Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 8.1e-39 163.3 85 100.0
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 3.3e-32 141.4 85 84.7
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.3e-31 139.4 85 84.7
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.8e-31 138.3 85 84.7
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.4e-30 136.0 85 83.5
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.2e-28 128.6 84 75.0
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.9e-27 125.6 85 77.6
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 7.1e-27 123.6 92 71.7
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 7.1e-27 123.6 99 68.7
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.6e-23 112.5 87 67.8
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 3.4e-21 104.8 89 60.7
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 1.3e-20 102.8 88 59.1
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.7e-20 102.4 87 58.6
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 5.5e-19 97.4 90 56.7
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 9.3e-19 96.7 86 59.3
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.6e-18 95.9 91 63.7
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 2.1e-18 95.5 91 63.7
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 2.3e-17 92.0 91 61.5
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-17 91.7 87 59.8
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-17 91.7 87 59.8
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-17 91.7 87 59.8
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-17 91.7 87 59.8
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-17 91.7 87 59.8
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-17 91.7 87 59.8
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-17 91.7 87 59.8
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-17 91.7 87 59.8
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 8.7e-17 90.1 85 60.0
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 4.3e-16 87.8 85 57.6
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 7.4e-16 87.0 87 59.8
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 9.7e-16 86.7 90 54.4
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.3e-15 86.3 90 57.8
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 2.2e-15 85.5 85 55.3
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 2.2e-15 85.5 89 52.8
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 2.2e-15 85.5 90 54.4
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 3.7e-15 84.7 91 52.7
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 6.3e-15 84.0 89 51.7
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 8.2e-15 83.6 92 52.2
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 1.4e-14 82.8 111 46.8
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 2.4e-14 82.0 87 56.3
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 2.4e-14 82.0 91 57.1
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 2.4e-14 82.0 91 57.1
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 3.1e-14 81.6 87 56.3
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 3.1e-14 81.6 87 56.3
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 3.1e-14 81.6 89 55.1
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 4.1e-14 81.3 82 48.8
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 5.3e-14 80.9 91 53.8
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 5.3e-14 80.9 87 56.3
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 6.9e-14 80.5 87 56.3
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 9.0e-14 80.1 82 50.0
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 9.0e-14 80.1 86 52.3
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 9.0e-14 80.1 86 52.3
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 1.2e-13 79.7 86 52.3
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 1.5e-13 79.3 89 51.7
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 1.5e-13 79.3 111 45.9
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 3.4e-13 78.2 73 50.7
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.4e-13 78.2 82 50.0
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 3.4e-13 78.2 87 50.6
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 4.5e-13 77.8 82 50.0
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 4.5e-13 77.8 73 53.4
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 5.9e-13 77.4 65 61.5
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 1.7e-12 75.9 111 44.1
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 1.7e-12 75.9 111 44.1
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 1.7e-12 75.9 111 44.1
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 6.5e-12 73.9 112 44.6
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 6.5e-12 73.9 112 44.6
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 1.1e-11 73.2 87 49.4
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 7.2e-11 70.5 89 52.8
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 9.4e-11 70.1 85 47.1
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 2.1e-10 68.9 85 47.1
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 2.1e-10 68.9 85 47.1
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 2.1e-10 68.9 84 47.6
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 2.7e-10 68.6 94 45.7
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 4.6e-10 67.8 85 45.9
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 6.1e-10 67.4 74 51.4
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 1.0e-09 66.6 111 40.5
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 1.0e-09 66.6 124 34.7
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 1.0e-09 66.6 89 48.3
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 1.4e-09 66.2 74 50.0
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 1.8e-09 65.9 122 38.5
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 1.8e-09 65.9 103 43.7
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 3.9e-09 64.7 89 48.3
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 5.1e-09 64.3 111 40.5
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 6.7e-09 63.9 88 47.7
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 6.7e-09 63.9 84 46.4
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 6.7e-09 63.9 84 44.0
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-08 63.2 111 39.6
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-08 63.2 73 49.3
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 1.1e-08 63.2 85 45.9
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 1.5e-08 62.8 88 47.7
Sopen12g032850 Solanum pennellii HOM05D005842 ORTHO05D007077 1.9e-08 62.4 79 45.6
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.5e-08 62.0 88 47.7
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 2.5e-08 62.0 111 38.7
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 2.5e-08 62.0 83 45.8
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 4.3e-08 61.2 111 39.6
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.3e-08 61.2 89 43.8
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.3e-08 61.2 89 43.8
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 5.7e-08 60.8 86 41.9
Solyc12g097050.2 Solanum lycopersicum HOM05D005842 ORTHO05D007077 5.7e-08 60.8 79 44.3
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 7.4e-08 60.5 85 47.1
PGSC0003DMG400008623 Solanum tuberosum HOM05D005842 ORTHO05D007077 7.4e-08 60.5 79 45.6
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 9.7e-08 60.1 111 38.7
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 9.7e-08 60.1 112 39.3
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 9.7e-08 60.1 112 39.3
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 9.7e-08 60.1 112 39.3
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 1.3e-07 59.7 109 37.6
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 2.8e-07 58.5 73 43.8
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 6.3e-07 57.4 143 34.3
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 8.2e-07 57.0 101 39.6
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 1.1e-06 56.6 103 36.9
C08p07940 Brassica napus HOM05D005842 ORTHO05D007077 2.4e-06 55.5 46 65.2
Eucgr.F02549 Eucalyptus grandis HOM05D008630 ORTHO05D010727 2.4e-06 55.5 78 43.6
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 2.4e-06 55.5 62 53.2
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 3.1e-06 55.1 109 36.7
THA.LOC104810501 Tarenaya hassleriana HOM05D008630 ORTHO05D010727 3.1e-06 55.1 85 43.5
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 4.1e-06 54.7 91 41.8
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 4.1e-06 54.7 91 41.8
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 4.1e-06 54.7 91 41.8
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 4.1e-06 54.7 91 41.8
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 4.1e-06 54.7 111 36.9
Medtr1g045950 Medicago truncatula HOM05D005842 ORTHO05D007077 4.1e-06 54.7 37 64.9
TWI18G0017 Tripterygium wilfordii HOM05D008630 ORTHO05D010727 4.1e-06 54.7 76 46.1
Aqoxy7G02083 Aquilegia oxysepala HOM05D008630 ORTHO05D010727 6.9e-06 53.9 29 82.8
Cpa.g.sc336.6 Carica papaya HOM05D008630 ORTHO05D010727 9.1e-06 53.5 75 40.0
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 9.1e-06 53.5 96 35.4


User provided reference genes

Program Settings