Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 4.7e-83 311.2 167 100.0
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 1.4e-50 203.4 143 74.8
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 3.1e-50 202.2 144 72.9
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 7.6e-49 197.6 153 66.0
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 7.6e-49 197.6 153 66.0
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 1.0e-48 197.2 143 74.1
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.0e-48 197.2 143 71.3
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.7e-48 196.4 153 66.0
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 3.8e-48 195.3 143 72.7
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 6.5e-48 194.5 143 69.2
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 1.4e-47 193.4 145 69.7
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 1.4e-47 193.4 149 69.8
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 1.4e-47 193.4 144 68.8
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 1.9e-47 193.0 149 69.8
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 2.5e-47 192.6 143 71.3
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 3.2e-47 192.2 132 76.5
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 4.2e-47 191.8 143 67.8
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 5.5e-47 191.4 143 72.0
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 1.3e-45 186.8 144 68.8
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 6.7e-45 184.5 143 66.4
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 1.1e-44 183.7 144 67.4
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 1.5e-44 183.3 143 67.1
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 1.5e-44 183.3 143 68.5
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.5e-44 183.3 144 67.4
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 1.9e-44 183.0 143 68.5
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 7.4e-44 181.0 143 66.4
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 6.3e-43 177.9 144 65.3
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.1e-42 177.2 155 64.5
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.1e-42 177.2 150 67.3
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 1.5e-41 173.3 144 62.5
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 7.6e-41 171.0 143 62.2
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 2.2e-40 169.5 143 62.9
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 3.8e-40 168.7 143 63.6
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 5.0e-40 168.3 144 62.5
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 6.5e-40 167.9 143 63.6
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 2.5e-39 166.0 144 61.8
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 2.5e-39 166.0 144 61.8
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 3.2e-39 165.6 142 62.0
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 4.2e-39 165.2 143 60.8
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 7.2e-39 164.5 143 60.8
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 9.3e-39 164.1 143 60.8
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 2.1e-38 162.9 144 62.5
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 1.0e-37 160.6 141 61.7
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.4e-37 160.2 143 58.7
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 1.8e-37 159.8 142 60.6
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 6.7e-37 157.9 143 58.0
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.1e-36 157.1 153 58.2
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 5.7e-36 154.8 143 57.3
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 5.7e-36 154.8 142 57.7
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 3.7e-35 152.1 142 57.0
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 4.8e-35 151.8 141 56.0
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 5.3e-34 148.3 116 67.2
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 1.0e-32 144.1 137 60.6
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 2.9e-32 142.5 144 57.6
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 6.5e-32 141.4 144 56.9
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 3.2e-31 139.0 144 56.9
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 2.1e-30 136.3 94 74.5
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 2.7e-30 136.0 124 55.6
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 3.6e-30 135.6 145 56.6
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 1.0e-29 134.0 129 60.5
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 3.3e-28 129.0 102 70.6
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 2.8e-27 125.9 107 61.7
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.1e-26 122.1 141 46.8
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 7.2e-23 111.3 103 58.3
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 3.6e-22 109.0 105 55.2
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 3.9e-21 105.5 137 43.1
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 7.0e-18 94.7 124 46.0
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 4.5e-17 92.0 124 39.5
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.9e-15 86.7 64 71.9
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 1.2e-14 84.0 119 40.3
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.6e-14 83.6 142 36.6
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 6.1e-14 81.6 68 63.2
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.6e-12 76.3 87 46.0
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 4.4e-12 75.5 105 40.0
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 4.4e-12 75.5 105 40.0
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.8e-11 72.8 105 41.9
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 7.0e-10 68.2 54 68.5


User provided reference genes

Program Settings