Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 1.5e-158 562.8 280 100.0
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 2.9e-133 478.8 279 84.2
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 5.4e-132 474.6 280 83.2
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.2e-132 473.8 280 83.6
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.2e-132 473.8 280 83.6
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.9e-129 466.1 280 83.6
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 1.6e-123 446.4 280 81.8
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 1.8e-119 433.0 279 77.4
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 5.3e-119 431.4 282 75.9
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 6.9e-119 431.0 268 78.4
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 2.6e-118 429.1 271 76.8
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 5.8e-118 427.9 280 77.9
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 8.4e-117 424.1 287 74.9
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 1.1e-116 423.7 277 75.5
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 5.4e-116 421.4 274 76.6
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 5.4e-116 421.4 271 77.1
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 2.7e-115 419.1 270 75.9
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 1.0e-114 417.2 279 73.8
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 3.0e-114 415.6 272 74.6
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 6.7e-114 414.5 274 75.2
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 6.7e-114 414.5 280 75.0
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 8.7e-114 414.1 274 73.4
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 8.7e-114 414.1 279 72.8
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.1e-113 413.7 257 77.8
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 1.5e-113 413.3 274 75.5
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.5e-113 413.3 274 75.5
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 4.3e-113 411.8 283 73.9
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 5.6e-113 411.4 284 72.2
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.6e-112 409.8 247 80.6
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 2.1e-112 409.5 274 72.6
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.7e-112 408.7 278 72.3
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 6.2e-112 407.9 276 74.3
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 8.1e-112 407.5 273 76.2
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.8e-111 406.4 272 75.4
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.4e-111 406.0 264 77.3
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 4.0e-111 405.2 282 73.0
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 6.9e-111 404.4 261 75.1
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 2.0e-110 402.9 272 72.1
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 2.6e-110 402.5 282 74.8
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 4.5e-110 401.7 280 71.1
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 5.8e-110 401.4 276 73.2
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.7e-109 399.8 285 70.5
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 1.4e-108 396.7 349 62.2
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.2e-108 395.6 289 69.2
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 3.2e-108 395.6 270 70.4
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 5.5e-108 394.8 281 70.1
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 9.3e-108 394.0 277 73.3
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.6e-107 393.3 270 70.0
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.3e-106 390.2 267 73.4
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 1.3e-106 390.2 270 70.0
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 2.3e-106 389.4 282 69.5
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 3.0e-106 389.0 274 72.3
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 3.9e-106 388.7 282 69.5
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 5.1e-106 388.3 260 76.2
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 8.7e-106 387.5 260 76.2
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 1.1e-105 387.1 282 69.5
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 1.1e-105 387.1 282 69.5
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 1.1e-105 387.1 281 71.9
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 3.3e-105 385.6 275 69.8
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.3e-104 383.6 287 72.5
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.3e-104 383.6 287 72.5
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 6.2e-104 381.3 278 66.5
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 1.1e-103 380.6 287 71.8
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.1e-103 380.6 275 69.5
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 1.8e-103 379.8 275 69.5
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 2.4e-103 379.4 287 71.4
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 5.8e-102 374.8 275 68.7
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.3e-101 373.6 269 69.1
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 1.3e-101 373.6 264 72.7
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 2.9e-101 372.5 278 68.7
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 6.5e-101 371.3 279 66.3
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 3.2e-100 369.0 261 72.8
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 4.6e-99 365.2 253 74.3
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 7.9e-99 364.4 273 66.3
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.0e-98 364.0 276 71.0
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 1.0e-98 364.0 258 71.3
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 2.3e-98 362.8 274 68.2
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 3.0e-98 362.5 267 69.3
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 6.7e-98 361.3 258 69.8
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 3.3e-97 359.0 275 66.5
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 4.3e-97 358.6 284 64.4
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 5.7e-97 358.2 264 64.4
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.3e-96 357.1 277 67.1
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 4.8e-96 355.1 285 64.2
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 4.8e-96 355.1 277 67.5
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 3.2e-92 342.4 277 67.1
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 5.5e-92 341.7 288 66.0
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 3.0e-90 335.9 273 63.7
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 4.4e-81 305.4 266 59.8
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.2e-75 287.3 188 76.1
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 4.7e-75 285.4 191 72.3
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 1.0e-74 284.3 171 79.5
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.4e-73 278.9 176 77.8
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 8.2e-72 274.6 176 76.7
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 3.5e-70 269.2 178 71.3
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 7.2e-68 261.5 271 56.1
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 2.8e-64 249.6 169 71.6
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.5e-60 237.3 137 79.6
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 5.2e-58 228.8 174 66.1
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 6.8e-58 228.4 157 71.3
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.5e-57 227.3 270 45.6
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.4e-55 220.7 264 48.9
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.4e-55 220.7 275 45.8
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 9.8e-49 198.0 273 44.7
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 1.3e-48 197.6 273 44.7
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.7e-48 196.1 289 46.7
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 6.1e-43 178.7 216 46.3
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.3e-40 171.0 141 66.7
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 3.2e-39 166.4 278 40.3
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 1.4e-31 141.0 82 82.9
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 7.8e-30 135.2 92 70.7
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 6.6e-29 132.1 78 79.5
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 1.1e-23 114.8 150 44.7
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 8.1e-19 98.6 76 63.2
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.0e-18 96.3 174 40.2
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 9.9e-17 91.7 69 62.3
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 6.4e-16 89.0 65 66.2
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 4.2e-15 86.3 82 50.0
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.3e-13 81.3 130 40.8


User provided reference genes

Program Settings