Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27233 Davidia involucrata HOM05D012872 ORTHO05D005672 1.2e-30 136.0 72 100.0
unitig_736.g22466 Utricularia gibba HOM05D005458 ORTHO05D005672 1.5e-09 65.9 65 61.5
ClCG06G007830 Citrullus lanatus HOM05D005458 ORTHO05D005672 3.7e-08 61.2 63 55.6
MELO3C020447.2 Cucumis melo HOM05D005458 ORTHO05D005672 3.7e-08 61.2 42 76.2
Dinv27235 Davidia involucrata HOM05D005458 ORTHO05D005672 3.7e-08 61.2 42 76.2
Thhalv10002785m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 1.1e-07 59.7 40 80.0
Carub.0003s2440 Capsella rubella HOM05D005458 ORTHO05D005672 3.1e-07 58.2 42 76.2
CsaV3_2G011550 Cucumis sativus L. HOM05D005458 ORTHO05D005672 3.1e-07 58.2 45 68.9
Potri.017G055501 Populus trichocarpa HOM05D005458 ORTHO05D005672 3.1e-07 58.2 45 68.9
AL3G39170 Arabidopsis lyrata HOM05D005458 ORTHO05D005672 4.1e-07 57.8 40 80.0
CARHR100100 Cardamine hirsuta HOM05D005458 ORTHO05D005672 6.9e-07 57.0 40 80.0
Dinv02451 Davidia involucrata HOM05D012872 ORTHO05D005672 6.9e-07 57.0 30 96.7
Dinv09722 Davidia involucrata HOM05D012872 ORTHO05D005672 6.9e-07 57.0 30 96.7
Dinv15330 Davidia involucrata HOM05D012872 ORTHO05D005672 6.9e-07 57.0 30 96.7
Dinv18792 Davidia involucrata HOM05D012872 ORTHO05D005672 6.9e-07 57.0 30 96.7
Dinv18799 Davidia involucrata HOM05D012872 ORTHO05D005672 6.9e-07 57.0 30 96.7
Aa31LG9G4030 Aethionema arabicum HOM05D005458 ORTHO05D005672 9.1e-07 56.6 46 67.4
Dinv15350 Davidia involucrata HOM05D012872 ORTHO05D005672 9.1e-07 56.6 31 93.5
ECA248G3568 Erigeron canadensis HOM05D000609 ORTHO05D000462 1.2e-06 56.2 45 68.9
TWI75G0430 Tripterygium wilfordii HOM05D005458 ORTHO05D005672 1.5e-06 55.8 45 66.7
Dinv03928 Davidia involucrata HOM05D012872 ORTHO05D005672 2.6e-06 55.1 30 93.3
AT3G24100 Arabidopsis thaliana HOM05D005458 ORTHO05D005672 3.4e-06 54.7 42 71.4
Glyma.08G351700 Glycine max HOM05D005458 ORTHO05D005672 3.4e-06 54.7 45 66.7
PGR142G1434 Punica granatum HOM05D005458 ORTHO05D005672 3.4e-06 54.7 40 75.0
Gohir.D07G207100 Gossypium hirsutum HOM05D005458 ORTHO05D005672 4.5e-06 54.3 41 78.0
Gorai.001G233500 Gossypium raimondii HOM05D005458 ORTHO05D005672 4.5e-06 54.3 41 78.0
BcaB04g17662 Brassica carinata HOM05D005458 ORTHO05D005672 5.9e-06 53.9 42 71.4
CAN.G1635.9 Capsicum annuum HOM05D005458 ORTHO05D005672 5.9e-06 53.9 51 58.8
COL.COLO4_12105 Corchorus olitorius HOM05D001094 ORTHO05D001050 5.9e-06 53.9 42 73.8
BcaC02g09406 Brassica carinata HOM05D016886 ORTHO05D005672 7.7e-06 53.5 42 71.4
A04p08570 Brassica napus HOM05D005458 ORTHO05D005672 7.7e-06 53.5 42 71.4
BolC4t25811H Brassica oleracea HOM05D005458 ORTHO05D005672 7.7e-06 53.5 42 71.4
BraA04t16551Z Brassica rapa HOM05D005458 ORTHO05D005672 7.7e-06 53.5 42 71.4
Lsat_1_v5_gn_6_60280 Lactuca sativa HOM05D005458 ORTHO05D005672 7.7e-06 53.5 42 69.0
Rhsim02G0057300 Rhododendron simsii HOM05D005458 ORTHO05D005672 7.7e-06 53.5 42 69.0
Sp7g11280 Schrenkiella parvula HOM05D017066 ORTHO05D005672 7.7e-06 53.5 42 71.4


User provided reference genes

Program Settings