Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 1.1e-141 506.5 250 100.0
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.8e-115 419.5 252 81.7
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 7.3e-112 407.5 255 79.6
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.4e-110 403.3 224 86.2
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.8e-110 402.9 251 80.5
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 5.2e-110 401.4 224 85.7
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.7e-108 396.4 231 83.1
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 4.9e-108 394.8 245 80.4
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 4.9e-108 394.8 248 77.8
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.9e-107 392.9 241 81.7
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 4.1e-107 391.7 253 79.4
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 5.4e-107 391.3 251 76.1
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 9.2e-107 390.6 255 75.3
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 9.2e-107 390.6 251 76.9
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.0e-105 387.1 239 77.4
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 3.0e-105 385.6 246 75.2
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 3.0e-105 385.6 228 80.7
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 3.9e-105 385.2 239 77.0
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 3.9e-105 385.2 250 75.6
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 6.6e-105 384.4 247 74.9
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 6.6e-105 384.4 251 76.1
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 1.9e-104 382.9 228 80.3
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 2.5e-104 382.5 248 77.4
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 2.5e-104 382.5 251 76.5
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 2.5e-104 382.5 253 72.7
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 3.3e-104 382.1 246 74.4
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 3.3e-104 382.1 241 77.2
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 4.3e-104 381.7 249 75.9
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 5.6e-104 381.3 248 75.0
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.2e-103 380.2 249 73.1
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 3.6e-103 378.6 250 73.6
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 8.1e-103 377.5 242 75.6
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 2.3e-102 375.9 253 71.5
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 5.2e-102 374.8 234 76.5
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 8.9e-102 374.0 246 74.0
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.5e-101 373.2 258 73.6
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 3.4e-101 372.1 249 73.5
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 4.4e-101 371.7 249 73.5
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 5.8e-101 371.3 217 81.6
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 7.5e-101 370.9 225 78.2
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.7e-100 369.8 217 79.7
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.9e-100 369.0 234 76.5
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 1.1e-99 367.1 249 71.1
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.9e-99 366.3 340 59.7
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 4.1e-99 365.2 250 71.2
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 7.1e-99 364.4 212 82.1
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.6e-98 363.2 223 76.2
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 2.1e-98 362.8 250 70.0
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 3.5e-98 362.1 249 70.7
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 4.6e-98 361.7 244 73.8
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 6.0e-98 361.3 257 68.9
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 7.8e-98 360.9 250 71.2
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 7.8e-98 360.9 252 70.2
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.7e-97 359.8 244 70.9
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.7e-97 359.8 250 70.8
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 5.1e-97 358.2 247 70.0
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.9e-96 356.3 250 70.0
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 1.9e-96 356.3 215 78.6
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 4.3e-96 355.1 239 71.5
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 5.6e-96 354.8 238 71.8
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.3e-96 354.4 252 71.0
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.6e-95 352.1 271 66.4
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 3.6e-95 352.1 250 68.0
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 4.7e-95 351.7 237 73.0
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 6.2e-95 351.3 248 69.0
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 8.1e-95 350.9 225 76.9
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 3.1e-94 349.0 251 66.1
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 4.0e-94 348.6 245 68.6
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 4.0e-94 348.6 244 66.4
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 5.2e-94 348.2 236 69.5
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 8.9e-94 347.4 251 69.7
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 1.5e-93 346.7 204 79.4
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 3.4e-93 345.5 241 66.0
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 7.6e-93 344.4 244 66.4
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 7.6e-93 344.4 246 65.9
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.3e-92 343.6 245 65.7
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.7e-92 343.2 237 65.8
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 2.9e-92 342.4 252 63.5
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 2.9e-92 342.4 245 66.1
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 2.9e-92 342.4 221 70.1
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 3.8e-92 342.0 246 65.0
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 4.9e-92 341.7 252 64.7
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 4.9e-92 341.7 244 65.6
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 6.4e-92 341.3 217 71.0
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.1e-91 340.5 232 69.4
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.4e-91 340.1 254 63.8
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 2.4e-91 339.3 244 64.8
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 3.2e-91 339.0 221 69.2
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 4.1e-91 338.6 246 66.7
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 5.4e-91 338.2 238 67.6
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 1.2e-90 337.0 217 69.6
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 1.6e-90 336.7 244 66.0
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 2.7e-90 335.9 242 67.4
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 6.0e-90 334.7 241 66.0
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.5e-88 330.1 228 69.3
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.2e-87 327.0 297 57.9
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 1.3e-84 317.0 235 64.3
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 5.1e-81 305.1 200 71.5
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 2.8e-79 299.3 194 76.8
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 4.8e-79 298.5 205 69.3
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 9.0e-78 294.3 194 77.8
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 1.1e-75 287.3 207 69.6
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.3e-71 273.9 236 58.9
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 4.0e-70 268.9 212 60.4
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.4e-67 260.4 215 58.6
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.3e-64 248.8 218 54.6
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 6.7e-57 224.9 141 75.9
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 1.1e-54 217.6 241 51.9
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 6.9e-46 188.3 101 84.2
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 1.0e-41 174.5 214 46.3
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.8e-41 173.7 125 65.6
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 6.7e-41 171.8 210 44.8
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.5e-37 160.6 117 72.6
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 1.0e-36 157.9 106 70.8
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 2.2e-36 156.8 210 43.3
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.6e-34 150.6 213 41.3
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 8.8e-33 144.8 98 76.5
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 8.8e-33 144.8 98 76.5
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.6e-32 143.3 100 70.0
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 5.9e-29 132.1 117 59.0
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 8.5e-28 128.3 114 59.6
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 2.5e-27 126.7 150 50.0
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 2.5e-27 126.7 150 50.0
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.4e-27 124.8 79 77.2
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 5.7e-24 115.5 95 64.2
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 9.7e-24 114.8 62 83.9
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 8.2e-23 111.7 82 67.1
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.1e-19 101.3 190 36.8
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 8.0e-18 95.1 55 80.0
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.5e-16 90.9 171 33.9
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 2.4e-14 83.6 180 32.2
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 2.0e-13 80.5 66 60.6
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 1.8e-09 67.4 75 52.0


User provided reference genes

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