Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27258 Davidia involucrata HOM05D006959 ORTHO05D008808 3.8e-91 338.2 175 100.0
Hma1.2p1_0159F.1_g070340 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 5.4e-37 158.3 124 71.0
ClCG08G006070 Citrullus lanatus HOM05D006959 ORTHO05D008808 1.0e-35 154.1 140 61.4
Hma1.2p1_0159F.1_g070330 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 2.9e-35 152.5 125 68.0
Thecc.08G134700 Theobroma cacao HOM05D006959 ORTHO05D008808 5.0e-35 151.8 128 64.8
TAR381G0659 Trochodendron aralioides HOM05D006959 ORTHO05D008808 5.0e-35 151.8 122 67.2
Aqoxy6G00289 Aquilegia oxysepala HOM05D006959 ORTHO05D008808 6.6e-35 151.4 124 66.9
QL09p031413 Quercus lobata HOM05D006959 ORTHO05D008808 1.5e-34 150.2 128 61.7
Migut.C01073 Erythranthe guttata HOM05D006959 ORTHO05D008808 1.9e-34 149.8 124 65.3
Sed0020251 Sechium edule HOM05D006959 ORTHO05D008808 1.9e-34 149.8 124 66.1
GSVIVG01008793001 Vitis vinifera HOM05D006959 ORTHO05D008808 1.9e-34 149.8 124 66.1
Oeu026374.1 Olea europaea HOM05D006959 ORTHO05D008808 2.5e-34 149.4 124 63.7
QL09p031824 Quercus lobata HOM05D006959 ORTHO05D008808 4.3e-34 148.7 128 60.9
FvH4_2g28060 Fragaria vesca HOM05D006959 ORTHO05D008808 5.6e-34 148.3 125 63.2
Ciclev10002542m.g Citrus clementina HOM05D006959 ORTHO05D008808 1.2e-33 147.1 127 65.4
FAN24G0315 Fragaria x ananassa HOM05D006959 ORTHO05D008808 1.2e-33 147.1 125 63.2
Cpa.g.sc64.158 Carica papaya HOM05D006959 ORTHO05D008808 1.6e-33 146.7 127 64.6
FAN27G3284 Fragaria x ananassa HOM05D006959 ORTHO05D008808 1.6e-33 146.7 125 62.4
Nn1g08935 Nelumbo nucifera HOM05D006959 ORTHO05D008808 1.6e-33 146.7 128 64.1
Cc10_g14010 Coffea canephora HOM05D006959 ORTHO05D008808 8.0e-33 144.4 122 63.1
CsaV3_6G033990 Cucumis sativus L. HOM05D006959 ORTHO05D008808 8.0e-33 144.4 120 65.0
SalBow7G4180 Salvia bowleyana HOM05D006959 ORTHO05D008808 8.0e-33 144.4 134 59.0
Atru.chr13.1599 Acer truncatum HOM05D006959 ORTHO05D008808 1.4e-32 143.7 128 63.3
MSTRG.1406 Avicennia marina HOM05D006959 ORTHO05D008808 1.4e-32 143.7 124 62.1
Duzib093G2176 Durio zibethinus HOM05D006959 ORTHO05D008808 1.4e-32 143.7 129 65.1
Gohir.A05G238900 Gossypium hirsutum HOM05D006959 ORTHO05D008808 2.3e-32 142.9 125 63.2
Gohir.D05G240800 Gossypium hirsutum HOM05D006959 ORTHO05D008808 2.3e-32 142.9 125 64.0
Gorai.009G249600 Gossypium raimondii HOM05D006959 ORTHO05D008808 2.3e-32 142.9 125 64.0
RcHm_v2.0_Chr6g0297021 Rosa chinensis HOM05D006959 ORTHO05D008808 2.3e-32 142.9 124 61.3
Haze_17647 Corylus avellana HOM05D006959 ORTHO05D008808 3.1e-32 142.5 124 62.1
MELO3C008461.2 Cucumis melo HOM05D006959 ORTHO05D008808 3.1e-32 142.5 121 63.6
CiPaw.16G022000 Carya illinoinensis HOM05D006959 ORTHO05D008808 5.2e-32 141.7 124 60.5
Cfa018414 Carpinus fangiana HOM05D006959 ORTHO05D008808 6.8e-32 141.4 124 62.1
Manes.18G084200 Manihot esculenta HOM05D006959 ORTHO05D008808 6.8e-32 141.4 124 63.7
Lsat_1_v5_gn_1_10340 Lactuca sativa HOM05D006959 ORTHO05D008808 8.9e-32 141.0 131 58.8
TWI32G1355 Tripterygium wilfordii HOM05D006959 ORTHO05D008808 1.2e-31 140.6 124 60.5
CAN.G46.11 Capsicum annuum HOM05D006959 ORTHO05D008808 1.5e-31 140.2 124 58.9
Phvul.001G066600 Phaseolus vulgaris HOM05D006959 ORTHO05D008808 2.6e-31 139.4 121 61.2
Nitab4.5_0002625g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 3.4e-31 139.0 124 58.9
AUR62007695 Chenopodium quinoa HOM05D006959 ORTHO05D008808 5.8e-31 138.3 124 59.7
Lj4A666T17 Lonicera japonica HOM05D006959 ORTHO05D008808 5.8e-31 138.3 122 63.1
MD15G1131600 Malus domestica HOM05D006959 ORTHO05D008808 5.8e-31 138.3 123 61.0
Solyc04g058200.3 Solanum lycopersicum HOM05D006959 ORTHO05D008808 5.8e-31 138.3 124 58.1
PGSC0003DMG402018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 5.8e-31 138.3 124 58.1
PGSC0003DMG403018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 5.8e-31 138.3 124 58.1
Lj4A663T33 Lonicera japonica HOM05D006959 ORTHO05D008808 7.5e-31 137.9 120 64.2
MBI03_g13506_MAGBIO Magnolia biondii HOM05D006959 ORTHO05D008808 9.8e-31 137.5 125 62.4
HanXRQChr02g0045531 Helianthus annuus HOM05D006959 ORTHO05D008808 1.3e-30 137.1 122 59.8
Peaxi162Scf00066g00072 Petunia axillaris HOM05D006959 ORTHO05D008808 1.3e-30 137.1 124 58.1
Sopen04g026100 Solanum pennellii HOM05D006959 ORTHO05D008808 1.3e-30 137.1 124 57.3
Eucgr.F03861 Eucalyptus grandis HOM05D006959 ORTHO05D008808 1.7e-30 136.7 124 59.7
Potri.002G076700 Populus trichocarpa HOM05D006959 ORTHO05D008808 2.2e-30 136.3 128 61.7
VMungo0647G0259 Vigna mungo HOM05D006959 ORTHO05D008808 2.9e-30 136.0 121 60.3
Glyma.13G035500 Glycine max HOM05D006959 ORTHO05D008808 3.7e-30 135.6 121 62.0
AUR62013448 Chenopodium quinoa HOM05D006959 ORTHO05D008808 6.4e-30 134.8 122 59.0
PSO528G0249 Papaver somniferum HOM05D006959 ORTHO05D008808 8.3e-30 134.4 127 59.1
Hund17359 Selenicereus undatus HOM05D006959 ORTHO05D008808 1.4e-29 133.7 124 60.5
PSO170G0856 Papaver somniferum HOM05D006959 ORTHO05D008808 1.9e-29 133.3 127 59.1
EL10Ac1g01371 Beta vulgaris HOM05D006959 ORTHO05D008808 1.6e-28 130.2 140 52.1
PGR042G0886 Punica granatum HOM05D006959 ORTHO05D008808 4.6e-28 128.6 124 58.1
THA.LOC104813687 Tarenaya hassleriana HOM05D006959 ORTHO05D008808 4.6e-28 128.6 124 56.5
CANSAT64G0796 Cannabis sativa HOM05D006959 ORTHO05D008808 6.0e-28 128.3 123 55.3
arahy.Tifrunner.gnm1.ann1.P1MCWD Arachis hypogaea HOM05D006959 ORTHO05D008808 1.3e-27 127.1 121 60.3
Os02g0553500 Oryza sativa ssp. japonica HOM05D006959 ORTHO05D008808 1.7e-27 126.7 122 54.9
CDE06G1932 Ceratophyllum demersum HOM05D006959 ORTHO05D008808 2.3e-27 126.3 114 61.4
FAN20G3215 Fragaria x ananassa HOM05D006959 ORTHO05D008808 3.0e-27 125.9 125 58.4
Nitab4.5_0008327g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 3.0e-27 125.9 148 50.0
arahy.Tifrunner.gnm1.ann1.84IAJ5 Arachis hypogaea HOM05D006959 ORTHO05D008808 3.9e-27 125.6 121 60.3
Sabra02G0060200 Salix brachista HOM05D006959 ORTHO05D008808 3.9e-27 125.6 184 46.2
Zm00001eb181980 Zea mays HOM05D006959 ORTHO05D008808 5.0e-27 125.2 122 54.1
HPP92_016131 Vanilla planifolia HOM05D006959 ORTHO05D008808 1.9e-26 123.2 123 52.0
COL.COLO4_32963 Corchorus olitorius HOM05D006959 ORTHO05D008808 3.3e-26 122.5 130 55.4
Aa31LG4G7230 Aethionema arabicum HOM05D006959 ORTHO05D008808 4.3e-26 122.1 131 51.9
Actinidia15201 Actinidia chinensis HOM05D006959 ORTHO05D008808 8.1e-25 117.9 124 56.5
Thhalv10019109m.g Eutrema salsugineum HOM05D006959 ORTHO05D008808 1.8e-24 116.7 128 50.0
AL2G37400 Arabidopsis lyrata HOM05D006959 ORTHO05D008808 6.8e-24 114.8 128 50.0
Sp5g32400 Schrenkiella parvula HOM05D006959 ORTHO05D008808 6.8e-24 114.8 127 50.4
AT1G77230 Arabidopsis thaliana HOM05D006959 ORTHO05D008808 2.0e-23 113.2 128 48.4
Actinidia24726 Actinidia chinensis HOM05D006959 ORTHO05D008808 2.6e-23 112.8 96 65.6
Carub.0002s2410 Capsella rubella HOM05D006959 ORTHO05D008808 2.6e-23 112.8 128 49.2
CARHR070700 Cardamine hirsuta HOM05D006959 ORTHO05D008808 7.5e-23 111.3 128 46.9
Prupe.1G487500 Prunus persica HOM05D006959 ORTHO05D008808 2.9e-22 109.4 66 80.3
BcaB02g07099 Brassica carinata HOM05D006959 ORTHO05D008808 4.9e-22 108.6 128 46.1
BcaC08g45484 Brassica carinata HOM05D006959 ORTHO05D008808 4.9e-22 108.6 128 46.1
Lj1g0023549 Lotus japonicus HOM05D006959 ORTHO05D008808 4.9e-22 108.6 121 53.7
RcHm_v2.0_Chr6g0296961 Rosa chinensis HOM05D006959 ORTHO05D008808 4.9e-22 108.6 74 70.3
C06p31380 Brassica napus HOM05D006959 ORTHO05D008808 6.4e-22 108.2 128 46.9
TPR.G879 Trifolium pratense HOM05D006959 ORTHO05D008808 1.9e-21 106.7 68 76.5
BolC6t38274H Brassica oleracea HOM05D006959 ORTHO05D008808 2.4e-21 106.3 128 46.9
A08p07140 Brassica napus HOM05D006959 ORTHO05D008808 5.4e-21 105.1 127 45.7
BraA08t32726Z Brassica rapa HOM05D006959 ORTHO05D008808 5.4e-21 105.1 127 45.7
Ca_12642_v3 Cicer arietinum L. HOM05D006959 ORTHO05D008808 1.2e-20 104.0 127 49.6
Lalb_Chr04g0253591 Lupinus albus HOM05D006959 ORTHO05D008808 1.2e-20 104.0 123 50.4
CSS0019542 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 1.0e-19 100.9 128 50.8
Glyma.14G156700 Glycine max HOM05D006959 ORTHO05D008808 2.3e-19 99.8 181 39.8
Medtr1g029720 Medicago truncatula HOM05D006959 ORTHO05D008808 3.3e-18 95.9 123 47.2
ATR0584G163 Amborella trichopoda HOM05D006959 ORTHO05D008808 1.2e-17 94.0 124 43.5
Sc26g0002850 Simmondsia chinensis HOM05D006959 ORTHO05D008808 6.2e-17 91.7 66 63.6
DCAR_028201 Daucus carota HOM05D006959 ORTHO05D008808 3.4e-15 85.9 129 42.6
SEGI_04582 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 4.3e-10 68.9 68 41.2
SEGI_05118 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 7.3e-10 68.2 68 41.2
CSS0009415 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 1.5e-07 60.5 30 93.3
CSS0036249 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 2.6e-07 59.7 30 93.3
Psat6g040840 Pisum sativum HOM05D006959 ORTHO05D008808 2.9e-06 56.2 67 52.2


User provided reference genes

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