Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 5.3e-151 537.7 282 100.0
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.8e-125 451.8 284 83.8
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.8e-125 451.8 284 83.8
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.5e-123 445.3 284 81.7
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.3e-121 438.3 284 79.6
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 6.9e-119 431.0 267 82.8
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 2.9e-117 425.6 281 78.3
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 2.5e-116 422.5 266 80.5
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 3.2e-116 422.2 275 77.8
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 4.2e-116 421.8 325 71.1
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 7.2e-116 421.0 271 78.6
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 9.4e-116 420.6 266 81.2
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 9.4e-116 420.6 280 77.5
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.2e-115 420.2 280 77.9
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 2.1e-115 419.5 282 77.0
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 3.9e-114 415.2 282 77.3
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.9e-114 415.2 274 78.1
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 8.8e-114 414.1 280 76.4
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.1e-113 413.7 274 78.1
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.5e-113 413.3 280 76.4
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.0e-113 412.9 274 77.0
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 3.3e-113 412.1 282 76.2
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 7.4e-113 411.0 273 75.8
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 9.7e-113 410.6 276 77.2
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 2.8e-112 409.1 274 76.6
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.8e-112 408.3 274 77.0
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 4.8e-112 408.3 266 79.3
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 4.8e-112 408.3 263 78.7
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 1.1e-111 407.1 274 76.3
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 4.1e-111 405.2 263 77.9
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 9.1e-111 404.1 268 77.2
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.2e-110 403.7 275 75.3
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.5e-110 403.3 268 75.7
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 2.0e-110 402.9 240 86.7
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.3e-109 400.2 274 74.8
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 1.3e-109 400.2 268 75.7
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 2.2e-109 399.4 269 74.7
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 2.9e-109 399.1 277 72.6
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 2.9e-109 399.1 271 73.8
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 5.0e-109 398.3 269 75.1
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 6.5e-109 397.9 280 73.9
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.4e-108 396.7 277 72.6
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.4e-108 396.7 272 76.5
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 3.2e-108 395.6 268 73.5
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 4.2e-108 395.2 266 76.3
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 7.2e-108 394.4 277 71.5
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 2.7e-107 392.5 277 71.5
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 3.6e-107 392.1 272 71.7
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 4.7e-107 391.7 277 71.1
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 2.3e-106 389.4 269 72.9
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.1e-105 387.1 269 72.5
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.6e-105 386.0 269 72.1
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 4.4e-105 385.2 266 74.1
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.3e-104 383.6 269 72.1
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.3e-104 383.6 269 72.1
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.3e-104 383.6 266 73.7
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 1.3e-104 383.6 241 83.4
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.8e-104 382.5 279 72.8
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 3.7e-104 382.1 265 74.3
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 6.3e-104 381.3 270 73.3
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.8e-103 379.8 266 72.9
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 1.2e-102 377.1 263 75.7
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 2.0e-102 376.3 286 70.6
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 4.5e-102 375.2 269 73.6
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 7.7e-102 374.4 280 70.7
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.7e-101 373.2 263 72.2
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.9e-101 372.5 268 72.4
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 8.5e-101 370.9 284 70.1
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 1.1e-100 370.5 286 69.2
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.9e-100 369.8 281 69.8
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 2.5e-100 369.4 282 69.1
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 3.2e-100 369.0 273 71.4
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 4.2e-100 368.6 268 71.6
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 1.6e-99 366.7 269 72.5
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 2.1e-99 366.3 268 70.1
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 2.7e-99 365.9 273 71.1
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 2.7e-99 365.9 267 71.9
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 2.7e-99 365.9 272 69.9
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.0e-98 364.0 287 67.2
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.4e-98 363.6 272 67.6
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 5.7e-97 358.2 266 69.2
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.4e-95 353.6 278 66.9
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.2e-94 350.5 234 75.6
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 3.5e-94 349.0 269 68.8
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 5.9e-94 348.2 283 66.1
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 8.5e-93 344.4 266 68.8
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.5e-92 343.6 225 78.7
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 2.5e-92 342.8 224 79.0
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 4.2e-92 342.0 292 64.4
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 9.4e-92 340.9 266 67.7
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 3.0e-90 335.9 240 72.9
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.5e-89 333.6 284 65.1
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 2.6e-89 332.8 272 62.9
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.4e-89 332.0 237 73.8
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 7.5e-89 331.3 266 61.7
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 3.7e-88 328.9 266 60.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 1.2e-86 323.9 266 63.5
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.0e-85 320.9 257 61.5
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 9.4e-84 314.3 234 68.8
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.4e-82 310.5 392 46.4
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.0e-82 309.3 265 61.9
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 6.4e-72 275.0 149 96.0
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 5.9e-70 268.5 268 54.5
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.9e-68 263.5 236 60.6
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 2.0e-65 253.4 254 53.9
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.7e-56 223.8 196 63.8
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-56 222.6 153 72.5
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 8.6e-53 211.5 183 66.7
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 2.5e-52 209.9 158 68.4
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 3.3e-52 209.5 220 54.5
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 4.1e-47 192.6 215 51.6
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 5.2e-42 175.6 135 71.1
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.4e-41 172.6 120 75.8
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 3.8e-40 169.5 142 54.9
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.5e-33 147.5 136 61.8
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 1.4e-31 141.0 119 65.5
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 1.9e-31 140.6 214 44.4
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.3e-29 134.4 133 61.7
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.9e-24 115.9 77 77.9
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 4.6e-22 109.4 248 34.3
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.3e-20 103.2 80 70.0
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.5e-12 77.8 108 44.4
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 4.1e-10 69.7 46 67.4


User provided reference genes

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