Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27324 Davidia involucrata HOM05D004094 ORTHO05D004601 2.5e-147 525.4 259 100.0
Dinv07237 Davidia involucrata HOM05D004094 ORTHO05D004601 8.1e-90 334.3 209 79.4
CSS0004297 Camellia sinensis var. sinensis HOM05D004094 ORTHO05D004601 5.6e-67 258.5 197 67.0
vmacro12538 Vaccinium macrocarpon HOM05D004094 ORTHO05D004601 5.7e-59 231.9 193 64.2
TAR625G0515 Trochodendron aralioides HOM05D004094 ORTHO05D004601 2.8e-58 229.6 221 53.8
Rhsim06G0104600 Rhododendron simsii HOM05D004094 ORTHO05D004601 1.8e-57 226.9 187 63.6
QL09p035258 Quercus lobata HOM05D004094 ORTHO05D004601 3.1e-57 226.1 218 57.3
DCAR_017419 Daucus carota HOM05D004094 ORTHO05D004601 9.4e-54 214.5 199 53.8
Oeu047946.1 Olea europaea HOM05D004094 ORTHO05D004601 7.4e-51 204.9 200 54.5
CiPaw.05G222800 Carya illinoinensis HOM05D004094 ORTHO05D004601 8.2e-50 201.4 191 57.6
Haze_00454 Corylus avellana HOM05D004094 ORTHO05D004601 1.8e-49 200.3 209 53.6
DCAR_014092 Daucus carota HOM05D004094 ORTHO05D004601 4.1e-49 199.1 257 43.6
Cfa016008 Carpinus fangiana HOM05D004094 ORTHO05D004601 5.3e-49 198.7 209 53.1
Nitab4.5_0000633g0220 Nicotiana tabacum HOM05D004094 ORTHO05D004601 1.5e-48 197.2 195 48.2
Peaxi162Scf00051g00911 Petunia axillaris HOM05D004094 ORTHO05D004601 3.4e-48 196.1 206 48.5
Cc00_g04280 Coffea canephora HOM05D004094 ORTHO05D004601 4.5e-48 195.7 218 48.6
HanXRQChr10g0304931 Helianthus annuus HOM05D004094 ORTHO05D004601 4.5e-48 195.7 195 52.3
RcHm_v2.0_Chr6g0295641 Rosa chinensis HOM05D004094 ORTHO05D004601 5.9e-48 195.3 200 49.5
Nitab4.5_0004044g0030 Nicotiana tabacum HOM05D004094 ORTHO05D004601 1.7e-47 193.7 195 48.2
GSVIVG01008880001 Vitis vinifera HOM05D004094 ORTHO05D004601 2.2e-47 193.4 174 57.5
Prupe.1G499900 Prunus persica HOM05D004094 ORTHO05D004601 1.9e-46 190.3 198 50.0
ECA234G0673 Erigeron canadensis HOM05D004094 ORTHO05D004601 5.5e-46 188.7 205 49.8
FAN15G0810 Fragaria x ananassa HOM05D004094 ORTHO05D004601 2.1e-45 186.8 199 49.7
FAN20G0223 Fragaria x ananassa HOM05D004094 ORTHO05D004601 2.1e-45 186.8 199 49.7
FAN24G0267 Fragaria x ananassa HOM05D004094 ORTHO05D004601 6.1e-45 185.3 199 49.2
MSTRG.1451 Avicennia marina HOM05D004094 ORTHO05D004601 7.9e-45 184.9 186 50.5
FvH4_2g26770 Fragaria vesca HOM05D004094 ORTHO05D004601 1.0e-44 184.5 199 49.2
Aqoxy6G00193 Aquilegia oxysepala HOM05D004094 ORTHO05D004601 1.4e-44 184.1 195 50.8
Nn1g08759 Nelumbo nucifera HOM05D004094 ORTHO05D004601 1.4e-44 184.1 199 48.2
Migut.C01138 Erythranthe guttata HOM05D004094 ORTHO05D004601 3.0e-44 183.0 203 47.3
SalBow7G0426 Salvia bowleyana HOM05D004094 ORTHO05D004601 8.8e-44 181.4 221 46.2
Solyc06g060350.4 Solanum lycopersicum HOM05D004094 ORTHO05D004601 8.8e-44 181.4 170 50.0
FAN20G1705 Fragaria x ananassa HOM05D004094 ORTHO05D004601 2.6e-43 179.9 218 45.9
FAN27G0677 Fragaria x ananassa HOM05D004094 ORTHO05D004601 3.3e-43 179.5 224 45.5
Sopen06g020480 Solanum pennellii HOM05D004094 ORTHO05D004601 5.7e-43 178.7 170 48.8
MD15G1351000 Malus domestica HOM05D004094 ORTHO05D004601 7.4e-43 178.3 201 45.3
Lsat_1_v5_gn_5_126560 Lactuca sativa HOM05D004094 ORTHO05D004601 2.8e-42 176.4 187 49.7
PGSC0003DMG400017557 Solanum tuberosum HOM05D004094 ORTHO05D004601 3.7e-42 176.0 170 48.2
Gorai.010G049800 Gossypium raimondii HOM05D004094 ORTHO05D004601 6.3e-42 175.3 196 45.9
Gohir.D06G044700 Gossypium hirsutum HOM05D004094 ORTHO05D004601 8.2e-42 174.9 196 46.4
Thecc.08G123800 Theobroma cacao HOM05D004094 ORTHO05D004601 1.8e-41 173.7 218 45.4
Gohir.A06G043800 Gossypium hirsutum HOM05D004094 ORTHO05D004601 4.1e-41 172.6 196 45.9
Potri.005G177000 Populus trichocarpa HOM05D004094 ORTHO05D004601 4.1e-41 172.6 216 45.4
Ciclev10000067m.g Citrus clementina HOM05D004094 ORTHO05D004601 3.8e-39 166.0 192 46.9
Sabra05G0133600 Salix brachista HOM05D004094 ORTHO05D004601 8.5e-39 164.9 218 44.5
COL.COLO4_35940 Corchorus olitorius HOM05D004094 ORTHO05D004601 1.4e-38 164.1 196 48.0
Lj7A339G40 Lonicera japonica HOM05D004094 ORTHO05D004601 9.4e-38 161.4 131 65.6
Potri.002G084700 Populus trichocarpa HOM05D004094 ORTHO05D004601 6.1e-37 158.7 220 43.6
Sabra02G0066100 Salix brachista HOM05D004094 ORTHO05D004601 1.8e-36 157.1 215 44.7
Duzib041G0387 Durio zibethinus HOM05D004094 ORTHO05D004601 3.7e-34 149.4 201 43.3
Manes.02G162400 Manihot esculenta HOM05D004094 ORTHO05D004601 3.7e-34 149.4 191 44.0
Eucgr.F03782 Eucalyptus grandis HOM05D004094 ORTHO05D004601 6.3e-34 148.7 190 44.2
PSO782G4804 Papaver somniferum HOM05D004094 ORTHO05D004601 8.2e-34 148.3 192 42.2
PSO170G3655 Papaver somniferum HOM05D004094 ORTHO05D004601 1.1e-33 147.9 210 40.5
SGA_v2.0_scaffold24G10467 Striga asiatica HOM05D004094 ORTHO05D004601 5.3e-33 145.6 186 43.5
CsaV3_4G028330 Cucumis sativus L. HOM05D004094 ORTHO05D004601 1.0e-31 141.4 194 44.8
MELO3C010472.2 Cucumis melo HOM05D004094 ORTHO05D004601 8.5e-31 138.3 188 44.7
Sc23g0000720 Simmondsia chinensis HOM05D004094 ORTHO05D004601 8.5e-31 138.3 192 41.7
CANSAT64G2400 Cannabis sativa HOM05D004094 ORTHO05D004601 1.1e-30 137.9 199 41.7
AUR62019047 Chenopodium quinoa HOM05D004094 ORTHO05D004601 1.5e-30 137.5 193 43.0
Actinidia02614 Actinidia chinensis HOM05D004094 ORTHO05D004601 2.5e-30 136.7 173 50.9
ClCG11G015680 Citrullus lanatus HOM05D004094 ORTHO05D004601 1.6e-29 134.0 179 43.0
Hund16854 Selenicereus undatus HOM05D004094 ORTHO05D004601 2.7e-29 133.3 190 40.5
ATR0684G176 Amborella trichopoda HOM05D004094 ORTHO05D004601 6.1e-29 132.1 205 37.6
AUR62027887 Chenopodium quinoa HOM05D004094 ORTHO05D004601 2.3e-28 130.2 198 42.4
TWI12G0492 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 2.3e-28 130.2 202 42.1
HPP92_002183 Vanilla planifolia HOM05D004094 ORTHO05D004601 2.3e-28 130.2 216 36.1
Ca_12613_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 3.0e-28 129.8 166 45.8
Sed0014690 Sechium edule HOM05D004094 ORTHO05D004601 8.8e-28 128.3 244 34.8
Lj1g0018898 Lotus japonicus HOM05D004094 ORTHO05D004601 4.4e-27 125.9 162 45.1
TWI36G0382 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 5.7e-27 125.6 202 41.1
Sc01g0001180 Simmondsia chinensis HOM05D004094 ORTHO05D004601 2.2e-26 123.6 183 40.4
Psat6g041960 Pisum sativum HOM05D004094 ORTHO05D004601 2.8e-26 123.2 173 43.9
unitig_26.g9911 Utricularia gibba HOM05D004094 ORTHO05D004601 4.8e-26 122.5 227 34.8
Lalb_Chr04g0253401 Lupinus albus HOM05D004094 ORTHO05D004601 1.1e-25 121.3 208 38.0
PGR042G1714 Punica granatum HOM05D004094 ORTHO05D004601 1.8e-25 120.6 254 33.9
Medtr1g030410 Medicago truncatula HOM05D004094 ORTHO05D004601 4.1e-25 119.4 169 43.8
TPR.G25784 Trifolium pratense HOM05D004094 ORTHO05D004601 4.1e-25 119.4 172 40.7
arahy.Tifrunner.gnm1.ann1.WV2Q7U Arachis hypogaea HOM05D004094 ORTHO05D004601 2.0e-24 117.1 178 42.7
VMungo0647G0510 Vigna mungo HOM05D004094 ORTHO05D004601 2.7e-24 116.7 161 43.5
EL10Ac1g01050 Beta vulgaris HOM05D004094 ORTHO05D004601 4.5e-24 115.9 200 36.5
Ca_15191_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 4.5e-24 115.9 159 47.2
arahy.Tifrunner.gnm1.ann1.1LZC07 Arachis hypogaea HOM05D004094 ORTHO05D004601 2.2e-23 113.6 181 42.0
THA.LOC104800189 Tarenaya hassleriana HOM05D004094 ORTHO05D004601 1.5e-22 110.9 205 37.1
Medtr3g072400 Medicago truncatula HOM05D004094 ORTHO05D004601 1.9e-22 110.5 160 43.1
TPR.G24027 Trifolium pratense HOM05D004094 ORTHO05D004601 5.5e-22 109.0 160 45.0
Phvul.008G163600 Phaseolus vulgaris HOM05D004094 ORTHO05D004601 4.7e-21 105.9 161 39.8
Phvul.009G124500 Phaseolus vulgaris HOM05D004094 ORTHO05D004601 4.7e-21 105.9 188 39.9
Lj1g0022360 Lotus japonicus HOM05D004094 ORTHO05D004601 1.0e-20 104.8 160 41.9
Cpa.g.sc36.56 Carica papaya HOM05D004094 ORTHO05D004601 4.0e-20 102.8 190 35.3
VMungo1309G1727 Vigna mungo HOM05D004094 ORTHO05D004601 5.2e-20 102.4 192 38.0
Psat5g131960 Pisum sativum HOM05D004094 ORTHO05D004601 6.8e-20 102.1 160 43.8
VMungo1383G1238 Vigna mungo HOM05D004094 ORTHO05D004601 8.8e-20 101.7 203 37.9
Glyma.14G148700 Glycine max HOM05D004094 ORTHO05D004601 1.5e-19 100.9 161 42.2
Lalb_Chr23g0271001 Lupinus albus HOM05D004094 ORTHO05D004601 1.5e-19 100.9 164 39.6
arahy.Tifrunner.gnm1.ann1.HK9WB5 Arachis hypogaea HOM05D004094 ORTHO05D004601 2.2e-18 97.1 144 43.1
Glyma.04G250200 Glycine max HOM05D004094 ORTHO05D004601 4.8e-18 95.9 216 33.3
arahy.Tifrunner.gnm1.ann1.3295S8 Arachis hypogaea HOM05D004094 ORTHO05D004601 2.4e-17 93.6 143 41.3
BraA07t31822Z Brassica rapa HOM05D004094 ORTHO05D004601 3.5e-16 89.7 166 33.7
Duzib093G2002 Durio zibethinus HOM05D004094 ORTHO05D004601 3.5e-16 89.7 112 42.0
Glyma.06G112600 Glycine max HOM05D004094 ORTHO05D004601 3.5e-16 89.7 187 34.2
BcaC08g47600 Brassica carinata HOM05D004094 ORTHO05D004601 4.5e-16 89.4 165 32.1
BolC6t40183H Brassica oleracea HOM05D004094 ORTHO05D004601 4.5e-16 89.4 165 32.1
A07p43010 Brassica napus HOM05D004094 ORTHO05D004601 7.7e-16 88.6 166 33.7
AL2G37830 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 1.3e-15 87.8 166 33.1
BcaB05g25063 Brassica carinata HOM05D004094 ORTHO05D004601 1.3e-15 87.8 169 36.7
C06p51630 Brassica napus HOM05D004094 ORTHO05D004601 2.3e-15 87.0 200 30.0
AL142U10030 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 2.9e-15 86.7 166 32.5
Aa31LG4G7730 Aethionema arabicum HOM05D004094 ORTHO05D004601 5.0e-15 85.9 199 34.2
CDE06G0603 Ceratophyllum demersum HOM05D001730 ORTHO05D005730 5.0e-15 85.9 202 30.2
Ca_14821_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 8.6e-15 85.1 115 47.0
Carub.0002s2451 Capsella rubella HOM05D004094 ORTHO05D004601 1.5e-14 84.3 166 34.3
Thhalv10018028m.g Eutrema salsugineum HOM05D004094 ORTHO05D004601 3.3e-14 83.2 166 33.1
Sp5g32780 Schrenkiella parvula HOM05D004094 ORTHO05D004601 3.3e-14 83.2 166 33.1
AT1G77620 Arabidopsis thaliana HOM05D004094 ORTHO05D004601 5.5e-14 82.4 169 32.0
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 3.6e-13 79.7 166 33.1
Os03g0262300 Oryza sativa ssp. japonica HOM05D004094 ORTHO05D004601 6.1e-13 79.0 194 32.5
Zm00001eb398150 Zea mays HOM05D004094 ORTHO05D004601 1.4e-12 77.8 187 30.5
Sed0015071 Sechium edule HOM05D004094 ORTHO05D004601 6.3e-10 68.9 207 30.4
FAN15G1439 Fragaria x ananassa HOM05D004094 ORTHO05D004601 1.3e-07 61.2 67 47.8
Duzib093G1173 Durio zibethinus HOM05D004094 ORTHO05D004601 1.7e-07 60.8 60 48.3
TAR381G0811 Trochodendron aralioides HOM05D004094 ORTHO05D004601 2.3e-07 60.5 87 41.4
FAN27G0079 Fragaria x ananassa HOM05D004094 ORTHO05D004601 2.5e-06 57.0 63 47.6
BcaC03g15753 Brassica carinata HOM05D004094 ORTHO05D004601 3.3e-06 56.6 158 30.4


User provided reference genes

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