Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27243 Davidia involucrata HOM05D001991 ORTHO05D002030 6.8e-89 330.9 197 100.0
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 6.5e-15 85.1 81 63.0
Dinv41971 Davidia involucrata HOM05D001991 ORTHO05D002030 3.6e-13 79.3 86 55.8
Dinv04017 Davidia involucrata HOM05D000008 ORTHO05D000005 2.6e-11 73.2 45 77.8
GSVIVG01024072001 Vitis vinifera HOM05D001991 ORTHO05D002030 3.3e-11 72.8 72 56.9
Gohir.A04G122600 Gossypium hirsutum HOM05D001991 ORTHO05D002030 1.7e-10 70.5 75 57.3
Aa31LG6G16470 Aethionema arabicum HOM05D001991 ORTHO05D002030 2.2e-10 70.1 83 51.8
CsaV3_2G015760 Cucumis sativus L. HOM05D001991 ORTHO05D002030 3.7e-10 69.3 70 57.1
Lsat_1_v5_gn_4_74740 Lactuca sativa HOM05D001991 ORTHO05D002030 3.7e-10 69.3 73 54.8
Gohir.D04G164600 Gossypium hirsutum HOM05D001991 ORTHO05D002030 4.8e-10 68.9 75 56.0
Lj9P390T58 Lonicera japonica HOM05D001991 ORTHO05D002030 6.3e-10 68.6 70 57.1
Sp7g37080 Schrenkiella parvula HOM05D001991 ORTHO05D002030 6.3e-10 68.6 75 52.0
unitig_21.g20015 Utricularia gibba HOM05D001991 ORTHO05D002030 6.3e-10 68.6 69 58.0
ClCG02G011610 Citrullus lanatus HOM05D001991 ORTHO05D002030 8.2e-10 68.2 80 51.2
MELO3C020790.2 Cucumis melo HOM05D001991 ORTHO05D002030 1.1e-09 67.8 80 51.2
Sed0018167 Sechium edule HOM05D001991 ORTHO05D002030 1.4e-09 67.4 69 58.0
AT4G38710 Arabidopsis thaliana HOM05D001991 ORTHO05D002030 1.8e-09 67.0 93 46.2
Gorai.012G153000 Gossypium raimondii HOM05D001991 ORTHO05D002030 2.4e-09 66.6 75 53.3
Gohir.D12G033600 Gossypium hirsutum HOM05D001991 ORTHO05D002030 3.1e-09 66.2 75 53.3
Gorai.008G034500 Gossypium raimondii HOM05D001991 ORTHO05D002030 3.1e-09 66.2 75 53.3
Lj5P183T88 Lonicera japonica HOM05D001991 ORTHO05D002030 3.1e-09 66.2 70 58.6
Gohir.A12G038700 Gossypium hirsutum HOM05D001991 ORTHO05D002030 4.1e-09 65.9 75 53.3
CARHR294420 Cardamine hirsuta HOM05D001991 ORTHO05D002030 9.1e-09 64.7 68 52.9
Eucgr.I01379 Eucalyptus grandis HOM05D001991 ORTHO05D002030 9.1e-09 64.7 70 58.6
BcaB03g12220 Brassica carinata HOM05D001991 ORTHO05D002030 1.2e-08 64.3 74 52.7
CiPaw.06G124800 Carya illinoinensis HOM05D001991 ORTHO05D002030 1.6e-08 63.9 72 50.0
Duzib248G0809 Durio zibethinus HOM05D001991 ORTHO05D002030 2.0e-08 63.5 75 53.3
Gohir.D02G224800 Gossypium hirsutum HOM05D001991 ORTHO05D002030 2.0e-08 63.5 76 53.9
Gorai.005G252600 Gossypium raimondii HOM05D001991 ORTHO05D002030 2.0e-08 63.5 76 53.9
Nitab4.5_0000283g0030 Nicotiana tabacum HOM05D001991 ORTHO05D002030 2.0e-08 63.5 82 50.0
MD10G1119900 Malus domestica HOM05D001991 ORTHO05D002030 2.6e-08 63.2 69 56.5
Sed0007163 Sechium edule HOM05D001991 ORTHO05D002030 2.6e-08 63.2 81 48.1
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 3.5e-08 62.8 85 43.5
COL.COLO4_17265 Corchorus olitorius HOM05D001991 ORTHO05D002030 4.5e-08 62.4 75 49.3
Gohir.A03G203500 Gossypium hirsutum HOM05D001991 ORTHO05D002030 7.7e-08 61.6 76 52.6
Manes.11G024700 Manihot esculenta HOM05D000008 ORTHO05D000005 7.7e-08 61.6 41 68.3
unitig_578.g16748 Utricularia gibba HOM05D001991 ORTHO05D002030 1.0e-07 61.2 83 49.4
Peaxi162Scf00362g00949 Petunia axillaris HOM05D001991 ORTHO05D002030 1.3e-07 60.8 101 41.6
Phvul.011G033300 Phaseolus vulgaris HOM05D001991 ORTHO05D002030 1.7e-07 60.5 78 48.7
Duzib052G0141 Durio zibethinus HOM05D001991 ORTHO05D002030 2.2e-07 60.1 75 48.0
CANSAT25G2203 Cannabis sativa HOM05D001991 ORTHO05D002030 2.9e-07 59.7 70 52.9
Cc02_g16460 Coffea canephora HOM05D001991 ORTHO05D002030 2.9e-07 59.7 83 44.6
FAN20G2078 Fragaria x ananassa HOM05D001991 ORTHO05D002030 2.9e-07 59.7 73 50.7
MD05G1116800 Malus domestica HOM05D001991 ORTHO05D002030 2.9e-07 59.7 69 52.2
Medtr4g074040 Medicago truncatula HOM05D001991 ORTHO05D002030 2.9e-07 59.7 78 47.4
Nn5g29104 Nelumbo nucifera HOM05D001991 ORTHO05D002030 2.9e-07 59.7 88 44.3
Rhsim11G0188300 Rhododendron simsii HOM05D001991 ORTHO05D002030 2.9e-07 59.7 101 42.6
TWI79G0271 Tripterygium wilfordii HOM05D001991 ORTHO05D002030 2.9e-07 59.7 71 54.9
FvH4_2g01750 Fragaria vesca HOM05D001991 ORTHO05D002030 3.8e-07 59.3 73 50.7
FAN24G0537 Fragaria x ananassa HOM05D001991 ORTHO05D002030 3.8e-07 59.3 73 50.7
Glyma.12G030200 Glycine max HOM05D001991 ORTHO05D002030 3.8e-07 59.3 79 48.1
Ca_03054_v3 Cicer arietinum L. HOM05D001991 ORTHO05D002030 5.0e-07 58.9 77 48.1
Sed0026833 Sechium edule HOM05D001991 ORTHO05D002030 5.0e-07 58.9 69 52.2
Cpa.g.sc37.183 Carica papaya HOM05D001991 ORTHO05D002030 6.5e-07 58.5 69 55.1
vmacro02254 Vaccinium macrocarpon HOM05D001991 ORTHO05D002030 6.5e-07 58.5 83 44.6
HanXRQChr10g0298951 Helianthus annuus HOM05D001991 ORTHO05D002030 8.5e-07 58.2 69 52.2
Oeu042186.2 Olea europaea HOM05D001991 ORTHO05D002030 8.5e-07 58.2 79 46.8
arahy.Tifrunner.gnm1.ann1.CXE5JY Arachis hypogaea HOM05D001991 ORTHO05D002030 1.1e-06 57.8 80 46.2
MSTRG.16883 Avicennia marina HOM05D001991 ORTHO05D002030 1.1e-06 57.8 75 52.0
Hund06409 Selenicereus undatus HOM05D001991 ORTHO05D002030 1.1e-06 57.8 71 50.7
Thhalv10025358m.g Eutrema salsugineum HOM05D001991 ORTHO05D002030 1.5e-06 57.4 75 44.0
FAN27G1115 Fragaria x ananassa HOM05D001991 ORTHO05D002030 1.5e-06 57.4 73 49.3
VMungo1127G1801 Vigna mungo HOM05D001991 ORTHO05D002030 1.5e-06 57.4 79 46.8
FAN15G2134 Fragaria x ananassa HOM05D001991 ORTHO05D002030 1.9e-06 57.0 73 49.3
Psat7g174440 Pisum sativum HOM05D001991 ORTHO05D002030 2.5e-06 56.6 81 46.9
SalBow6G0737 Salvia bowleyana HOM05D001991 ORTHO05D002030 2.5e-06 56.6 68 50.0
TPR.G19905 Trifolium pratense HOM05D001991 ORTHO05D002030 2.5e-06 56.6 79 45.6
arahy.Tifrunner.gnm1.ann1.H3HBDV Arachis hypogaea HOM05D001991 ORTHO05D002030 3.2e-06 56.2 80 45.0
TWI75G0461 Tripterygium wilfordii HOM05D001991 ORTHO05D002030 3.2e-06 56.2 70 51.4
CiPaw.05G077800 Carya illinoinensis HOM05D001991 ORTHO05D002030 4.2e-06 55.8 73 45.2
Lj3g0017262 Lotus japonicus HOM05D001991 ORTHO05D002030 4.2e-06 55.8 71 49.3
Manes.11G090500 Manihot esculenta HOM05D001991 ORTHO05D002030 7.2e-06 55.1 70 48.6
Prupe.8G161300 Prunus persica HOM05D001991 ORTHO05D002030 7.2e-06 55.1 70 51.4
SalBow3G1371 Salvia bowleyana HOM05D001991 ORTHO05D002030 7.2e-06 55.1 68 48.5
Sed0008982 Sechium edule HOM05D001991 ORTHO05D002030 7.2e-06 55.1 68 52.9
Sc08g0003150 Simmondsia chinensis HOM05D001991 ORTHO05D002030 7.2e-06 55.1 70 51.4


User provided reference genes

Program Settings