123 ORTHO05D000064 6.1e-10 68.6 128 43.8
Haze_18164 Corylus avellana HOM05D000123 ORTHO05D000064 1.4e-09 67.4 119 41.2
QL11p022570 Quercus lobata HOM05D000123 ORTHO05D000064 1.4e-09 67.4 76 56.6
QL04p071344 Quercus lobata HOM05D003037 ORTHO05D000064 1.8e-09 67.0 76 56.6
Rhsim11G0043100 Rhododendron simsii HOM05D000123 ORTHO05D000064 4.0e-09 65.9 104 45.2
Duzib168G0691 Durio zibethinus HOM05D000123 ORTHO05D000064 5.2e-09 65.5 129 42.6
COL.COLO4_21078 Corchorus olitorius HOM05D000123 ORTHO05D000064 6.8e-09 65.1 119 39.5
Cfa017967 Carpinus fangiana HOM05D000123 ORTHO05D000064 1.2e-08 64.3 119 39.5
CiPaw.15G037500 Carya illinoinensis HOM05D000123 ORTHO05D000064 1.2e-08 64.3 80 53.8
Gorai.013G220400 Gossypium raimondii HOM05D000123 ORTHO05D000064 1.2e-08 64.3 123 40.7
Manes.03G049500 Manihot esculenta HOM05D000123 ORTHO05D000064 1.5e-08 63.9 125 37.6
Gohir.A13G187500 Gossypium hirsutum HOM05D000123 ORTHO05D000064 2.0e-08 63.5 123 39.8
Gohir.D13G194400 Gossypium hirsutum HOM05D000123 ORTHO05D000064 3.4e-08 62.8 123 39.8
MD08G1064100 Malus domestica HOM05D000123 ORTHO05D000064 4.4e-08 62.4 125 40.0
arahy.Tifrunner.gnm1.ann1.ABBA5Z Arachis hypogaea HOM05D000123 ORTHO05D000064 7.5e-08 61.6 107 38.3
AUR62009126 Chenopodium quinoa HOM05D000123 ORTHO05D000064 1.3e-07 60.8 118 43.2
Lj1g0019749 Lotus japonicus HOM05D000123 ORTHO05D000064 1.7e-07 60.5 81 44.4
vmacro00130 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 1.7e-07 60.5 118 44.9
AUR62039129 Chenopodium quinoa HOM05D000123 ORTHO05D000064 3.7e-07 59.3 118 42.4
Hma1.2p1_0544F.1_g175690 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 3.7e-07 59.3 103 42.7
Eucgr.C00664 Eucalyptus grandis HOM05D000123 ORTHO05D000064 6.4e-07 58.5 79 48.1
VMungo1309G3165 Vigna mungo HOM05D000123 ORTHO05D000064 1.1e-06 57.8 88 43.2
MD15G1057700 Malus domestica HOM05D000123 ORTHO05D000064 1.4e-06 57.4 82 45.1
Ah.10g034180 Amaranthus hybridus HOM05D000123 ORTHO05D000064 1.9e-06 57.0 102 39.2
Nitab4.5_0006852g0070 Nicotiana tabacum HOM05D000123 ORTHO05D000064 1.9e-06 57.0 77 51.9
Ca_15824_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 2.4e-06 56.6 105 36.2
Ca_15858_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 2.4e-06 56.6 105 36.2
Glyma.04G052000 Glycine max HOM05D000123 ORTHO05D000064 2.4e-06 56.6 85 42.4
TAR624G0010 Trochodendron aralioides HOM05D000123 ORTHO05D000064 2.4e-06 56.6 76 47.4
Atru.chr7.1098 Acer truncatum HOM05D000123 ORTHO05D037916 3.2e-06 56.2 77 49.4
Eucgr.C03056 Eucalyptus grandis HOM05D000123 ORTHO05D000064 3.2e-06 56.2 112 40.2
TWI63G1398 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 5.4e-06 55.5 116 37.1
Lj8P532T10 Lonicera japonica HOM05D000123 ORTHO05D000064 7.0e-06 55.1 85 47.1
Sopen08g018510 Solanum pennellii HOM05D000123 ORTHO05D000064 7.0e-06 55.1 115 43.5
TAR383G0684 Trochodendron aralioides HOM05D000123 ORTHO05D000064 7.0e-06 55.1 80 48.8
CAN.G20.1 Capsicum annuum HOM05D000123 ORTHO05D000064 9.2e-06 54.7 96 41.7
Solyc08g062960.4 Solanum lycopersicum HOM05D000123 ORTHO05D000064 9.2e-06 54.7 116 42.2


User provided reference genes

Program Settings