Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 1.9e-116 422.5 212 100.0
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 2.8e-88 328.9 209 80.4
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 8.1e-88 327.4 212 80.2
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 1.1e-87 327.0 218 78.9
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 1.1e-87 327.0 210 79.0
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 1.8e-87 326.2 212 79.7
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 1.8e-87 326.2 208 78.8
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 9.0e-87 323.9 218 81.7
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 4.4e-86 321.6 210 80.5
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 3.8e-85 318.5 210 78.6
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 3.8e-85 318.5 210 78.6
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.4e-84 315.8 210 77.6
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 4.2e-84 315.1 210 76.7
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 8.7e-82 307.4 214 75.7
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 1.6e-80 303.1 207 76.8
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 8.1e-80 300.8 212 75.5
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 1.4e-79 300.1 214 73.4
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 1.8e-79 299.7 214 75.2
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 4.0e-79 298.5 202 76.2
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 4.0e-79 298.5 202 76.2
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 4.0e-79 298.5 214 73.4
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 6.9e-79 297.7 214 70.6
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 6.9e-79 297.7 215 73.5
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 1.2e-78 297.0 206 74.3
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 1.2e-78 297.0 204 73.0
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 1.2e-78 297.0 204 73.0
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.0e-78 296.2 202 75.7
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 2.0e-78 296.2 215 73.5
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 2.6e-78 295.8 214 72.0
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 5.8e-78 294.7 211 73.5
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 7.6e-78 294.3 217 71.9
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 1.7e-77 293.1 210 73.8
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.2e-77 292.7 202 75.7
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 2.2e-77 292.7 215 71.6
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 4.9e-77 291.6 210 70.5
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 6.4e-77 291.2 214 71.5
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.1e-76 290.4 192 77.6
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 1.1e-76 290.4 205 72.7
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 1.4e-76 290.0 213 73.2
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 1.4e-76 290.0 208 71.2
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 3.2e-76 288.9 216 68.1
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 3.2e-76 288.9 216 68.1
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 7.1e-76 287.7 212 71.7
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 1.6e-75 286.6 211 72.0
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 1.6e-75 286.6 219 69.4
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 1.6e-75 286.6 203 71.4
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.8e-74 283.1 229 67.7
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.3e-74 282.7 212 71.2
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 3.9e-74 282.0 212 70.8
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 1.5e-73 280.0 211 69.2
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 1.9e-73 279.6 215 69.3
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 1.9e-73 279.6 203 71.9
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 2.5e-73 279.3 210 70.5
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 3.3e-73 278.9 204 71.6
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 7.4e-73 277.7 205 69.3
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.3e-72 276.9 211 70.6
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.6e-72 276.6 208 72.1
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 1.6e-72 276.6 200 72.5
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 4.8e-72 275.0 207 73.9
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 4.8e-72 275.0 219 67.6
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 6.2e-72 274.6 204 70.1
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 1.1e-71 273.9 206 71.8
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 1.1e-71 273.9 210 69.5
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 9.0e-71 270.8 209 69.4
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 9.0e-71 270.8 208 70.7
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 4.5e-70 268.5 213 69.0
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 4.5e-70 268.5 208 67.8
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 1.0e-69 267.3 215 68.4
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 1.3e-69 266.9 210 66.2
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 1.1e-68 263.8 200 70.0
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 2.1e-67 259.6 218 65.1
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 7.9e-67 257.7 202 68.8
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 5.1e-66 255.0 202 66.8
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 5.1e-66 255.0 212 65.6
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 6.7e-66 254.6 203 67.5
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.5e-65 253.4 145 84.1
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.3e-65 252.3 202 67.8
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 7.4e-65 251.1 202 66.3
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 9.6e-65 250.8 219 63.9
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 2.8e-64 249.2 220 62.7
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 3.7e-64 248.8 220 62.7
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 3.7e-64 248.8 220 62.7
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 8.2e-64 247.7 206 65.0
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 8.2e-64 247.7 201 65.2
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 1.1e-63 247.3 218 62.4
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 2.4e-63 246.1 218 62.8
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 2.4e-63 246.1 217 63.1
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 2.4e-63 246.1 173 74.0
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 3.1e-63 245.7 206 64.1
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 9.0e-63 244.2 166 75.3
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 2.0e-62 243.0 206 64.1
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 4.5e-62 241.9 216 63.4
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 3.5e-59 232.3 125 86.4
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 9.7e-57 224.2 151 72.8
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 1.3e-53 213.8 207 59.4
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 9.4e-52 207.6 132 73.5
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 4.6e-51 205.3 174 64.4
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 3.0e-50 202.6 151 71.5
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 3.6e-43 179.1 143 61.5
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 3.3e-41 172.6 129 62.8
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 7.4e-41 171.4 126 66.7
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 3.7e-40 169.1 158 61.4
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 2.0e-38 163.3 176 55.7
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 4.2e-36 155.6 82 86.6
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 1.6e-35 153.7 177 54.2
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 4.7e-35 152.1 128 56.2
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 1.8e-34 150.2 146 52.7
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 1.5e-33 147.1 209 47.4
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.4e-31 140.6 141 58.2
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 7.0e-23 111.7 74 70.3
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 2.0e-22 110.2 135 50.4


User provided reference genes

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