Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 1.4e-195 686.0 328 100.0
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 2.0e-173 612.5 328 87.5
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 7.4e-173 610.5 328 87.2
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 9.1e-171 603.6 328 86.0
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.5e-170 602.8 328 85.4
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 1.0e-169 600.1 329 85.4
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.3e-169 599.7 328 85.1
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.3e-169 599.7 328 85.7
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 1.9e-168 595.9 327 82.9
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 1.6e-167 592.8 326 83.1
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 2.1e-167 592.4 328 82.9
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 3.9e-166 588.2 328 81.4
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 3.9e-166 588.2 326 82.8
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 6.7e-166 587.4 328 81.1
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 8.8e-166 587.0 328 81.7
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 1.5e-165 586.3 328 81.7
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 2.0e-165 585.9 328 81.7
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 5.7e-165 584.3 328 82.0
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 7.4e-165 583.9 327 82.3
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 7.4e-165 583.9 326 81.6
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 9.7e-165 583.6 326 81.6
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 1.7e-164 582.8 328 80.8
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 3.1e-163 578.6 327 80.4
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 1.6e-162 576.2 327 80.1
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 2.6e-162 575.5 328 81.1
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 2.6e-162 575.5 328 82.0
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 2.6e-162 575.5 320 81.6
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 3.5e-162 575.1 326 81.0
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 4.5e-162 574.7 325 80.6
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 4.5e-162 574.7 328 82.9
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.0e-161 573.5 328 80.2
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.7e-161 572.8 328 79.9
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 2.9e-161 572.0 325 80.6
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 3.8e-161 571.6 331 81.3
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.8e-161 571.6 328 80.2
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 5.0e-161 571.2 328 80.5
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 1.1e-160 570.1 326 78.8
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.5e-160 569.7 328 80.2
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 5.5e-160 567.8 328 78.4
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.2e-159 566.6 329 80.5
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 2.7e-159 565.5 327 80.1
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 6.1e-159 564.3 317 82.0
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 6.1e-159 564.3 317 82.0
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 1.0e-158 563.5 326 81.0
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 2.3e-158 562.4 328 78.7
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 8.8e-158 560.5 329 79.0
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 5.7e-157 557.8 327 78.6
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 5.7e-157 557.8 328 79.0
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 7.5e-157 557.4 329 78.7
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 9.7e-157 557.0 330 79.1
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 1.3e-156 556.6 330 79.1
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.4e-155 553.1 328 78.7
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 3.1e-155 552.0 328 79.6
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 7.0e-155 550.8 327 78.9
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 9.1e-155 550.4 330 78.2
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 2.0e-154 549.3 330 77.6
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 3.5e-154 548.5 330 78.5
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 3.5e-154 548.5 341 77.1
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 5.9e-154 547.7 327 76.8
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 7.7e-154 547.4 308 79.9
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.0e-153 547.0 335 75.8
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.3e-153 546.6 328 76.5
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 5.0e-153 544.7 330 78.2
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.1e-152 543.5 328 76.8
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 5.5e-152 541.2 320 77.2
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 7.2e-152 540.8 328 76.2
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 1.6e-151 539.7 346 74.9
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 1.0e-150 537.0 341 74.8
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 5.2e-150 534.6 330 76.4
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 6.8e-150 534.3 338 75.1
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 1.2e-149 533.5 310 79.4
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 2.0e-149 532.7 325 74.8
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 5.7e-149 531.2 326 76.7
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.7e-148 529.6 326 76.4
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 5.4e-147 524.6 328 75.3
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 2.7e-146 522.3 326 74.8
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 1.5e-144 516.5 328 71.0
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 5.5e-144 514.6 315 75.9
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 7.2e-144 514.2 313 76.4
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 9.4e-144 513.8 328 71.3
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.7e-143 512.3 312 76.6
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 3.6e-143 511.9 328 72.3
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 4.7e-143 511.5 328 72.3
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 4.0e-142 508.4 328 72.9
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 5.7e-141 504.6 328 71.0
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 7.5e-141 504.2 328 71.0
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 1.0e-137 493.8 328 71.3
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 1.3e-132 476.9 253 85.8
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 2.3e-129 466.1 319 70.5
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.3e-129 466.1 325 65.5
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.9e-129 465.3 325 65.2
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.5e-128 463.4 255 84.3
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 4.9e-124 448.4 277 75.5
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 5.4e-123 444.9 306 66.0
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.6e-122 443.4 254 80.3
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.0e-122 443.0 256 79.7
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 1.7e-121 439.9 328 62.2
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 1.6e-119 433.3 328 64.0
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 2.3e-118 429.5 309 64.7
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 7.5e-117 424.5 254 79.1
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 5.1e-113 411.8 309 60.5
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 4.7e-111 405.2 241 75.9
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.1e-107 394.0 317 56.2
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 4.7e-103 378.6 220 81.8
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 6.6e-97 358.2 198 83.8
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 2.4e-91 339.7 312 53.2
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 1.3e-81 307.4 166 80.1
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 1.6e-63 247.3 144 84.0
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 1.1e-54 218.0 132 78.0
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 6.1e-50 202.2 142 61.3
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 3.1e-46 189.9 115 75.7
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 1.3e-44 184.5 307 37.5
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 5.5e-43 179.1 294 35.7
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 5.7e-40 169.1 308 33.8
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.3e-31 141.4 109 56.9
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.1e-30 138.3 111 64.9
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 4.1e-30 136.3 78 85.9
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 1.2e-29 134.8 82 69.5
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 4.2e-27 126.3 133 51.1
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.0e-25 120.2 68 69.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 3.5e-21 106.7 72 69.4
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.3e-20 104.8 58 81.0
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 6.1e-18 95.9 69 62.3
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 6.6e-12 75.9 62 64.5
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.6e-08 63.9 37 75.7
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 9.8e-08 62.0 40 62.5
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.9e-07 60.5 39 79.5


User provided reference genes

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