Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 3.3e-147 525.0 261 100.0
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 9.6e-123 443.7 254 84.6
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.8e-122 442.2 255 85.5
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 6.8e-121 437.6 264 84.1
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.0e-120 436.0 264 83.7
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 7.6e-120 434.1 285 77.5
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 1.2e-117 426.8 256 81.2
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 3.5e-117 425.2 252 82.9
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 6.6e-116 421.0 247 84.2
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 1.1e-115 420.2 259 78.0
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 5.6e-115 417.9 259 78.4
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 9.6e-115 417.2 259 77.6
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 1.3e-114 416.8 283 73.9
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 6.2e-114 414.5 252 79.4
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 9.0e-113 410.6 256 81.6
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.5e-112 409.8 256 78.9
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 3.4e-112 408.7 247 80.6
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 3.4e-112 408.7 256 77.3
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 5.8e-112 407.9 253 77.9
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 9.9e-112 407.1 265 75.5
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 9.9e-112 407.1 254 76.4
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.3e-111 406.8 244 79.5
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 2.2e-111 406.0 254 75.6
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 2.2e-111 406.0 247 78.1
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 8.4e-111 404.1 260 76.2
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 1.1e-110 403.7 260 78.8
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.4e-110 403.3 258 75.6
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 2.4e-110 402.5 256 76.2
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 4.6e-109 398.3 256 77.0
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.0e-108 395.6 239 82.4
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 3.9e-108 395.2 256 75.4
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 1.9e-107 392.9 266 73.7
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 2.5e-107 392.5 246 77.6
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.3e-106 390.2 251 74.9
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 1.6e-106 389.8 243 76.5
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.6e-106 389.8 258 74.4
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 3.6e-106 388.7 257 75.9
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 1.1e-105 387.1 256 73.0
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 2.4e-105 386.0 248 76.6
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 3.1e-105 385.6 258 75.2
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 1.2e-104 383.6 261 72.0
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.0e-104 382.9 264 71.6
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 2.6e-104 382.5 257 75.1
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 3.4e-104 382.1 246 73.2
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.3e-103 380.2 261 72.4
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 2.9e-103 379.0 246 73.2
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 6.4e-103 377.9 246 73.2
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 1.1e-102 377.1 256 73.4
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.9e-102 376.3 259 69.5
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 5.5e-102 374.8 260 71.5
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 5.5e-102 374.8 262 68.7
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 7.1e-102 374.4 260 70.0
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 9.3e-102 374.0 256 69.1
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 1.6e-101 373.2 260 72.7
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 3.5e-101 372.1 265 70.6
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 6.0e-101 371.3 248 71.8
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.0e-101 371.3 257 72.8
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 7.9e-101 370.9 258 70.2
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 1.0e-100 370.5 258 70.2
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 1.3e-100 370.2 246 74.8
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 2.3e-100 369.4 242 71.9
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 8.7e-100 367.5 261 68.6
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.9e-99 366.3 256 72.3
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 4.3e-99 365.2 259 68.0
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 5.6e-99 364.8 283 67.5
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 7.4e-99 364.4 242 74.0
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 7.4e-99 364.4 262 65.3
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 9.6e-99 364.0 259 68.0
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 9.6e-99 364.0 266 67.7
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 9.6e-99 364.0 264 65.9
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 1.6e-98 363.2 260 70.8
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.6e-98 363.2 242 73.6
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.6e-98 363.2 262 65.6
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.8e-98 362.5 251 72.1
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 6.2e-98 361.3 256 68.8
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 1.4e-97 360.1 254 66.5
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 1.4e-97 360.1 254 66.5
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.4e-97 360.1 260 66.2
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 1.8e-97 359.8 247 69.6
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.1e-97 359.0 249 67.9
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 3.1e-97 359.0 250 69.6
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 4.0e-97 358.6 253 68.0
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 6.9e-97 357.8 249 67.9
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.5e-96 356.7 260 67.7
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 2.0e-96 356.3 254 66.1
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 3.4e-96 355.5 254 66.1
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 5.8e-96 354.8 254 66.5
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 1.0e-95 354.0 254 65.7
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 1.0e-95 354.0 254 66.1
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.7e-95 353.2 249 67.1
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 3.5e-93 345.5 246 68.3
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 8.7e-92 340.9 266 63.5
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.1e-89 332.4 223 74.4
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 3.1e-89 332.4 255 66.7
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 5.5e-86 321.6 253 62.8
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 5.7e-83 311.6 248 62.1
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 5.7e-83 311.6 252 60.3
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 6.9e-81 304.7 280 53.9
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 1.3e-79 300.4 172 84.3
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 2.2e-79 299.7 242 61.6
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 4.6e-77 292.0 257 58.8
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 4.6e-77 292.0 242 61.2
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 8.8e-76 287.7 257 57.6
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 6.3e-74 281.6 196 70.9
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.1e-73 280.8 274 52.2
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.4e-73 280.4 172 77.9
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 1.8e-73 280.0 172 79.7
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.2e-69 267.3 207 60.9
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.0e-68 264.2 254 52.8
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.3e-66 257.3 176 71.0
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 1.1e-65 254.2 172 70.3
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 3.0e-60 236.1 243 48.1
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 6.7e-60 235.0 152 72.4
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 2.0e-56 223.4 662 28.5
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.9e-54 216.9 157 68.2
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 8.0e-53 211.5 233 47.6
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 8.3e-50 201.4 128 77.3
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 2.4e-49 199.9 217 46.1
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 9.1e-49 198.0 153 69.9
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 4.2e-46 189.1 140 69.3
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.5e-46 188.7 144 68.8
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 2.6e-43 179.9 181 50.8
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 1.8e-41 173.7 109 73.4
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.6e-37 160.6 96 81.2
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 3.0e-36 156.4 123 57.7
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 2.7e-32 143.3 91 76.9
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 1.5e-30 137.5 106 62.3
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.8e-28 128.6 75 81.3
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 5.8e-27 125.6 127 50.4
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 7.5e-27 125.2 246 36.6
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 2.2e-26 123.6 98 64.3
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 2.2e-26 123.6 98 64.3
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 3.5e-24 116.3 90 61.1
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 8.1e-21 105.1 90 57.8
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 5.1e-15 85.9 247 28.7
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.8e-10 69.7 72 52.8
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.2e-09 66.6 72 51.4
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.2e-09 66.6 72 51.4


User provided reference genes

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