Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 7.2e-100 367.5 215 100.0
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 7.5e-57 224.6 216 57.4
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 5.6e-52 208.4 228 52.6
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.7e-46 189.5 218 51.8
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.5e-44 183.0 218 49.5
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 5.6e-44 181.8 230 48.7
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 2.8e-43 179.5 227 48.0
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 4.7e-43 178.7 234 48.7
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 8.1e-43 177.9 218 48.2
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.1e-42 177.6 218 49.1
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.7e-40 170.2 189 53.4
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 2.2e-40 169.9 227 46.3
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 1.1e-39 167.5 234 45.7
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.4e-39 167.2 233 42.9
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 9.2e-39 164.5 227 47.1
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 9.2e-39 164.5 234 45.3
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 1.2e-38 164.1 246 43.1
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.6e-38 163.7 244 43.9
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.1e-38 163.3 214 47.7
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 2.7e-38 162.9 234 43.6
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 3.5e-38 162.5 230 45.2
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 4.6e-38 162.2 233 42.1
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.3e-37 160.6 223 47.1
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.3e-37 160.6 232 43.5
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 2.3e-37 159.8 226 48.7
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 3.9e-37 159.1 247 47.4
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 3.9e-37 159.1 220 43.6
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 6.6e-37 158.3 240 43.3
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 3.3e-36 156.0 234 40.6
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 2.8e-35 152.9 188 46.8
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 3.6e-35 152.5 245 46.1
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 3.6e-35 152.5 220 49.5
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 4.7e-35 152.1 226 45.1
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 2.3e-34 149.8 220 50.0
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 4.0e-34 149.1 228 41.2
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 5.2e-34 148.7 239 41.0
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 6.8e-34 148.3 218 42.2
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 3.4e-33 146.0 229 41.0
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 3.4e-33 146.0 275 38.2
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 9.9e-33 144.4 244 39.8
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 2.2e-32 143.3 230 41.7
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 6.4e-32 141.7 222 51.8
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 4.6e-30 135.6 211 42.7
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 7.8e-30 134.8 238 39.5
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.0e-29 132.9 218 41.3
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 1.9e-28 130.2 236 38.6
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 3.3e-28 129.4 225 39.1
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 7.3e-28 128.3 173 47.4
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.1e-27 126.7 197 47.2
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 2.1e-27 126.7 186 43.5
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.5e-25 120.6 226 36.7
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 2.6e-25 119.8 227 36.6
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 4.4e-25 119.0 236 36.4
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 5.8e-25 118.6 225 36.4
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 5.8e-25 118.6 201 41.8
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 9.9e-25 117.9 229 38.0
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 9.9e-25 117.9 227 48.0
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 3.8e-24 115.9 230 45.7
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 8.4e-24 114.8 220 35.0
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.1e-23 114.4 215 34.9
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 7.1e-23 111.7 214 35.5
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 1.0e-21 107.8 201 38.3
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 7.3e-20 101.7 212 36.3
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 2.6e-17 93.2 174 33.9
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 3.4e-17 92.8 65 60.0
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 9.9e-17 91.3 220 35.5
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 1.7e-16 90.5 173 32.4
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 1.1e-15 87.8 82 47.6
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.4e-15 86.7 176 33.0
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 2.4e-15 86.7 127 33.9
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 3.2e-15 86.3 126 35.7
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 4.2e-15 85.9 168 38.1
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 4.2e-15 85.9 232 28.0
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 5.4e-15 85.5 215 30.2
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 5.4e-15 85.5 131 35.9
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 5.4e-15 85.5 177 29.4
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.2e-14 84.3 136 34.6
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 1.2e-14 84.3 123 37.4
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.1e-14 83.6 82 42.7
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 3.5e-14 82.8 127 35.4
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 4.6e-14 82.4 222 28.8
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 6.0e-14 82.0 82 40.2
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 7.9e-14 81.6 155 40.0
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 1.0e-13 81.3 221 29.9
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.3e-13 80.9 169 32.5
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 3.0e-13 79.7 226 31.9
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 3.0e-13 79.7 125 37.6
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.0e-13 79.7 168 33.3
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 6.7e-13 78.6 231 31.2
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.5e-12 77.4 82 41.5
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.5e-12 77.4 229 27.5
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 1.9e-12 77.0 136 30.1
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.9e-12 77.0 50 70.0
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.9e-12 77.0 175 30.9
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.5e-12 76.6 190 32.1
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.5e-12 76.6 190 32.1
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 3.3e-12 76.3 187 32.1
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 3.3e-12 76.3 189 29.6
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 4.3e-12 75.9 187 31.0
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 4.3e-12 75.9 217 30.4
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 5.6e-12 75.5 173 29.5
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 7.4e-12 75.1 162 37.0
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.3e-11 74.3 152 29.6
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 1.3e-11 74.3 159 36.5
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 1.6e-11 73.9 214 29.4
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.1e-11 73.6 223 29.1
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.1e-11 73.6 234 28.2
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 4.8e-11 72.4 190 28.9
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 6.2e-11 72.0 82 41.5
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 8.1e-11 71.6 190 30.0
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 8.1e-11 71.6 179 28.5
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.1e-10 71.2 130 33.1
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 1.1e-10 71.2 130 33.1
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 1.1e-10 71.2 130 33.1
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 1.1e-10 71.2 159 36.5
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.4e-10 70.1 234 27.8
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 4.0e-10 69.3 191 28.3
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.2e-09 67.8 245 28.2
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 2.6e-09 66.6 190 27.9
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 1.3e-08 64.3 236 26.3
Cfa018567 Carpinus fangiana HOM05D000187 ORTHO05D000926 2.9e-08 63.2 62 53.2
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 1.9e-07 60.5 57 43.9
MBI06_g44497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 4.2e-07 59.3 217 31.3
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 2.1e-06 57.0 151 31.8
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 2.7e-06 56.6 194 27.8
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 3.5e-06 56.2 128 34.4
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 7.9e-06 55.1 246 24.0


User provided reference genes

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