Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 7.9e-225 783.5 403 100.0
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 2.2e-94 350.1 252 75.8
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 4.7e-76 289.3 256 61.7
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 2.1e-68 263.8 252 58.3
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 4.8e-65 252.7 254 55.1
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 4.8e-65 252.7 258 55.4
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 8.2e-65 251.9 251 55.8
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 1.1e-64 251.5 256 53.9
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 4.5e-63 246.1 250 54.4
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 1.3e-62 244.6 259 54.8
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 1.3e-62 244.6 250 54.8
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 5.0e-62 242.7 250 54.4
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 1.1e-61 241.5 258 52.3
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 1.5e-61 241.1 256 53.9
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 1.9e-61 240.7 260 53.5
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 1.9e-61 240.7 251 55.4
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.9e-61 240.7 256 53.1
MSTRG.11672 Avicennia marina HOM05D004579 ORTHO05D005376 5.5e-61 239.2 257 53.3
COL.COLO4_21028 Corchorus olitorius HOM05D004579 ORTHO05D005376 7.2e-61 238.8 220 58.2
Rhsim07G0143600 Rhododendron simsii HOM05D004579 ORTHO05D005376 1.6e-60 237.7 270 50.4
GSVIVG01035344001 Vitis vinifera HOM05D004579 ORTHO05D005376 2.3e-59 233.8 168 70.2
Gohir.D05G045500 Gossypium hirsutum HOM05D004579 ORTHO05D005376 1.2e-58 231.5 251 53.8
Gorai.009G046700 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.2e-58 231.5 248 53.6
Manes.16G077900 Manihot esculenta HOM05D004579 ORTHO05D005376 3.3e-58 229.9 264 50.8
CAN.G1226.13 Capsicum annuum HOM05D004579 ORTHO05D005376 4.4e-58 229.6 253 52.2
Oeu037326.2 Olea europaea HOM05D004579 ORTHO05D005376 4.4e-58 229.6 276 50.0
TWI34G1837 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 5.7e-58 229.2 252 51.2
Duzib187G0056 Durio zibethinus HOM05D004579 ORTHO05D005376 1.7e-57 227.6 251 53.0
Cc08_g10350 Coffea canephora HOM05D004579 ORTHO05D005376 2.2e-57 227.3 245 51.4
Actinidia14703 Actinidia chinensis HOM05D004579 ORTHO05D005376 2.8e-57 226.9 229 55.9
MELO3C022510.2 Cucumis melo HOM05D004579 ORTHO05D005376 2.8e-57 226.9 250 49.6
CANSAT25G0619 Cannabis sativa HOM05D004579 ORTHO05D005376 3.7e-57 226.5 257 51.0
Nitab4.5_0000359g0090 Nicotiana tabacum HOM05D004579 ORTHO05D005376 1.8e-56 224.2 245 53.9
Peaxi162Scf00436g00719 Petunia axillaris HOM05D004579 ORTHO05D005376 1.8e-56 224.2 249 50.2
Potri.006G232800 Populus trichocarpa HOM05D004579 ORTHO05D005376 2.4e-56 223.8 267 49.4
Nitab4.5_0008290g0030 Nicotiana tabacum HOM05D004579 ORTHO05D005376 3.1e-56 223.4 245 53.9
Solyc04g080350.4 Solanum lycopersicum HOM05D004579 ORTHO05D005376 5.3e-56 222.6 247 53.0
Sopen04g033940 Solanum pennellii HOM05D004579 ORTHO05D005376 5.3e-56 222.6 250 52.4
PGSC0003DMG400005151 Solanum tuberosum HOM05D004579 ORTHO05D005376 5.3e-56 222.6 247 51.8
Gohir.A05G043900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 7.0e-56 222.2 272 49.6
TPR.G13109 Trifolium pratense HOM05D004579 ORTHO05D005376 7.0e-56 222.2 268 50.4
Nitab4.5_0006174g0020 Nicotiana tabacum HOM05D004579 ORTHO05D005376 9.1e-56 221.9 245 53.5
ClCG06G000280 Citrullus lanatus HOM05D004579 ORTHO05D005376 1.2e-55 221.5 242 50.8
Migut.A00154 Erythranthe guttata HOM05D004579 ORTHO05D005376 1.6e-55 221.1 252 49.6
HanXRQChr08g0226451 Helianthus annuus HOM05D004579 ORTHO05D005376 1.6e-55 221.1 272 48.9
HanXRQChr08g0226601 Helianthus annuus HOM05D004579 ORTHO05D005376 1.6e-55 221.1 272 48.9
Nn8g38954 Nelumbo nucifera HOM05D004579 ORTHO05D005376 2.0e-55 220.7 242 50.4
SalBow4G3199 Salvia bowleyana HOM05D004579 ORTHO05D005376 2.0e-55 220.7 252 50.8
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 2.7e-55 220.3 269 50.2
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 2.7e-55 220.3 245 49.8
Sabra06G0181300 Salix brachista HOM05D004579 ORTHO05D005376 2.7e-55 220.3 274 48.9
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 4.5e-55 219.5 312 43.9
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 7.7e-55 218.8 253 49.0
Lsat_1_v5_gn_6_7421 Lactuca sativa HOM05D004579 ORTHO05D005376 1.0e-54 218.4 256 48.0
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 2.2e-54 217.2 252 50.4
Lj1g0026801 Lotus japonicus HOM05D004579 ORTHO05D005376 2.9e-54 216.9 281 45.9
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 3.8e-54 216.5 252 50.0
TWI63G0708 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 3.8e-54 216.5 255 50.2
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 1.9e-53 214.2 252 49.6
SGA_v2.0_scaffold88G27218 Striga asiatica HOM05D004579 ORTHO05D005376 7.2e-53 212.2 242 49.2
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 9.4e-53 211.8 260 48.8
VMungo0647G1140 Vigna mungo HOM05D004579 ORTHO05D005376 9.4e-53 211.8 250 52.4
Lalb_Chr24g0399591 Lupinus albus HOM05D004579 ORTHO05D005376 2.7e-52 210.3 251 48.2
Sc09g0009680 Simmondsia chinensis HOM05D004579 ORTHO05D005376 4.7e-52 209.5 257 49.8
Glyma.14G092900 Glycine max HOM05D004579 ORTHO05D005376 1.0e-51 208.4 241 51.9
unitig_736.g22340 Utricularia gibba HOM05D004579 ORTHO05D005376 1.0e-51 208.4 258 45.7
Eucgr.C00634 Eucalyptus grandis HOM05D004579 ORTHO05D005376 1.8e-51 207.6 255 47.1
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.8e-51 207.6 202 56.9
CsaV3_6G006070 Cucumis sativus L. HOM05D004579 ORTHO05D005376 4.0e-51 206.5 250 48.8
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 1.2e-50 204.9 260 47.7
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea HOM05D004579 ORTHO05D005376 1.5e-50 204.5 257 46.7
FAN27G3258 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.5e-50 204.5 272 45.2
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea HOM05D004579 ORTHO05D005376 2.0e-50 204.1 257 46.7
Oeu018654.1 Olea europaea HOM05D004579 ORTHO05D005376 5.7e-50 202.6 171 60.2
Aqoxy7G00927 Aquilegia oxysepala HOM05D004579 ORTHO05D005376 1.3e-49 201.4 258 45.0
Lalb_Chr22g0355991 Lupinus albus HOM05D004579 ORTHO05D005376 1.3e-49 201.4 262 44.7
FAN20G3218 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.7e-49 201.1 259 46.3
Medtr1g016630 Medicago truncatula HOM05D004579 ORTHO05D005376 1.7e-49 201.1 257 44.7
FAN15G2153 Fragaria x ananassa HOM05D004579 ORTHO05D005376 2.8e-49 200.3 260 46.2
FAN24G0041 Fragaria x ananassa HOM05D004579 ORTHO05D005376 2.8e-49 200.3 251 46.2
HanXRQChr09g0251171 Helianthus annuus HOM05D004579 ORTHO05D005376 2.8e-49 200.3 232 50.0
EL10Ac2g03929 Beta vulgaris HOM05D004579 ORTHO05D005376 3.7e-49 199.9 255 46.7
Sed0005208 Sechium edule HOM05D004579 ORTHO05D005376 6.3e-49 199.1 242 46.7
FvH4_2g32180 Fragaria vesca HOM05D004579 ORTHO05D005376 8.3e-49 198.7 251 45.8
Lj5g0003794 Lotus japonicus HOM05D004579 ORTHO05D005376 1.1e-48 198.4 239 48.5
Sed0027918 Sechium edule HOM05D004579 ORTHO05D005376 1.1e-48 198.4 242 47.5
VMungo1309G2710 Vigna mungo HOM05D004579 ORTHO05D005376 1.8e-48 197.6 251 48.2
Hund03357 Selenicereus undatus HOM05D004579 ORTHO05D005376 2.4e-48 197.2 284 43.3
Ca_02416_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 5.4e-48 196.1 253 45.8
CSS0042880 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 2.0e-47 194.1 154 64.3
Dinv10654 Davidia involucrata HOM05D004579 ORTHO05D179753 3.5e-47 193.4 137 78.8
Ah.11g044630 Amaranthus hybridus HOM05D004579 ORTHO05D005376 5.9e-47 192.6 243 49.0
Psat6g019640 Pisum sativum HOM05D004579 ORTHO05D005376 1.0e-46 191.8 254 43.7
PSO210G6518 Papaver somniferum HOM05D004579 ORTHO05D005376 2.9e-46 190.3 271 43.9
ECA233G0431 Erigeron canadensis HOM05D004579 ORTHO05D005376 3.8e-46 189.9 261 44.4
Thhalv10021403m.g Eutrema salsugineum HOM05D004579 ORTHO05D005376 6.5e-46 189.1 238 46.6
BraA05t21726Z Brassica rapa HOM05D004579 ORTHO05D005376 1.1e-45 188.3 256 41.8
PSO210G6474 Papaver somniferum HOM05D004579 ORTHO05D005376 5.5e-45 186.0 270 43.0
A05p28470 Brassica napus HOM05D004579 ORTHO05D005376 7.2e-45 185.7 259 42.5
FAN24G1203 Fragaria x ananassa HOM05D004579 ORTHO05D005376 7.2e-45 185.7 243 46.9
PGR031G0410 Punica granatum HOM05D004579 ORTHO05D005376 1.6e-44 184.5 231 46.8
CDE02G1740 Ceratophyllum demersum HOM05D004579 ORTHO05D005376 8.0e-44 182.2 245 44.1
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 8.0e-44 182.2 228 48.2
BcaC05g28330 Brassica carinata HOM05D004579 ORTHO05D005376 2.3e-43 180.6 257 41.6
C05p43910 Brassica napus HOM05D004579 ORTHO05D005376 2.3e-43 180.6 257 41.6
BolC5t33107H Brassica oleracea HOM05D004579 ORTHO05D005376 2.3e-43 180.6 257 41.6
Carub.0003s2037 Capsella rubella HOM05D004579 ORTHO05D005376 2.3e-43 180.6 251 41.4
AUR62022041 Chenopodium quinoa HOM05D004579 ORTHO05D005376 3.0e-43 180.3 167 53.9
AT3G20430 Arabidopsis thaliana HOM05D004579 ORTHO05D005376 5.2e-43 179.5 253 41.9
Aa31LG8G7240 Aethionema arabicum HOM05D004579 ORTHO05D005376 2.0e-42 177.6 251 42.6
CARHR096140 Cardamine hirsuta HOM05D004579 ORTHO05D005376 3.4e-42 176.8 266 41.0
BcaB06g26108 Brassica carinata HOM05D004579 ORTHO05D005376 7.5e-42 175.6 256 41.4
MBI01_g16584_MAGBIO Magnolia biondii HOM05D004579 ORTHO05D005376 9.8e-42 175.3 265 41.1
Sp3g18440 Schrenkiella parvula HOM05D004579 ORTHO05D005376 2.2e-41 174.1 259 41.3
AL3G34150 Arabidopsis lyrata HOM05D004579 ORTHO05D005376 2.8e-41 173.7 249 40.6
Nn6g35393 Nelumbo nucifera HOM05D004579 ORTHO05D005376 1.1e-40 171.8 244 43.9
THA.LOC104811250 Tarenaya hassleriana HOM05D004579 ORTHO05D005376 1.4e-40 171.4 171 53.8
Zm00001eb356770 Zea mays HOM05D004579 ORTHO05D005376 3.1e-40 170.2 178 53.4
HPP92_014384 Vanilla planifolia HOM05D004579 ORTHO05D005376 5.4e-40 169.5 255 43.5
PSO017G1019 Papaver somniferum HOM05D004579 ORTHO05D005376 1.6e-39 167.9 161 53.4
Os01g0559200 Oryza sativa ssp. japonica HOM05D004579 ORTHO05D005376 1.7e-38 164.5 269 39.8
PGR142G1482 Punica granatum HOM05D004579 ORTHO05D005376 3.3e-37 160.2 236 41.1
vmacro00165 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 4.3e-37 159.8 255 39.6
ATR0789G072 Amborella trichopoda HOM05D004579 ORTHO05D005376 7.3e-37 159.1 254 40.9
Hund19474 Selenicereus undatus HOM05D004579 ORTHO05D005376 6.1e-36 156.0 368 32.3
Dinv19045 Davidia involucrata HOM05D004579 ORTHO05D178698 3.0e-35 153.7 127 70.1
MSTRG.25939 Avicennia marina HOM05D004579 ORTHO05D005376 2.6e-34 150.6 142 55.6
vmacro05280 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 1.6e-31 141.4 136 57.4
AUR62009186 Chenopodium quinoa HOM05D004579 ORTHO05D005376 2.3e-30 137.5 215 40.5
PSO063G4337 Papaver somniferum HOM05D004579 ORTHO05D005376 5.0e-30 136.3 212 39.2
TPR.G25353 Trifolium pratense HOM05D004579 ORTHO05D005376 1.1e-29 135.2 131 56.5
Cpa.g.sc84.21 Carica papaya HOM05D004579 ORTHO05D005376 1.2e-26 125.2 240 36.2
SEGI_10906 Sequoiadendron giganteum HOM05D004579 ORTHO05D005376 1.2e-26 125.2 304 33.2
Actinidia18195 Actinidia chinensis HOM05D004579 ORTHO05D005376 3.4e-26 123.6 133 50.4
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 6.4e-25 119.4 130 52.3
RcHm_v2.0_Chr6g0310501 Rosa chinensis HOM05D004579 ORTHO05D005376 2.4e-24 117.5 137 48.9
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis HOM05D004579 ORTHO05D005376 1.2e-20 105.1 204 33.8
PGSC0003DMG400032806 Solanum tuberosum HOM05D004579 ORTHO05D005376 1.6e-20 104.8 70 75.7
Phvul.001G033700 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 4.7e-20 103.2 60 76.7
Mapoly0091s0021 Marchantia polymorpha HOM05D004579 ORTHO05D005376 2.6e-18 97.4 155 38.7
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea HOM05D004579 ORTHO05D005376 3.4e-18 97.1 154 40.3
CBR_g36456 Chara braunii HOM05D004579 ORTHO05D005376 6.4e-17 92.8 152 37.5
RcHm_v2.0_Chr6g0310491 Rosa chinensis HOM05D004579 ORTHO05D005376 6.4e-17 92.8 125 42.4
Pp3c10_2240 Physcomitrium patens HOM05D004579 ORTHO05D005376 3.0e-14 84.0 121 38.8
TPR.G25355 Trifolium pratense HOM05D004579 ORTHO05D005376 3.3e-13 80.5 133 38.3
vmacro00163 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 2.1e-12 77.8 218 33.9
Rhsim11G0046800 Rhododendron simsii HOM05D033462 ORTHO05D005376 5.2e-11 73.2 112 42.9
Rhsim01G0128100 Rhododendron simsii HOM05D033462 ORTHO05D011520 5.8e-10 69.7 127 38.6
Actinidia18194 Actinidia chinensis HOM05D004579 ORTHO05D005376 9.9e-10 68.9 67 55.2
QL03p011519 Quercus lobata HOM05D004579 ORTHO05D005376 1.1e-08 65.5 54 59.3
QL03p011522 Quercus lobata HOM05D004579 ORTHO05D005376 1.1e-08 65.5 66 51.5
PSO017G0877 Papaver somniferum HOM05D004579 ORTHO05D005376 2.4e-08 64.3 47 59.6
PSO017G5975 Papaver somniferum HOM05D004579 ORTHO05D005376 2.4e-08 64.3 47 59.6
Rhsim01G0127300 Rhododendron simsii HOM05D033462 ORTHO05D005376 2.1e-07 61.2 82 45.1
Rhsim03G0111100 Rhododendron simsii HOM05D003586 ORTHO05D004036 1.7e-06 58.2 49 59.2
Medtr3g104160 Medicago truncatula HOM05D004579 ORTHO05D005376 5.1e-06 56.6 51 56.9


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