Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 1.6e-264 915.6 473 100.0
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.2e-177 625.2 483 72.3
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 5.9e-163 578.2 489 62.6
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.4e-159 567.0 477 62.7
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.3e-159 566.2 480 62.9
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.0e-159 565.8 474 64.3
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.7e-157 560.1 434 67.7
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.4e-156 557.0 483 61.9
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 7.0e-156 554.7 487 64.1
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.2e-155 553.9 479 62.0
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.6e-155 553.5 365 74.2
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 7.7e-155 551.2 433 66.5
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 3.8e-154 548.9 456 63.8
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 8.0e-152 541.2 451 63.6
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.0e-151 540.8 494 59.1
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 3.0e-151 539.3 434 65.7
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.3e-149 531.6 391 68.8
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 9.1e-148 527.7 364 71.4
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 2.0e-147 526.6 364 72.0
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 5.9e-147 525.0 383 69.5
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 5.9e-147 525.0 486 61.9
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 7.7e-147 524.6 451 65.0
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 1.0e-146 524.2 362 70.7
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 1.7e-146 523.5 479 58.2
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.2e-146 523.1 405 66.2
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.4e-145 517.7 421 63.7
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 2.1e-144 516.5 365 70.4
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 6.1e-144 515.0 353 73.1
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 4.0e-143 512.3 369 68.0
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 8.8e-143 511.1 356 70.8
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 8.8e-143 511.1 356 70.8
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 4.4e-142 508.8 409 65.0
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 4.4e-142 508.8 367 69.8
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.2e-141 506.5 402 65.7
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.7e-141 505.8 328 79.6
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 3.7e-141 505.8 542 53.5
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 6.3e-141 505.0 365 68.2
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.1e-140 502.3 360 68.9
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 7.0e-140 501.5 439 59.7
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 4.5e-139 498.8 360 68.9
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.0e-138 497.7 337 72.1
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.3e-138 497.3 365 68.8
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.3e-138 496.5 360 68.6
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.9e-137 493.4 450 59.8
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 9.5e-137 491.1 326 73.6
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 1.0e-135 487.6 366 66.1
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 5.2e-135 485.3 438 58.2
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 2.0e-134 483.4 452 58.0
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.0e-134 483.4 453 56.7
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 4.4e-134 482.3 465 57.0
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 9.8e-134 481.1 471 56.7
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.3e-133 480.7 487 54.8
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-133 480.3 371 65.0
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 3.7e-133 479.2 362 65.7
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 3.7e-133 479.2 355 66.8
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 8.3e-133 478.0 415 60.0
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 8.3e-133 478.0 371 64.4
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 1.4e-132 477.2 317 72.9
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 1.8e-132 476.9 366 66.1
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.3e-130 470.7 336 68.5
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-129 467.6 360 65.6
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 9.5e-129 464.5 364 64.0
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 1.6e-128 463.8 354 65.0
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 8.0e-128 461.5 372 61.6
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 2.3e-127 459.9 355 64.2
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 4.0e-127 459.1 370 61.1
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 4.0e-127 459.1 369 61.5
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 8.9e-127 458.0 373 62.5
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 3.4e-126 456.1 380 61.1
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-125 453.8 409 60.9
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 2.2e-125 453.4 421 57.2
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 3.7e-125 452.6 362 60.5
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 3.7e-125 452.6 341 66.3
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 5.4e-124 448.7 305 69.5
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.0e-124 448.4 349 65.0
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.2e-123 447.6 372 63.2
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.8e-123 444.9 358 63.4
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.0e-122 444.5 375 60.5
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.0e-122 444.5 387 59.4
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 2.3e-122 443.4 350 63.4
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.1e-121 441.0 328 65.9
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.1e-121 441.0 357 63.6
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 2.5e-121 439.9 327 68.5
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 9.5e-121 438.0 319 66.8
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.0e-119 432.6 328 65.2
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.3e-117 427.6 359 61.0
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.2e-117 426.8 349 59.9
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 2.9e-117 426.4 318 66.4
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 4.0e-111 406.0 334 63.2
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 5.8e-110 402.1 265 74.0
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.5e-107 392.9 387 53.2
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.9e-105 387.1 295 62.4
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 3.1e-103 379.8 437 47.4
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.2e-102 377.9 256 71.1
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-99 367.5 375 53.6
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 1.6e-96 357.5 273 63.7
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 3.1e-95 353.2 236 73.3
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 1.7e-85 320.9 372 51.3
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.4e-84 317.0 313 54.6
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.1e-76 291.6 211 67.3
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 1.5e-73 281.2 210 64.3
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.5e-73 280.4 275 52.7
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.3e-72 278.1 236 55.9
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.0e-70 270.8 293 44.4
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 1.3e-66 258.1 234 55.6
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 5.7e-65 252.7 275 49.8
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 3.0e-58 230.3 193 61.1
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.3e-57 226.5 154 69.5
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 5.7e-57 226.1 175 62.9
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.2e-53 214.2 253 45.1
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.9e-52 211.1 293 42.0
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 1.2e-51 208.4 191 52.4
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 5.0e-45 186.4 203 49.3
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.1e-44 185.3 262 46.2
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 9.4e-44 182.2 193 52.8
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 1.3e-40 171.8 212 52.8
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 6.3e-40 169.5 186 48.4
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 2.0e-38 164.5 331 36.9
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 2.7e-35 154.1 155 51.0
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 1.0e-34 152.1 109 63.3
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 1.1e-31 142.1 195 44.1
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.0e-30 137.9 232 42.2
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.2e-27 128.6 90 64.4
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 4.0e-26 123.6 145 48.3
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 3.4e-25 120.6 310 30.6
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 9.8e-25 119.0 78 74.4
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 2.4e-23 114.4 103 58.3
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 9.1e-23 112.5 107 52.3
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.2e-22 112.1 206 35.9
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 3.5e-22 110.5 205 37.1
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 1.3e-21 108.6 108 52.8
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 2.5e-20 104.4 60 85.0
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 1.6e-19 101.7 172 36.0
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 1.8e-18 98.2 63 73.0
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 1.2e-17 95.5 105 49.5
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 1.1e-15 89.0 61 68.9
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 7.8e-14 82.8 249 27.7
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 6.6e-13 79.7 311 24.1
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 1.9e-12 78.2 70 57.1
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.4e-10 72.0 62 51.6
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 4.0e-10 70.5 260 24.6
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.7e-08 65.1 251 23.9
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 3.2e-07 60.8 192 25.5


User provided reference genes

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