Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.3e-169 599.7 315 100.0
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 9.1e-136 487.3 291 86.6
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.9e-133 479.6 291 85.9
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 8.8e-131 470.7 313 79.9
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 3.2e-125 452.2 292 81.8
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 9.4e-125 450.7 309 77.7
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 3.6e-124 448.7 292 80.5
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.8e-123 446.4 307 77.5
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 6.8e-123 444.5 293 78.5
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 5.7e-122 441.4 249 92.0
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 7.5e-122 441.0 316 74.7
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.2e-121 439.5 310 77.4
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.4e-120 436.8 293 78.5
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 2.4e-120 436.0 292 77.1
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 2.0e-119 433.0 295 75.6
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 3.5e-119 432.2 312 75.0
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 4.5e-119 431.8 293 77.8
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 7.7e-119 431.0 300 78.3
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.7e-118 429.9 295 77.3
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 2.3e-118 429.5 304 74.7
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 3.8e-118 428.7 293 77.5
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.5e-118 427.9 293 77.1
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.5e-117 426.8 290 78.3
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.5e-117 426.8 298 78.2
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.9e-117 426.4 292 76.7
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.2e-117 425.2 293 76.8
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 7.2e-117 424.5 286 79.7
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.2e-116 423.7 293 76.5
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 1.6e-116 423.3 290 76.6
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 2.8e-116 422.5 315 74.3
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 4.7e-116 421.8 313 73.5
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.0e-115 420.6 294 76.5
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.4e-115 420.2 260 81.5
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 2.3e-115 419.5 290 76.9
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 5.2e-115 418.3 295 75.3
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 5.2e-115 418.3 290 75.9
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 8.8e-115 417.5 314 73.2
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 2.0e-114 416.4 292 74.7
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 2.6e-114 416.0 283 77.0
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 4.4e-114 415.2 262 81.3
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 7.5e-114 414.5 291 74.9
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.3e-113 413.7 293 76.1
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 2.2e-113 412.9 311 73.0
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 6.3e-113 411.4 289 75.1
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 6.3e-113 411.4 295 74.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 8.3e-113 411.0 285 75.8
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 1.1e-112 410.6 291 75.6
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 2.4e-112 409.5 298 75.2
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.4e-112 409.5 288 73.6
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 3.1e-112 409.1 285 74.0
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 3.1e-112 409.1 293 74.1
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 4.1e-112 408.7 288 73.3
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 5.4e-112 408.3 285 75.8
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 7.0e-112 407.9 297 72.7
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 9.2e-112 407.5 290 75.2
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 9.2e-112 407.5 262 80.5
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.2e-111 407.1 302 70.5
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.2e-111 407.1 290 74.8
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.6e-111 406.8 260 78.1
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.7e-111 406.0 297 71.7
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 3.5e-111 405.6 283 74.9
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 4.5e-111 405.2 294 72.8
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 7.8e-111 404.4 328 68.3
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.7e-110 403.3 316 69.0
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 1.7e-110 403.3 236 88.1
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 3.8e-110 402.1 238 85.7
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 6.6e-110 401.4 293 74.4
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.9e-109 399.8 314 70.4
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 5.6e-109 398.3 281 74.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 7.3e-109 397.9 292 74.0
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.2e-108 397.1 250 81.6
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 1.6e-108 396.7 311 67.8
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 2.1e-108 396.4 289 73.7
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 6.1e-108 394.8 294 71.4
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 8.0e-108 394.4 285 74.0
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 1.8e-107 393.3 292 70.9
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.4e-106 389.0 314 69.1
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.7e-105 386.7 312 68.3
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 8.3e-105 384.4 334 65.9
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 8.3e-105 384.4 293 71.3
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.4e-104 383.6 295 71.5
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 3.2e-104 382.5 335 63.9
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 4.1e-104 382.1 284 70.8
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 7.0e-104 381.3 222 91.0
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 7.8e-103 377.9 259 72.2
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.2e-100 368.2 250 74.0
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.4e-98 362.5 266 70.7
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 9.8e-98 360.9 307 64.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 1.7e-97 360.1 302 63.6
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 5.4e-96 355.1 283 68.6
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.2e-95 354.0 221 81.0
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 1.6e-95 353.6 289 66.4
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 7.3e-93 344.7 235 74.5
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 5.2e-91 338.6 306 62.7
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 2.7e-87 326.2 216 74.1
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.4e-83 313.9 232 70.7
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 2.4e-83 313.2 226 75.7
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 7.8e-79 298.1 222 73.9
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.3e-78 297.4 218 71.1
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 8.7e-78 294.7 260 56.5
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 1.4e-75 287.3 260 55.8
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 4.2e-72 275.8 228 66.7
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 6.0e-71 271.9 299 48.8
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 9.9e-66 254.6 251 52.2
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.1e-64 251.1 263 48.3
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.4e-64 250.8 300 47.0
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 6.0e-63 245.4 249 53.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.5e-61 240.0 253 49.4
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.9e-54 216.1 129 84.5
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 2.5e-53 213.4 264 44.3
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.9e-45 187.2 249 43.0
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 5.3e-43 179.1 123 76.4
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 3.2e-40 169.9 246 38.2
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.3e-38 163.7 141 70.2
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 3.6e-31 139.8 324 38.0
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.0e-25 121.7 244 31.1
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 3.0e-22 110.2 259 32.4
Actinidia30278 Actinidia chinensis HOM05D005233 ORTHO05D006308 5.9e-10 69.3 102 47.1
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 4.2e-08 63.2 52 59.6
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 4.7e-07 59.7 32 93.8


User provided reference genes

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