Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 1.1e-145 520.0 265 100.0
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 3.1e-105 385.6 236 83.1
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 7.2e-102 374.4 237 79.3
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.6e-99 365.9 249 72.7
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.6e-99 365.9 249 72.7
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 5.7e-99 364.8 229 78.6
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 3.1e-97 359.0 236 77.1
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 3.4e-91 339.0 236 73.7
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 3.7e-90 335.5 236 72.0
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 4.9e-90 335.1 237 71.7
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 4.1e-89 332.0 226 71.7
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 5.4e-89 331.6 236 71.2
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 7.0e-89 331.3 240 69.2
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 3.5e-88 328.9 239 69.5
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 4.5e-88 328.6 230 73.0
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 2.9e-87 325.9 234 67.1
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 1.1e-86 323.9 236 69.1
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 4.3e-86 322.0 237 70.5
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 5.6e-86 321.6 236 70.8
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 7.3e-86 321.2 236 69.9
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 3.6e-85 318.9 236 66.9
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 3.6e-85 318.9 231 68.0
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 4.7e-85 318.5 239 71.5
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 6.1e-85 318.2 261 61.7
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 8.0e-85 317.8 223 72.2
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 1.0e-84 317.4 241 67.2
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 6.8e-84 314.7 240 71.2
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.5e-83 313.5 237 70.0
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 4.4e-83 312.0 226 69.9
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 4.4e-83 312.0 235 66.4
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 9.8e-83 310.8 233 67.0
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 1.1e-81 307.4 228 66.7
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 1.4e-81 307.0 237 65.4
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 1.9e-81 306.6 241 66.4
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 4.1e-81 305.4 242 65.7
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 9.2e-81 304.3 241 65.6
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 1.2e-80 303.9 239 66.1
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 1.6e-80 303.5 225 69.3
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.6e-80 303.5 224 66.5
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 7.8e-80 301.2 228 66.7
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 1.0e-79 300.8 241 66.8
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 1.3e-79 300.4 227 67.4
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 1.7e-79 300.1 241 66.8
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 1.7e-79 300.1 243 66.7
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 1.7e-79 300.1 241 63.9
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 6.6e-79 298.1 239 66.1
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 6.6e-79 298.1 241 64.3
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 1.5e-78 297.0 233 64.4
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 2.5e-78 296.2 232 65.5
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 5.6e-78 295.0 238 63.9
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 7.3e-78 294.7 231 65.8
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 6.2e-77 291.6 227 66.1
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 1.1e-76 290.8 236 64.4
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 2.3e-76 289.7 238 62.6
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.5e-75 287.0 241 63.5
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 2.0e-75 286.6 227 64.8
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.7e-74 283.5 210 70.5
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.9e-74 282.7 241 63.1
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 2.9e-74 282.7 242 59.9
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 8.3e-74 281.2 271 58.3
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 1.1e-73 280.8 236 62.3
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.1e-73 280.8 241 63.1
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 1.1e-73 280.8 239 60.3
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 3.2e-73 279.3 197 72.1
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 3.2e-73 279.3 244 61.5
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 5.4e-73 278.5 233 59.7
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 3.5e-72 275.8 242 61.2
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 1.0e-71 274.2 235 63.0
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.3e-71 273.9 236 63.1
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 5.1e-71 271.9 218 65.6
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 6.6e-71 271.6 239 61.1
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 8.6e-71 271.2 238 61.8
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 1.1e-70 270.8 241 60.2
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 1.5e-70 270.4 241 58.5
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 2.1e-69 266.5 240 58.3
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 4.7e-69 265.4 241 58.1
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 8.1e-69 264.6 241 57.7
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 8.1e-69 264.6 238 58.8
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 1.4e-68 263.8 241 57.3
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 1.8e-68 263.5 240 58.8
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 6.8e-68 261.5 239 56.5
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 1.2e-67 260.8 227 57.3
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 1.2e-67 260.8 239 55.2
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 1.2e-67 260.8 227 57.3
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 1.2e-67 260.8 241 55.2
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 1.2e-67 260.8 231 58.4
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 1.5e-67 260.4 237 57.8
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 2.0e-67 260.0 243 55.1
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 4.1e-65 252.3 240 57.5
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 4.1e-65 252.3 240 57.5
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 4.1e-65 252.3 320 48.4
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 8.6e-63 244.6 225 60.0
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 3.3e-62 242.7 240 56.7
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 9.9e-59 231.1 235 56.2
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 1.7e-58 230.3 233 56.7
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 3.8e-58 229.2 184 64.1
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 4.2e-57 225.7 171 65.5
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 1.2e-56 224.2 234 53.0
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 1.3e-53 214.2 171 62.6
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 1.4e-52 210.7 243 50.2
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 7.6e-43 178.3 142 64.8
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 4.3e-38 162.5 110 72.7
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 4.0e-36 156.0 129 61.2
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 6.9e-36 155.2 116 65.5
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 6.9e-36 155.2 116 65.5
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 1.3e-34 151.0 225 43.6
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 3.0e-31 139.8 462 29.9
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.6e-24 117.5 92 63.0
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.5e-24 116.3 89 68.5
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 9.7e-22 108.2 154 39.0
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.0e-18 98.2 102 49.0
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 1.3e-18 97.8 186 36.0
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 2.9e-18 96.7 62 75.8
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 2.1e-16 90.5 119 46.2
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 2.0e-14 84.0 208 27.9
FAN18G4502 Fragaria x ananassa HOM05D006609 ORTHO05D046171 2.1e-08 63.9 86 45.3
FvH4_5g31640 Fragaria vesca HOM05D006609 ORTHO05D046171 3.6e-08 63.2 61 54.1
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 7.9e-08 62.0 156 30.1
arahy.Tifrunner.gnm1.ann1.WH0W9H Arachis hypogaea HOM05D006609 ORTHO05D008551 5.1e-07 59.3 48 60.4


User provided reference genes

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