Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 4.6e-49 197.6 100 100.0
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 6.6e-32 140.6 100 74.0
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 9.0e-29 130.2 101 69.3
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.3e-27 126.3 107 63.6
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 3.8e-27 124.8 88 73.9
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 1.9e-26 122.5 95 67.4
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 7.1e-26 120.6 100 60.0
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 1.6e-25 119.4 75 80.0
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 2.7e-25 118.6 91 69.2
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 6.0e-25 117.5 103 58.3
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 7.8e-25 117.1 88 65.9
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 3.0e-24 115.2 87 70.1
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 5.1e-24 114.4 91 69.2
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 6.6e-24 114.0 101 63.4
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 8.7e-24 113.6 100 59.0
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 1.5e-23 112.8 84 67.9
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 3.3e-23 111.7 92 68.5
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 5.6e-23 110.9 90 68.9
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 1.3e-22 109.8 100 61.0
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 1.6e-22 109.4 87 66.7
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.6e-22 109.4 95 63.2
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.6e-22 109.4 100 60.0
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 2.8e-22 108.6 63 82.5
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 4.8e-22 107.8 98 62.2
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 8.1e-22 107.1 100 60.0
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 8.1e-22 107.1 93 60.2
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 8.1e-22 107.1 88 61.4
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 1.1e-21 106.7 61 82.0
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 1.1e-21 106.7 96 60.4
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 1.1e-21 106.7 88 64.8
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 1.4e-21 106.3 88 61.4
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.4e-21 106.3 89 65.2
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 1.4e-21 106.3 88 62.5
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.8e-21 105.9 89 64.0
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.8e-21 105.9 89 64.0
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 3.1e-21 105.1 100 58.0
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.2e-20 103.2 100 53.0
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 3.4e-20 101.7 102 56.9
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 4.5e-20 101.3 88 56.8
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 5.8e-20 100.9 89 61.8
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 7.6e-20 100.5 102 58.8
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 1.3e-19 99.8 101 58.4
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.7e-19 99.4 96 55.2
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 2.2e-19 99.0 85 65.9
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 3.8e-19 98.2 95 58.9
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 4.9e-19 97.8 84 63.1
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 8.4e-19 97.1 88 56.8
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 1.1e-18 96.7 83 61.4
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 1.1e-18 96.7 100 59.0
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.4e-18 96.3 99 55.6
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 1.9e-18 95.9 85 63.5
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 2.4e-18 95.5 65 72.3
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 2.4e-18 95.5 103 53.4
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 3.2e-18 95.1 94 57.4
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 4.2e-18 94.7 88 54.5
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 4.2e-18 94.7 97 51.5
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 4.2e-18 94.7 88 53.4
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 4.2e-18 94.7 89 53.9
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 5.4e-18 94.4 100 60.0
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 5.4e-18 94.4 107 56.1
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.2e-17 93.2 94 56.4
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 1.2e-17 93.2 96 55.2
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 1.2e-17 93.2 96 55.2
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 1.6e-17 92.8 97 51.5
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 4.6e-17 91.3 62 74.2
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 4.6e-17 91.3 62 74.2
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 4.6e-17 91.3 85 55.3
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 6.0e-17 90.9 71 62.0
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 1.3e-16 89.7 98 50.0
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 3.9e-16 88.2 89 50.6
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 3.9e-16 88.2 63 66.7
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 3.9e-16 88.2 100 48.0
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 5.1e-16 87.8 90 56.7
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 5.1e-16 87.8 90 56.7
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 6.7e-16 87.4 93 47.3
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 6.7e-16 87.4 104 54.8
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 6.7e-16 87.4 65 60.0
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 8.7e-16 87.0 103 56.3
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 1.1e-15 86.7 94 58.5
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.9e-15 85.9 90 55.6
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 2.5e-15 85.5 97 54.6
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 4.3e-15 84.7 54 74.1
Rhsim04G0173600 Rhododendron simsii HOM05D005475 ORTHO05D006575 5.6e-15 84.3 128 44.5
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 7.4e-15 84.0 100 47.0
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 9.6e-15 83.6 56 67.9
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 1.3e-14 83.2 96 49.0
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 1.3e-14 83.2 96 49.0
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 1.6e-14 82.8 96 49.0
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 1.6e-14 82.8 67 65.7
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 2.1e-14 82.4 105 54.3
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 2.8e-14 82.0 113 43.4
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 2.8e-14 82.0 97 55.7
TAR365G0748 Trochodendron aralioides HOM05D005475 ORTHO05D006575 2.8e-14 82.0 97 50.5
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 4.8e-14 81.3 95 47.4
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 4.8e-14 81.3 97 48.5
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 8.1e-14 80.5 82 61.0
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 9.0e-13 77.0 94 45.7
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 9.0e-13 77.0 68 60.3
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 1.2e-12 76.6 68 58.8
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 1.2e-12 76.6 125 41.6
Lalb_Chr06g0169471 Lupinus albus HOM05D005475 ORTHO05D006575 1.5e-12 76.3 81 56.8
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 2.6e-12 75.5 54 64.8
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 2.6e-12 75.5 54 72.2
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 3.4e-12 75.1 113 46.0
Nn1g02914 Nelumbo nucifera HOM05D005475 ORTHO05D006575 7.6e-12 73.9 66 62.1
Manes.15G044300 Manihot esculenta HOM05D005475 ORTHO05D006575 1.0e-11 73.6 81 54.3
TPR.G27310 Trifolium pratense HOM05D005475 ORTHO05D006575 1.0e-11 73.6 74 58.1
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 1.3e-11 73.2 54 61.1
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 1.3e-11 73.2 54 61.1
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 1.3e-11 73.2 54 61.1
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 2.2e-11 72.4 54 61.1
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 2.2e-11 72.4 54 61.1
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 2.2e-11 72.4 54 61.1
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 2.2e-11 72.4 54 61.1
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 2.2e-11 72.4 41 80.5
CsaV3_3G011800 Cucumis sativus L. HOM05D005475 ORTHO05D006575 2.9e-11 72.0 68 54.4
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 3.8e-11 71.6 76 55.3
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 4.9e-11 71.2 47 72.3
Sabra10G0040200 Salix brachista HOM05D005475 ORTHO05D006575 4.9e-11 71.2 76 53.9
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 6.5e-11 70.9 54 61.1
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 6.5e-11 70.9 54 61.1
AUR62002181 Chenopodium quinoa HOM05D005475 ORTHO05D006575 6.5e-11 70.9 103 48.5
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 6.5e-11 70.9 80 52.5
AUR62015529 Chenopodium quinoa HOM05D005475 ORTHO05D006575 8.4e-11 70.5 103 48.5
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.1e-10 70.1 47 68.1
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.1e-10 70.1 75 54.7
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 2.5e-10 68.9 53 58.5
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 2.5e-10 68.9 83 54.2
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 5.5e-10 67.8 46 71.7
DCAR_027337 Daucus carota HOM05D005475 ORTHO05D006575 2.1e-09 65.9 83 49.4
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 2.7e-09 65.5 58 56.9
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 2.7e-09 65.5 58 56.9
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 2.7e-09 65.5 58 56.9
Ah.04g155370 Amaranthus hybridus HOM05D005475 ORTHO05D006575 6.0e-09 64.3 91 51.6
Os03g0138400 Oryza sativa ssp. japonica HOM05D005475 ORTHO05D006575 8.7e-08 60.5 106 39.6
unitig_749.g13516 Utricularia gibba HOM05D005475 ORTHO05D006575 1.5e-07 59.7 54 57.4
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 2.5e-07 58.9 74 51.4
Migut.G00489 Erythranthe guttata HOM05D005475 ORTHO05D006575 7.4e-07 57.4 55 58.2
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 1.3e-06 56.6 82 40.2
HPP92_007739 Vanilla planifolia HOM05D005475 ORTHO05D006575 1.3e-06 56.6 39 64.1
ATR0736G038 Amborella trichopoda HOM05D005475 ORTHO05D006575 2.8e-06 55.5 75 50.7
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 3.7e-06 55.1 74 47.3
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 4.8e-06 54.7 80 41.2


User provided reference genes

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