Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 3.3e-143 511.9 305 100.0
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 4.0e-88 328.9 316 61.1
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 1.7e-75 287.0 318 56.6
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 6.9e-72 275.0 318 58.5
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 2.7e-68 263.1 317 53.9
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 1.9e-66 256.9 322 52.8
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 9.0e-64 248.1 317 51.7
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 3.8e-62 242.7 320 50.3
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 1.8e-59 233.8 311 52.1
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 9.0e-56 221.5 323 52.3
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 4.5e-55 219.2 329 52.0
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 4.5e-55 219.2 315 51.1
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 1.7e-54 217.2 320 50.6
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 4.9e-54 215.7 310 46.8
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 1.1e-53 214.5 318 51.9
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 9.3e-53 211.5 319 46.1
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 6.0e-52 208.8 319 50.2
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 7.9e-52 208.4 322 51.2
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 1.3e-51 207.6 322 51.6
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 2.1e-49 200.3 307 46.6
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 2.8e-49 199.9 322 47.2
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 3.7e-49 199.5 312 43.3
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 6.3e-49 198.7 304 47.4
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 1.1e-48 198.0 327 44.0
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 2.4e-48 196.8 323 40.6
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 2.4e-48 196.8 327 45.0
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 3.1e-48 196.4 329 45.9
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 4.1e-48 196.1 316 45.6
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 4.1e-48 196.1 319 45.8
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 4.1e-48 196.1 327 45.3
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 6.9e-48 195.3 320 49.1
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 6.9e-48 195.3 321 49.2
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 6.9e-48 195.3 329 49.2
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 1.2e-47 194.5 315 45.7
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 2.6e-47 193.4 343 42.3
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 7.6e-47 191.8 333 42.3
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 1.0e-46 191.4 308 46.8
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 2.5e-45 186.8 347 41.2
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 3.2e-45 186.4 321 41.7
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 5.5e-45 185.7 313 46.0
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 1.6e-44 184.1 342 48.0
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.7e-44 183.3 328 47.3
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 4.6e-44 182.6 340 44.1
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 4.6e-44 182.6 319 44.8
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 1.0e-43 181.4 277 45.5
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 1.3e-43 181.0 338 39.1
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 1.3e-43 181.0 329 41.3
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 8.7e-43 178.3 331 42.0
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 1.1e-42 177.9 316 40.8
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 1.5e-42 177.6 326 42.3
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.5e-42 177.6 312 40.4
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 2.5e-42 176.8 334 47.0
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 3.3e-42 176.4 311 46.0
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 1.3e-41 174.5 316 47.5
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 1.7e-41 174.1 316 44.3
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.7e-41 174.1 333 45.6
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 2.2e-41 173.7 316 43.0
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 1.8e-40 170.6 325 45.8
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 6.9e-40 168.7 318 44.0
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 9.1e-40 168.3 337 40.7
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 1.5e-39 167.5 307 45.9
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 5.9e-39 165.6 311 43.1
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 1.0e-38 164.9 290 43.8
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 2.2e-38 163.7 318 41.5
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 6.5e-38 162.2 178 53.9
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 6.5e-38 162.2 306 40.8
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 6.5e-38 162.2 328 45.7
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 1.2e-36 157.9 337 41.5
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 3.6e-36 156.4 346 38.7
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 6.1e-36 155.6 323 40.9
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 3.0e-35 153.3 346 39.3
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 5.1e-35 152.5 308 38.3
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 4.8e-33 146.0 305 40.3
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 8.2e-33 145.2 326 36.5
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 1.4e-32 144.4 302 40.4
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 9.1e-32 141.7 337 39.8
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 7.7e-31 138.7 318 34.9
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 7.7e-31 138.7 316 39.6
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 3.8e-30 136.3 318 34.6
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 6.5e-30 135.6 309 36.6
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 8.5e-30 135.2 315 40.3
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 1.1e-29 134.8 326 37.7
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 1.4e-29 134.4 314 35.7
Cpa.g.sc48.98 Carica papaya HOM05D005724 ORTHO05D006636 1.9e-29 134.0 235 50.6
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 2.5e-29 133.7 323 40.6
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 2.5e-29 133.7 311 36.7
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 1.6e-28 131.0 318 33.3
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 3.6e-28 129.8 297 41.8
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 4.7e-28 129.4 297 38.0
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 1.8e-27 127.5 300 42.0
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 3.0e-27 126.7 308 44.5
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 8.8e-27 125.2 314 36.6
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.0e-26 124.0 313 39.6
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 4.4e-26 122.9 169 46.7
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 5.7e-26 122.5 316 38.6
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 2.2e-25 120.6 307 36.8
MSTRG.22873 Avicennia marina HOM05D005724 ORTHO05D006636 4.8e-25 119.4 144 50.7
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 2.0e-23 114.0 317 35.6
MELO3C017820.2 Cucumis melo HOM05D005724 ORTHO05D006636 4.5e-23 112.8 108 63.9
MELO3C003738.2 Cucumis melo HOM05D005724 ORTHO05D006636 7.7e-23 112.1 108 62.0
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 7.7e-23 112.1 323 33.1
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 8.5e-22 108.6 307 35.5
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 1.1e-21 108.2 307 33.6
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 2.5e-21 107.1 287 38.0
Nitab4.5_0005621g0090 Nicotiana tabacum HOM05D005724 ORTHO05D006636 3.2e-21 106.7 109 63.3
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 1.2e-20 104.8 325 35.7
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 1.2e-18 98.2 317 33.4
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 2.2e-17 94.0 88 56.8
PSO339G2657 Papaver somniferum HOM05D005724 ORTHO05D006636 1.3e-14 84.7 155 46.5
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 6.5e-14 82.4 258 38.0
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 2.7e-12 77.0 306 30.7
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 4.7e-12 76.3 214 33.6
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 1.8e-11 74.3 368 31.8
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 3.4e-10 70.1 282 29.4
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 9.8e-10 68.6 315 27.3
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 1.3e-09 68.2 317 28.7
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 1.3e-09 68.2 317 28.7
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 1.3e-09 68.2 317 28.1
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 1.7e-09 67.8 218 31.7
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 3.7e-09 66.6 335 26.9
Psat1g166960 Pisum sativum HOM05D005724 ORTHO05D006636 8.3e-09 65.5 183 39.3
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 1.4e-08 64.7 317 27.4
Cfa025790 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.4e-08 64.7 289 27.0


User provided reference genes

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