Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27912 Davidia involucrata HOM05D000029 ORTHO05D008509 5.8e-79 299.7 682 100.0
CiPaw.08G026500 Carya illinoinensis HOM05D000029 ORTHO05D008509 2.8e-25 121.3 100 61.0
Haze_21901 Corylus avellana HOM05D000029 ORTHO05D008509 1.2e-23 115.9 101 58.4
CSS0037445 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D008509 3.5e-23 114.4 101 74.3
QL12p041230 Quercus lobata HOM05D000029 ORTHO05D008509 3.5e-23 114.4 134 47.0
Duzib168G2391 Durio zibethinus HOM05D000029 ORTHO05D008509 1.0e-22 112.8 133 51.9
GSVIVG01035611001 Vitis vinifera HOM05D000029 ORTHO05D008509 1.3e-22 112.5 101 67.3
Thecc.09G046300 Theobroma cacao HOM05D000029 ORTHO05D008509 1.7e-22 112.1 101 59.4
CiPaw.07G203300 Carya illinoinensis HOM05D000029 ORTHO05D008509 2.2e-22 111.7 112 53.6
Rhsim02G0176500 Rhododendron simsii HOM05D000029 ORTHO05D008509 6.5e-22 110.2 133 42.9
RhsimUnG0061800 Rhododendron simsii HOM05D000029 ORTHO05D008509 6.5e-22 110.2 133 42.9
Potri.006G237400 Populus trichocarpa HOM05D000029 ORTHO05D008509 8.5e-22 109.8 130 49.2
Sabra06G0185600 Salix brachista HOM05D000029 ORTHO05D008509 8.5e-22 109.8 133 47.4
Prupe.1G447000 Prunus persica HOM05D000029 ORTHO05D008509 3.2e-21 107.8 104 56.7
Duzib187G1170 Durio zibethinus HOM05D000029 ORTHO05D008509 4.2e-21 107.5 103 55.3
Hma1.2p1_0049F.1_g028470 Hydrangea macrophylla HOM05D000029 ORTHO05D008509 2.7e-20 104.8 103 55.3
Sabra18G0044600 Salix brachista HOM05D000029 ORTHO05D008509 4.7e-20 104.0 101 53.5
Manes.16G074500 Manihot esculenta HOM05D000029 ORTHO05D008509 6.1e-20 103.6 100 51.0
RcHm_v2.0_Chr6g0306541 Rosa chinensis HOM05D000029 ORTHO05D008509 6.1e-20 103.6 104 51.9
TAR626G0882 Trochodendron aralioides HOM05D000029 ORTHO05D008832 1.4e-19 102.4 115 61.7
vmacro11053 Vaccinium macrocarpon HOM05D000029 ORTHO05D008509 1.4e-19 102.4 101 48.5
Gohir.D05G047700 Gossypium hirsutum HOM05D000029 ORTHO05D008509 1.8e-19 102.1 101 53.5
Gorai.009G049000 Gossypium raimondii HOM05D000029 ORTHO05D008509 1.8e-19 102.1 101 53.5
Potri.018G045500 Populus trichocarpa HOM05D000029 ORTHO05D008509 2.3e-19 101.7 101 52.5
MD08G1112700 Malus domestica HOM05D000029 ORTHO05D008509 3.0e-19 101.3 103 50.5
Gohir.A05G046000 Gossypium hirsutum HOM05D000029 ORTHO05D008509 8.8e-19 99.8 101 52.5
Ciclev10007358m.g Citrus clementina HOM05D000029 ORTHO05D008509 2.0e-18 98.6 131 45.8
Oeu015250.1 Olea europaea HOM05D000029 ORTHO05D008509 3.4e-18 97.8 119 48.7
Cc08_g09750 Coffea canephora HOM05D000029 ORTHO05D008509 4.4e-18 97.4 101 48.5
TAR383G0643 Trochodendron aralioides HOM05D000029 ORTHO05D008509 5.7e-18 97.1 101 64.4
Glyma.06G086800 Glycine max HOM05D000029 ORTHO05D008509 1.7e-17 95.5 136 41.2
MD15G1092100 Malus domestica HOM05D000029 ORTHO05D008509 2.8e-17 94.7 135 43.7
Manes.03G059300 Manihot esculenta HOM05D000029 ORTHO05D008509 2.8e-17 94.7 134 45.5
Actinidia26065 Actinidia chinensis HOM05D000029 ORTHO05D008509 3.7e-17 94.4 102 47.1
Atru.chr7.2076 Acer truncatum HOM05D000029 ORTHO05D008509 8.3e-17 93.2 103 50.5
FAN20G1185 Fragaria x ananassa HOM05D000029 ORTHO05D008509 8.3e-17 93.2 104 47.1
FAN27G1690 Fragaria x ananassa HOM05D000029 ORTHO05D008509 1.4e-16 92.4 104 46.2
TWI34G1754 Tripterygium wilfordii HOM05D000029 ORTHO05D008509 1.8e-16 92.0 103 49.5
Oeu023209.1 Olea europaea HOM05D000029 ORTHO05D008509 3.1e-16 91.3 101 49.5
MSTRG.11694 Avicennia marina HOM05D000029 ORTHO05D008509 4.1e-16 90.9 120 43.3
Gorai.001G026700 Gossypium raimondii HOM05D000029 ORTHO05D008509 4.1e-16 90.9 103 51.5
Nn6g35300 Nelumbo nucifera HOM05D000029 ORTHO05D008509 5.4e-16 90.5 103 63.1
PGR044G2164 Punica granatum HOM05D000029 ORTHO05D008509 1.2e-15 89.4 102 44.1
FvH4_2g35370 Fragaria vesca HOM05D000029 ORTHO05D008509 1.6e-15 89.0 104 45.2
Gohir.D07G025600 Gossypium hirsutum HOM05D000029 ORTHO05D008509 2.0e-15 88.6 103 50.5
Lj1g0013409 Lotus japonicus HOM05D000029 ORTHO05D008509 2.0e-15 88.6 102 49.0
CSS0046720 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D008509 3.5e-15 87.8 117 43.6
FAN15G1541 Fragaria x ananassa HOM05D000029 ORTHO05D008509 3.5e-15 87.8 104 46.2
Nitab4.5_0006460g0010 Nicotiana tabacum HOM05D000029 ORTHO05D008509 4.5e-15 87.4 101 53.5
COL.COLO4_20982 Corchorus olitorius HOM05D000029 ORTHO05D008509 5.9e-15 87.0 101 54.5
arahy.Tifrunner.gnm1.ann1.N0ZTM3 Arachis hypogaea HOM05D000029 ORTHO05D008509 1.3e-14 85.9 103 43.7
Nitab4.5_0006339g0010 Nicotiana tabacum HOM05D000029 ORTHO05D008509 2.9e-14 84.7 101 48.5
Gohir.A07G022261 Gossypium hirsutum HOM05D000029 ORTHO05D008509 5.0e-14 84.0 103 48.5
Nn8g39108 Nelumbo nucifera HOM05D000029 ORTHO05D008509 5.0e-14 84.0 103 43.7
arahy.Tifrunner.gnm1.ann1.K92LHN Arachis hypogaea HOM05D000029 ORTHO05D008509 6.6e-14 83.6 103 41.7
Eucgr.C02938 Eucalyptus grandis HOM05D000029 ORTHO05D008509 6.6e-14 83.6 101 43.6
Glyma.04G085200 Glycine max HOM05D000029 ORTHO05D008509 6.6e-14 83.6 102 42.2
Lj7A699T52 Lonicera japonica HOM05D000029 ORTHO05D008509 6.6e-14 83.6 103 44.7
Aqoxy7G01458 Aquilegia oxysepala HOM05D000029 ORTHO05D008509 1.5e-13 82.4 102 42.2
Ca_15583_v3 Cicer arietinum L. HOM05D000029 ORTHO05D008509 3.3e-13 81.3 136 36.8
Lj8C571G7 Lonicera japonica HOM05D000029 ORTHO05D008509 3.3e-13 81.3 56 69.6
CAN.G20.31 Capsicum annuum HOM05D000029 ORTHO05D008509 7.3e-13 80.1 99 49.5
Cpa.g.sc78.19 Carica papaya HOM05D000029 ORTHO05D008509 3.6e-12 77.8 133 37.6
TPR.G15101 Trifolium pratense HOM05D000029 ORTHO05D008509 3.6e-12 77.8 143 37.1
Aa31LG5G9870 Aethionema arabicum HOM05D000029 ORTHO05D008509 4.7e-12 77.4 103 41.7
Psat0s3655g0040 Pisum sativum HOM05D000029 ORTHO05D008509 4.7e-12 77.4 136 37.5
PGSC0003DMG400029146 Solanum tuberosum HOM05D000029 ORTHO05D008509 4.7e-12 77.4 122 41.8
TWI63G0396 Tripterygium wilfordii HOM05D000029 ORTHO05D008509 4.7e-12 77.4 104 44.2
Medtr3g109820 Medicago truncatula HOM05D000029 ORTHO05D008509 6.1e-12 77.0 141 38.3
PSO210G3622 Papaver somniferum HOM05D000029 ORTHO05D008509 1.0e-11 76.3 103 41.7
PSO210G5503 Papaver somniferum HOM05D000029 ORTHO05D008509 1.0e-11 76.3 103 41.7
Phvul.009G110600 Phaseolus vulgaris HOM05D000029 ORTHO05D008509 1.0e-11 76.3 106 38.7
Actinidia30282 Actinidia chinensis HOM05D000029 ORTHO05D008832 1.4e-11 75.9 56 62.5
Solyc08g066490.3 Solanum lycopersicum HOM05D000029 ORTHO05D008509 1.4e-11 75.9 100 47.0
Sopen08g020310 Solanum pennellii HOM05D000029 ORTHO05D008509 1.4e-11 75.9 100 47.0
BraA03t11920Z Brassica rapa HOM05D000029 ORTHO05D008509 3.0e-11 74.7 107 40.2
AUR62042445 Chenopodium quinoa HOM05D000029 ORTHO05D008509 3.0e-11 74.7 110 46.4
A03p27070 Brassica napus HOM05D000029 ORTHO05D008509 4.0e-11 74.3 121 36.4
SalBow4G3093 Salvia bowleyana HOM05D000029 ORTHO05D008509 4.0e-11 74.3 103 39.8
EL10Ac2g03999 Beta vulgaris HOM05D000029 ORTHO05D008509 6.8e-11 73.6 113 40.7
HanXRQChr04g0108781 Helianthus annuus HOM05D000029 ORTHO05D008509 6.8e-11 73.6 107 37.4
Peaxi162Scf00654g00310 Petunia axillaris HOM05D000029 ORTHO05D008509 6.8e-11 73.6 53 66.0
MBI04_g06587_MAGBIO Magnolia biondii HOM05D000633 ORTHO05D008509 1.2e-10 72.8 103 40.8
DCAR_007719 Daucus carota HOM05D000029 ORTHO05D008509 1.5e-10 72.4 102 41.2
BcaC01g04901 Brassica carinata HOM05D000416 ORTHO05D008509 2.6e-10 71.6 107 39.3
C03p32510 Brassica napus HOM05D000029 ORTHO05D008509 2.6e-10 71.6 107 39.3
Sed0025526 Sechium edule HOM05D000029 ORTHO05D008509 3.4e-10 71.2 102 39.2
Carub.0004s0558 Capsella rubella HOM05D000029 ORTHO05D008509 4.4e-10 70.9 107 39.3
Ah.10g034920 Amaranthus hybridus HOM05D000029 ORTHO05D008509 5.7e-10 70.5 128 44.5
BolC3t15590H Brassica oleracea HOM05D000029 ORTHO05D008509 5.7e-10 70.5 107 39.3
VMungo1309G1662 Vigna mungo HOM05D000029 ORTHO05D008509 9.8e-10 69.7 102 36.3
AT2G25790 Arabidopsis thaliana HOM05D000029 ORTHO05D008509 1.3e-09 69.3 107 39.3
Thhalv10001899m.g Eutrema salsugineum HOM05D000029 ORTHO05D008509 2.2e-09 68.6 107 40.2
BcaB01g03012 Brassica carinata HOM05D000029 ORTHO05D008509 2.9e-09 68.2 107 37.4
CANSAT25G2596 Cannabis sativa HOM05D000029 ORTHO05D008509 2.9e-09 68.2 124 35.5
Cfa012426 Carpinus fangiana HOM05D000008 ORTHO05D008509 3.7e-09 67.8 71 52.1
AUR62009261 Chenopodium quinoa HOM05D000029 ORTHO05D008509 3.7e-09 67.8 110 49.1
Lsat_1_v5_gn_1_45940 Lactuca sativa HOM05D000029 ORTHO05D008509 6.4e-09 67.0 103 35.0
AL4G17470 Arabidopsis lyrata HOM05D000029 ORTHO05D008509 8.3e-09 66.6 107 38.3
Sp4g05550 Schrenkiella parvula HOM05D000029 ORTHO05D008509 8.3e-09 66.6 108 38.0
SGA_v2.0_scaffold243G44282 Striga asiatica HOM05D000029 ORTHO05D008509 1.4e-08 65.9 68 47.1
Sc06g0000810 Simmondsia chinensis HOM05D000029 ORTHO05D008509 2.4e-08 65.1 108 40.7
CsaV3_3G048500 Cucumis sativus L. HOM05D000029 ORTHO05D008509 3.2e-08 64.7 137 34.3
HanXRQChr11g0352421 Helianthus annuus HOM05D000029 ORTHO05D008509 3.2e-08 64.7 59 52.5
MELO3C003469.2 Cucumis melo HOM05D000029 ORTHO05D008509 5.4e-08 63.9 141 34.8
Duzib213G0018 Durio zibethinus HOM05D000053 ORTHO05D000035 5.4e-08 63.9 56 58.9
Duzib213G0804 Durio zibethinus HOM05D000053 ORTHO05D029263 5.4e-08 63.9 56 58.9
Migut.A00195 Erythranthe guttata HOM05D000029 ORTHO05D008509 1.6e-07 62.4 45 64.4
ECA248G1998 Erigeron canadensis HOM05D000029 ORTHO05D008509 2.7e-07 61.6 103 34.0
Lalb_Chr11g0064541 Lupinus albus HOM05D000029 ORTHO05D008509 2.7e-07 61.6 60 51.7
Duzib213G0168 Durio zibethinus HOM05D000053 ORTHO05D000035 3.5e-07 61.2 52 59.6
THA.LOC104803754 Tarenaya hassleriana HOM05D000029 ORTHO05D008509 3.5e-07 61.2 143 29.4
Thecc.07G021700 Theobroma cacao HOM05D000053 ORTHO05D000035 4.6e-07 60.8 56 57.1
ClCG11G015100 Citrullus lanatus HOM05D000029 ORTHO05D008509 1.0e-06 59.7 137 32.8
CARHR115450 Cardamine hirsuta HOM05D000029 ORTHO05D008509 3.0e-06 58.2 57 43.9
Peaxi162Scf00111g00065 Petunia axillaris HOM05D000029 ORTHO05D002162 3.0e-06 58.2 56 44.6
Hund03389 Selenicereus undatus HOM05D000029 ORTHO05D008509 5.0e-06 57.4 100 49.0


User provided reference genes

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