Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27178 Davidia involucrata HOM05D007138 ORTHO05D009148 6.4e-293 1010.0 502 100.0
Hma1.2p1_1457F.1_g284650 Hydrangea macrophylla HOM05D007138 ORTHO05D009148 1.1e-106 391.3 358 61.5
Haze_11677 Corylus avellana HOM05D007138 ORTHO05D009148 1.2e-97 361.3 487 46.6
QL06p027005 Quercus lobata HOM05D007138 ORTHO05D009148 1.4e-90 337.8 498 46.0
CiPaw.01G114100 Carya illinoinensis HOM05D007138 ORTHO05D009148 4.6e-89 332.8 493 46.0
TAR365G0398 Trochodendron aralioides HOM05D007138 ORTHO05D009148 3.0e-88 330.1 507 46.2
GSVIVG01031579001 Vitis vinifera HOM05D007138 ORTHO05D009148 1.6e-86 324.3 478 44.6
Cfa008656 Carpinus fangiana HOM05D007138 ORTHO05D009148 3.2e-82 310.1 486 42.8
Manes.01G054400 Manihot esculenta HOM05D007138 ORTHO05D009148 1.6e-78 297.7 489 41.3
Prupe.1G169400 Prunus persica HOM05D007138 ORTHO05D009148 4.7e-78 296.2 552 39.9
FvH4_4g12980 Fragaria vesca HOM05D007138 ORTHO05D009148 1.1e-77 295.0 500 42.8
FAN12G4162 Fragaria x ananassa HOM05D007138 ORTHO05D009148 3.1e-77 293.5 500 42.4
Potri.002G236300 Populus trichocarpa HOM05D007138 ORTHO05D009148 1.5e-76 291.2 443 44.0
Duzib151G0530 Durio zibethinus HOM05D007138 ORTHO05D009148 5.8e-76 289.3 467 41.8
FAN07G0102 Fragaria x ananassa HOM05D007138 ORTHO05D009148 2.9e-75 287.0 502 41.8
Nn1g08135 Nelumbo nucifera HOM05D007138 ORTHO05D009148 6.4e-75 285.8 481 40.5
Cc03_g09210 Coffea canephora HOM05D007138 ORTHO05D009148 5.4e-74 282.7 521 39.7
Atru.chr3.1784 Acer truncatum HOM05D007138 ORTHO05D009148 1.2e-73 281.6 392 45.9
MD04G1019900 Malus domestica HOM05D007138 ORTHO05D009148 1.6e-73 281.2 510 40.2
Thecc.04G192200 Theobroma cacao HOM05D007138 ORTHO05D009148 1.0e-72 278.5 500 40.8
Sabra02G0180000 Salix brachista HOM05D007138 ORTHO05D009148 1.8e-69 267.7 439 41.2
RcHm_v2.0_Chr4g0412661 Rosa chinensis HOM05D007138 ORTHO05D009148 1.5e-68 264.6 500 39.6
Gorai.006G224900 Gossypium raimondii HOM05D007138 ORTHO05D009148 7.1e-66 255.8 498 38.8
Gohir.D09G201200 Gossypium hirsutum HOM05D007138 ORTHO05D009148 1.6e-65 254.6 498 38.8
Hund25334 Selenicereus undatus HOM05D007138 ORTHO05D009148 4.6e-65 253.1 457 38.9
Gohir.A09G207700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 7.8e-65 252.3 506 37.7
Ciclev10004866m.g Citrus clementina HOM05D007138 ORTHO05D009148 3.9e-64 250.0 438 40.9
Lalb_Chr12g0205841 Lupinus albus HOM05D007138 ORTHO05D009148 8.7e-64 248.8 417 40.3
TWI53G1035 Tripterygium wilfordii HOM05D007138 ORTHO05D009148 1.9e-63 247.7 402 38.3
Lalb_Chr13g0294671 Lupinus albus HOM05D007138 ORTHO05D009148 8.1e-62 242.3 452 37.8
CANSAT78G1621 Cannabis sativa HOM05D007138 ORTHO05D009148 6.9e-61 239.2 510 36.5
Sc13g0000510 Simmondsia chinensis HOM05D007138 ORTHO05D009148 9.0e-61 238.8 514 33.1
Lsat_1_v5_gn_6_59601 Lactuca sativa HOM05D007138 ORTHO05D009148 4.5e-60 236.5 457 37.4
AUR62020894 Chenopodium quinoa HOM05D007138 ORTHO05D009148 1.3e-59 235.0 457 36.3
Glyma.05G150500 Glycine max HOM05D007138 ORTHO05D009148 7.1e-58 229.2 363 41.0
Aqoxy2G03906 Aquilegia oxysepala HOM05D007138 ORTHO05D009148 4.6e-57 226.5 479 36.5
Glyma.08G107400 Glycine max HOM05D007138 ORTHO05D009148 1.3e-56 224.9 451 37.9
MSTRG.9782 Avicennia marina HOM05D007138 ORTHO05D009148 1.8e-56 224.6 524 35.7
Cpa.g.sc157.22 Carica papaya HOM05D007138 ORTHO05D009148 3.0e-56 223.8 465 37.8
AUR62018524 Chenopodium quinoa HOM05D007138 ORTHO05D009148 8.7e-56 222.2 471 36.1
Eucgr.H02635 Eucalyptus grandis HOM05D007138 ORTHO05D009148 1.5e-55 221.5 359 40.1
Oeu034315.1 Olea europaea HOM05D007138 ORTHO05D009148 4.3e-55 219.9 505 35.4
SalBow2G2858 Salvia bowleyana HOM05D007138 ORTHO05D009148 1.6e-54 218.0 484 35.1
Psat0s4823g0040 Pisum sativum HOM05D007138 ORTHO05D009148 1.4e-53 214.9 370 36.5
arahy.Tifrunner.gnm1.ann1.JT7ZMS Arachis hypogaea HOM05D007138 ORTHO05D009148 3.1e-53 213.8 390 36.4
Nitab4.5_0000037g0170 Nicotiana tabacum HOM05D007138 ORTHO05D009148 5.3e-53 213.0 636 32.4
EL10Ac3g07428 Beta vulgaris HOM05D007138 ORTHO05D009148 6.9e-53 212.6 503 34.6
ECA233G0560 Erigeron canadensis HOM05D007138 ORTHO05D009148 9.9e-52 208.8 480 34.2
TPR.G11960 Trifolium pratense HOM05D000150 ORTHO05D000108 1.3e-51 208.4 403 38.0
Lj4g0024791 Lotus japonicus HOM05D007138 ORTHO05D009148 2.9e-51 207.2 492 35.0
arahy.Tifrunner.gnm1.ann1.KQUG48 Arachis hypogaea HOM05D007138 ORTHO05D009148 8.4e-51 205.7 493 31.6
Ca_18004_v3 Cicer arietinum L. HOM05D007138 ORTHO05D009148 2.5e-50 204.1 453 33.1
PGSC0003DMG400021869 Solanum tuberosum HOM05D007138 ORTHO05D009148 2.5e-50 204.1 631 32.6
SalBow2G0985 Salvia bowleyana HOM05D007138 ORTHO05D009148 3.2e-50 203.8 477 34.6
Peaxi162Scf00286g01047 Petunia axillaris HOM05D007138 ORTHO05D009148 9.3e-50 202.2 646 31.9
Solyc09g092510.3 Solanum lycopersicum HOM05D007138 ORTHO05D009148 2.1e-49 201.1 633 32.9
Migut.G00946 Erythranthe guttata HOM05D007138 ORTHO05D009148 2.7e-49 200.7 482 33.2
Gorai.005G025100 Gossypium raimondii HOM05D007138 ORTHO05D009148 2.7e-49 200.7 618 30.9
Gohir.A02G017700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 4.6e-49 199.9 659 30.2
Medtr8g083310 Medicago truncatula HOM05D007138 ORTHO05D009148 6.7e-48 196.1 401 35.9
Sopen09g035410 Solanum pennellii HOM05D007138 ORTHO05D009148 8.7e-48 195.7 633 32.1
Gohir.D02G019900 Gossypium hirsutum HOM05D007138 ORTHO05D009148 2.8e-46 190.7 160 61.9
HanXRQChr02g0058451 Helianthus annuus HOM05D007138 ORTHO05D009148 1.8e-45 188.0 384 36.7
Ah.04g149560 Amaranthus hybridus HOM05D001269 ORTHO05D001083 3.1e-45 187.2 465 34.0
ClCG06G003170 Citrullus lanatus HOM05D007138 ORTHO05D009148 2.6e-44 184.1 512 32.6
CARHR099730 Cardamine hirsuta HOM05D007138 ORTHO05D009148 3.4e-44 183.7 433 33.5
CsaV3_6G009270 Cucumis sativus L. HOM05D007138 ORTHO05D009148 3.4e-44 183.7 406 35.2
Oeu056444.1 Olea europaea HOM05D007138 ORTHO05D009148 1.3e-43 181.8 451 34.4
MBI11_g07400_MAGBIO Magnolia biondii HOM05D007138 ORTHO05D009148 4.9e-43 179.9 251 43.8
Sed0014888 Sechium edule HOM05D007138 ORTHO05D009148 2.1e-41 174.5 169 54.4
PGR083G1257 Punica granatum HOM05D007138 ORTHO05D009148 4.6e-41 173.3 355 35.2
Sp3g21450 Schrenkiella parvula HOM05D007138 ORTHO05D009148 4.6e-41 173.3 376 35.4
Phvul.003G291400 Phaseolus vulgaris HOM05D007138 ORTHO05D009148 2.3e-40 171.0 252 44.4
Lsat_1_v5_gn_6_58941 Lactuca sativa HOM05D007138 ORTHO05D009148 1.5e-39 168.3 436 32.8
AL3G38640 Arabidopsis lyrata HOM05D007138 ORTHO05D009148 1.9e-39 167.9 372 35.2
THA.LOC104804782 Tarenaya hassleriana HOM05D007138 ORTHO05D009148 1.9e-39 167.9 333 37.8
VMungo0251G1281 Vigna mungo HOM05D007138 ORTHO05D009148 5.7e-39 166.4 244 44.7
BcaB06g26533 Brassica carinata HOM05D007138 ORTHO05D009148 3.7e-38 163.7 352 32.4
Carub.0003s2404 Capsella rubella HOM05D007138 ORTHO05D009148 3.7e-38 163.7 432 31.9
Thhalv10002448m.g Eutrema salsugineum HOM05D007138 ORTHO05D009148 8.2e-38 162.5 539 28.4
A07p08650 Brassica napus HOM05D007138 ORTHO05D009148 2.4e-37 161.0 367 34.1
BraA07t28655Z Brassica rapa HOM05D007138 ORTHO05D009148 2.4e-37 161.0 367 34.1
MELO3C021153.2 Cucumis melo HOM05D007138 ORTHO05D009148 1.5e-36 158.3 163 54.6
AT3G23740 Arabidopsis thaliana HOM05D007138 ORTHO05D009148 4.5e-36 156.8 366 35.2
BcaC06g35563 Brassica carinata HOM05D007138 ORTHO05D009148 1.0e-35 155.6 366 32.5
Nn1g02395 Nelumbo nucifera HOM05D007138 ORTHO05D009148 2.9e-35 154.1 302 35.1
C07p13480 Brassica napus HOM05D007138 ORTHO05D009148 5.5e-34 149.8 366 32.5
BolC7t41843H Brassica oleracea HOM05D007138 ORTHO05D009148 5.5e-34 149.8 366 32.5
unitig_747.g21666 Utricularia gibba HOM05D007138 ORTHO05D009148 1.4e-29 135.2 347 31.4
Zm00001eb334100 Zea mays HOM05D007138 ORTHO05D009148 1.4e-26 125.2 136 47.8
Aa31LG8G10280 Aethionema arabicum HOM05D007138 ORTHO05D009148 5.5e-26 123.2 275 34.5
Os01g0101800 Oryza sativa ssp. japonica HOM05D007138 ORTHO05D009148 1.8e-24 118.2 138 47.8
Zm00001eb127090 Zea mays HOM05D007138 ORTHO05D009148 1.1e-21 109.0 107 51.4
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 3.1e-21 107.5 141 39.7
CDE09G0581 Ceratophyllum demersum HOM05D007138 ORTHO05D009148 3.5e-20 104.0 388 27.6
ATR0561G013 Amborella trichopoda HOM05D007138 ORTHO05D009148 8.8e-16 89.4 138 38.4
Atru.chr3.1785 Acer truncatum HOM05D007138 ORTHO05D009148 1.0e-11 75.9 115 40.9
Ciclev10006158m.g Citrus clementina HOM05D007138 ORTHO05D009148 5.5e-10 70.1 169 35.5
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 4.4e-07 60.5 65 41.5
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 3.7e-06 57.4 110 33.6
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 4.8e-06 57.0 117 28.2


User provided reference genes

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