Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv27016 Davidia involucrata HOM05D000141 ORTHO05D018219 3.2e-117 425.6 313 100.0
Dinv36958 Davidia involucrata HOM05D000141 ORTHO05D001311 6.9e-51 205.3 334 58.4
Oeu012260.1 Olea europaea HOM05D000141 ORTHO05D001311 2.4e-48 196.8 314 55.1
Dinv04113 Davidia involucrata HOM05D000141 ORTHO05D018219 6.0e-47 192.2 134 76.9
Dinv02524 Davidia involucrata HOM05D000141 ORTHO05D018219 3.0e-46 189.9 134 76.1
Duzib187G1520 Durio zibethinus HOM05D000141 ORTHO05D001311 7.3e-45 185.3 315 61.0
Thecc.01G087800 Theobroma cacao HOM05D000141 ORTHO05D001311 5.8e-42 175.6 314 58.3
Actinidia25296 Actinidia chinensis HOM05D000141 ORTHO05D018219 2.1e-39 167.2 315 57.5
Gohir.D12G083700 Gossypium hirsutum HOM05D000141 ORTHO05D001311 6.0e-39 165.6 316 57.3
Gorai.008G093800 Gossypium raimondii HOM05D000141 ORTHO05D001311 1.3e-38 164.5 316 57.0
QL06p036404 Quercus lobata HOM05D000141 ORTHO05D001311 1.1e-37 161.4 314 56.1
Cc07_g13820 Coffea canephora HOM05D000141 ORTHO05D001311 5.6e-37 159.1 316 51.9
TAR256G0003 Trochodendron aralioides HOM05D000141 ORTHO05D001311 4.8e-36 156.0 323 58.5
MSTRG.2607 Avicennia marina HOM05D000141 ORTHO05D001311 6.4e-33 145.6 316 48.1
CSS0019102 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001311 1.1e-32 144.8 312 56.4
Nn5g29821 Nelumbo nucifera HOM05D000141 ORTHO05D001311 9.3e-32 141.7 323 56.0
Duzib147G1503 Durio zibethinus HOM05D000141 ORTHO05D001311 1.0e-30 138.3 316 47.8
Cfa006861 Carpinus fangiana HOM05D000141 ORTHO05D001311 1.3e-30 137.9 318 54.7
Haze_03903 Corylus avellana HOM05D000141 ORTHO05D001311 3.0e-30 136.7 344 47.7
Gohir.A12G085600 Gossypium hirsutum HOM05D000141 ORTHO05D001311 6.7e-30 135.6 316 53.8
GSVIVG01003948001 Vitis vinifera HOM05D000141 ORTHO05D001311 1.9e-29 134.0 123 62.6
PGSC0003DMG400016188 Solanum tuberosum HOM05D000141 ORTHO05D001311 3.7e-28 129.8 353 43.1
FAN19G2178 Fragaria x ananassa HOM05D000141 ORTHO05D018219 1.4e-27 127.9 333 46.2
vmacro18541 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 2.4e-27 127.1 133 58.6
Solyc11g010920.3 Solanum lycopersicum HOM05D000141 ORTHO05D001311 4.0e-27 126.3 354 45.5
Sopen11g005660 Solanum pennellii HOM05D000141 ORTHO05D001311 9.0e-27 125.2 354 44.6
Prupe.6G205100 Prunus persica HOM05D000141 ORTHO05D001311 1.2e-26 124.8 331 54.7
Rhsim08G0017900 Rhododendron simsii HOM05D000141 ORTHO05D001311 1.5e-26 124.4 146 54.1
SGA_v2.0_scaffold195G40873 Striga asiatica HOM05D000141 ORTHO05D001311 3.4e-26 123.2 120 59.2
Medtr5g031470 Medicago truncatula HOM05D000141 ORTHO05D001311 7.6e-26 122.1 321 48.9
FAN28G1133 Fragaria x ananassa HOM05D000141 ORTHO05D001311 2.2e-25 120.6 140 52.1
FAN26G0872 Fragaria x ananassa HOM05D000141 ORTHO05D001311 3.8e-25 119.8 140 52.9
CAN.G1813.5 Capsicum annuum HOM05D000141 ORTHO05D001311 4.9e-25 119.4 351 47.0
FvH4_1g19311 Fragaria vesca HOM05D000141 ORTHO05D001311 4.9e-25 119.4 137 53.3
FAN19G0828 Fragaria x ananassa HOM05D000141 ORTHO05D001311 4.9e-25 119.4 137 53.3
Lju188C9T2 Lonicera japonica HOM05D000141 ORTHO05D001311 4.9e-25 119.4 119 60.5
DCAR_003440 Daucus carota HOM05D000141 ORTHO05D001311 1.6e-23 114.4 316 43.0
RcHm_v2.0_Chr2g0110681 Rosa chinensis HOM05D000141 ORTHO05D001311 3.5e-23 113.2 120 55.0
CiPaw.07G045600 Carya illinoinensis HOM05D000141 ORTHO05D001311 7.9e-23 112.1 334 52.4
Ciclev10024772m.g Citrus clementina HOM05D000141 ORTHO05D001311 7.9e-23 112.1 118 58.5
FAN23G2724 Fragaria x ananassa HOM05D000141 ORTHO05D001311 7.9e-23 112.1 120 55.8
TWI53G1166 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 7.9e-23 112.1 316 49.1
TWI74G0124 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 5.1e-22 109.4 316 52.8
COL.COLO4_27381 Corchorus olitorius HOM05D000141 ORTHO05D001311 8.7e-22 108.6 224 52.2
TAR625G0953 Trochodendron aralioides HOM05D000141 ORTHO05D001311 2.5e-21 107.1 131 52.7
Manes.13G102000 Manihot esculenta HOM05D000141 ORTHO05D001311 4.3e-21 106.3 318 53.1
Lsat_1_v5_gn_2_69721 Lactuca sativa HOM05D000141 ORTHO05D001311 1.3e-20 104.8 324 46.0
PGR031G0460 Punica granatum HOM05D000141 ORTHO05D001311 2.8e-20 103.6 318 46.5
CANSAT01G3278 Cannabis sativa HOM05D000141 ORTHO05D001311 2.4e-19 100.5 145 49.0
Psat2g091360 Pisum sativum HOM05D000141 ORTHO05D001311 2.4e-19 100.5 319 43.6
TPR.G28814 Trifolium pratense HOM05D000141 ORTHO05D001311 6.9e-19 99.0 320 51.9
Atru.chr3.1212 Acer truncatum HOM05D000141 ORTHO05D001311 9.0e-19 98.6 127 55.9
Hund14076 Selenicereus undatus HOM05D000141 ORTHO05D001311 2.0e-18 97.4 138 43.5
HanXRQChr07g0188821 Helianthus annuus HOM05D000141 ORTHO05D001311 7.7e-18 95.5 319 47.3
Lalb_Chr09g0325901 Lupinus albus HOM05D000141 ORTHO05D001311 1.0e-17 95.1 127 48.0
Eucgr.I00567 Eucalyptus grandis HOM05D000141 ORTHO05D001311 1.7e-17 94.4 139 46.0
AUR62018001 Chenopodium quinoa HOM05D000141 ORTHO05D001311 2.2e-17 94.0 135 46.7
AUR62003690 Chenopodium quinoa HOM05D000141 ORTHO05D001311 3.8e-17 93.2 135 46.7
Lj2g0018682 Lotus japonicus HOM05D000141 ORTHO05D001311 1.4e-16 91.3 317 49.8
Phvul.002G145000 Phaseolus vulgaris HOM05D000141 ORTHO05D001311 1.4e-16 91.3 126 48.4
Cpa.g.sc55.4 Carica papaya HOM05D000141 ORTHO05D001311 1.9e-16 90.9 340 47.4
Nitab4.5_0000402g0070 Nicotiana tabacum HOM05D000141 ORTHO05D001311 2.5e-16 90.5 151 44.4
Atru.chr13.980 Acer truncatum HOM05D000141 ORTHO05D001311 7.2e-16 89.0 323 38.7
Lalb_Chr16g0381571 Lupinus albus HOM05D000141 ORTHO05D001311 9.4e-16 88.6 133 43.6
Ca_25221_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001311 4.6e-15 86.3 321 47.7
RcHm_v2.0_Chr7g0234871 Rosa chinensis HOM05D000141 ORTHO05D001311 7.9e-15 85.5 315 36.5
Migut.H02276 Erythranthe guttata HOM05D000141 ORTHO05D001311 2.3e-14 84.0 136 46.3
VMungo1215G1944 Vigna mungo HOM05D000141 ORTHO05D001311 3.3e-13 80.1 321 49.8
AT2G22610 Arabidopsis thaliana HOM05D000141 ORTHO05D001311 4.3e-13 79.7 323 44.9
CDE02G4125 Ceratophyllum demersum HOM05D000141 ORTHO05D001311 4.3e-13 79.7 330 37.0
Aqoxy6G01483 Aquilegia oxysepala HOM05D000141 ORTHO05D001311 9.7e-13 78.6 331 41.7
Peaxi162Scf00085g00531 Petunia axillaris HOM05D000141 ORTHO05D001311 9.7e-13 78.6 143 39.2
arahy.Tifrunner.gnm1.ann1.87KB7U Arachis hypogaea HOM05D000141 ORTHO05D001311 2.2e-12 77.4 119 48.7
arahy.Tifrunner.gnm1.ann1.DW36QZ Arachis hypogaea HOM05D000141 ORTHO05D001311 2.2e-12 77.4 119 48.7
Glyma.01G021200 Glycine max HOM05D000141 ORTHO05D001311 2.8e-12 77.0 136 41.2
Ah.03g143250 Amaranthus hybridus HOM05D000141 ORTHO05D001311 8.2e-12 75.5 312 46.8
FAN18G0148 Fragaria x ananassa HOM05D000141 ORTHO05D001311 2.4e-11 73.9 315 32.7
Sc16g0000650 Simmondsia chinensis HOM05D000141 ORTHO05D001311 2.4e-11 73.9 131 39.7
GSVIVG01009205001 Vitis vinifera HOM05D000141 ORTHO05D001311 3.1e-11 73.6 318 38.1
FvH4_5g34300 Fragaria vesca HOM05D000141 ORTHO05D001311 6.9e-11 72.4 315 34.9
Actinidia29658 Actinidia chinensis HOM05D000141 ORTHO05D038012 9.1e-11 72.0 111 43.2
Carub.0004s0176 Capsella rubella HOM05D000141 ORTHO05D001311 1.2e-10 71.6 354 35.9
QL09p018403 Quercus lobata HOM05D000141 ORTHO05D001311 1.2e-10 71.6 136 36.8
Glyma.09G200800 Glycine max HOM05D000141 ORTHO05D001311 2.6e-10 70.5 333 47.4
Actinidia19618 Actinidia chinensis HOM05D000141 ORTHO05D001311 3.4e-10 70.1 123 41.5
Peaxi162Scf01414g00011 Petunia axillaris HOM05D000141 ORTHO05D001311 4.5e-10 69.7 132 37.9
CARHR113830 Cardamine hirsuta HOM05D000141 ORTHO05D001311 5.9e-10 69.3 343 38.5
Cfa013813 Carpinus fangiana HOM05D000141 ORTHO05D001311 5.9e-10 69.3 141 32.6
Lj4A86G78 Lonicera japonica HOM05D000141 ORTHO05D001311 7.7e-10 68.9 123 40.7
Sc16g0001020 Simmondsia chinensis HOM05D000141 ORTHO05D018219 7.7e-10 68.9 134 38.1
ATR0767G147 Amborella trichopoda HOM05D000141 ORTHO05D001311 1.0e-09 68.6 320 36.6
HanXRQChr14g0444581 Helianthus annuus HOM05D000141 ORTHO05D001311 1.0e-09 68.6 143 42.0
BcaC07g41046 Brassica carinata HOM05D000141 ORTHO05D001311 1.3e-09 68.2 120 40.8
Cc10_g08390 Coffea canephora HOM05D000141 ORTHO05D001311 1.7e-09 67.8 103 45.6
Lalb_Chr05g0216241 Lupinus albus HOM05D000141 ORTHO05D018219 1.7e-09 67.8 123 39.0
C08p40470 Brassica napus HOM05D000141 ORTHO05D001311 2.2e-09 67.4 344 36.9
BolC8t51618H Brassica oleracea HOM05D000141 ORTHO05D001311 2.2e-09 67.4 344 36.9
FAN08G1721 Fragaria x ananassa HOM05D000141 ORTHO05D001311 2.2e-09 67.4 315 34.6
THA.LOC104807667 Tarenaya hassleriana HOM05D000141 ORTHO05D001311 2.2e-09 67.4 333 39.9
Ciclev10000147m.g Citrus clementina HOM05D000141 ORTHO05D001311 2.9e-09 67.0 324 37.3
Haze_22487 Corylus avellana HOM05D000141 ORTHO05D001311 3.8e-09 66.6 141 33.3
Aa31LG6G14950 Aethionema arabicum HOM05D000141 ORTHO05D001311 5.0e-09 66.2 135 43.0
Sp4g01650 Schrenkiella parvula HOM05D000141 ORTHO05D001311 1.1e-08 65.1 343 39.9
A09p57390 Brassica napus HOM05D000141 ORTHO05D001311 1.9e-08 64.3 345 37.7
BraA09t41131Z Brassica rapa HOM05D000141 ORTHO05D001311 1.9e-08 64.3 345 37.7
CSS0024215 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001311 1.9e-08 64.3 114 43.0
vmacro04637 Vaccinium macrocarpon HOM05D000141 ORTHO05D038012 1.9e-08 64.3 109 44.0
Rhsim07G0213200 Rhododendron simsii HOM05D000141 ORTHO05D001311 2.5e-08 63.9 113 41.6
Thecc.08G073700 Theobroma cacao HOM05D000141 ORTHO05D001311 3.2e-08 63.5 321 35.5
Duzib093G0423 Durio zibethinus HOM05D000141 ORTHO05D001311 4.2e-08 63.2 125 33.6
MD08G1202900 Malus domestica HOM05D000141 ORTHO05D001311 9.4e-08 62.0 323 41.8
unitig_62.g23414 Utricularia gibba HOM05D000141 ORTHO05D001311 9.4e-08 62.0 119 44.5
VMungo1215G3290 Vigna mungo HOM05D009237 ORTHO05D018219 9.4e-08 62.0 50 62.0
CiPaw.07G163200 Carya illinoinensis HOM05D000141 ORTHO05D001311 3.6e-07 60.1 324 34.3
AL4G12150 Arabidopsis lyrata HOM05D000141 ORTHO05D001311 1.0e-06 58.5 116 40.5
ECA238G1069 Erigeron canadensis HOM05D000141 ORTHO05D001311 1.4e-06 58.2 121 40.5
Thhalv10000025m.g Eutrema salsugineum HOM05D000141 ORTHO05D001311 2.3e-06 57.4 321 44.2


User provided reference genes

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